Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022385 Camellia sinensis var. sinensis HOM05D007414 ORTHO05D009482 1.0e-241 839.7 453 100.0
vmacro12698 Vaccinium macrocarpon HOM05D007414 ORTHO05D009482 8.1e-186 654.1 385 82.3
Actinidia02265 Actinidia chinensis HOM05D007414 ORTHO05D009482 1.8e-185 652.9 379 85.2
Rhsim01G0124300 Rhododendron simsii HOM05D007414 ORTHO05D009482 1.8e-169 599.7 382 79.6
Hma1.2p1_1202F.1_g266840 Hydrangea macrophylla HOM05D007414 ORTHO05D009482 8.4e-167 590.9 385 76.6
TAR623G0974 Trochodendron aralioides HOM05D007414 ORTHO05D009482 8.7e-164 580.9 377 78.0
Dinv22037 Davidia involucrata HOM05D007414 ORTHO05D009482 2.5e-163 579.3 411 73.5
GSVIVG01013487001 Vitis vinifera HOM05D007414 ORTHO05D009482 1.1e-161 573.9 388 76.3
MSTRG.20514 Avicennia marina HOM05D007414 ORTHO05D009482 1.3e-159 567.0 386 74.1
CiPaw.13G013700 Carya illinoinensis HOM05D007414 ORTHO05D009482 1.7e-159 566.6 393 73.3
QL04p017831 Quercus lobata HOM05D007414 ORTHO05D009482 2.4e-158 562.8 399 72.2
Nn7g36686 Nelumbo nucifera HOM05D007414 ORTHO05D009482 7.1e-158 561.2 375 75.5
COL.COLO4_20658 Corchorus olitorius HOM05D007414 ORTHO05D009482 2.1e-157 559.7 393 72.8
MD02G1287000 Malus domestica HOM05D007414 ORTHO05D009482 6.0e-157 558.1 386 74.4
Solyc01g096400.4 Solanum lycopersicum HOM05D007414 ORTHO05D009482 5.1e-156 555.1 371 74.4
Sopen01g040130 Solanum pennellii HOM05D007414 ORTHO05D009482 8.7e-156 554.3 371 74.1
RcHm_v2.0_Chr1g0324301 Rosa chinensis HOM05D007414 ORTHO05D009482 7.4e-155 551.2 371 74.9
PGSC0003DMG400018334 Solanum tuberosum HOM05D007414 ORTHO05D009482 7.4e-155 551.2 371 73.3
CANSAT56G3550 Cannabis sativa HOM05D007414 ORTHO05D009482 2.1e-154 549.7 373 74.3
FAN03G2686 Fragaria x ananassa HOM05D007414 ORTHO05D009482 2.8e-154 549.3 372 73.7
FvH4_7g03070 Fragaria vesca HOM05D006097 ORTHO05D008538 6.2e-154 548.1 372 73.4
FAN06G2659 Fragaria x ananassa HOM05D007414 ORTHO05D009482 6.2e-154 548.1 372 73.4
FAN10G2712 Fragaria x ananassa HOM05D007414 ORTHO05D009482 3.1e-153 545.8 372 73.1
Nitab4.5_0004955g0030 Nicotiana tabacum HOM05D007414 ORTHO05D009482 3.1e-153 545.8 371 73.6
Duzib114G0511 Durio zibethinus HOM05D007414 ORTHO05D009482 5.3e-153 545.0 389 70.7
Atru.chr12.1333 Acer truncatum HOM05D007414 ORTHO05D009482 2.6e-152 542.7 400 70.5
Thecc.10G154500 Theobroma cacao HOM05D007414 ORTHO05D009482 2.6e-152 542.7 414 68.1
Cc02_g30210 Coffea canephora HOM05D007414 ORTHO05D009482 3.8e-151 538.9 377 72.1
Manes.11G006000 Manihot esculenta HOM05D007414 ORTHO05D009482 1.6e-149 533.5 388 69.8
Nitab4.5_0000307g0260 Nicotiana tabacum HOM05D007414 ORTHO05D009482 1.6e-149 533.5 369 73.4
Potri.001G027600 Populus trichocarpa HOM05D007414 ORTHO05D009482 7.9e-149 531.2 389 70.4
Gorai.010G216100 Gossypium raimondii HOM05D007414 ORTHO05D009482 1.0e-148 530.8 373 71.8
CAN.G1045.37 Capsicum annuum HOM05D007414 ORTHO05D009482 1.8e-148 530.0 370 72.2
DCAR_031835 Daucus carota HOM05D007414 ORTHO05D009482 5.1e-148 528.5 366 73.0
Lsat_1_v5_gn_4_29901 Lactuca sativa HOM05D007414 ORTHO05D009482 2.2e-146 523.1 380 69.5
Eucgr.G03234 Eucalyptus grandis HOM05D007414 ORTHO05D009482 6.3e-146 521.5 393 67.9
Gorai.011G215300 Gossypium raimondii HOM05D007414 ORTHO05D009482 1.1e-145 520.8 423 65.2
Gohir.D10G192600 Gossypium hirsutum HOM05D007414 ORTHO05D009482 1.8e-145 520.0 393 68.7
CsaV3_5G024500 Cucumis sativus L. HOM05D007414 ORTHO05D009482 2.4e-145 519.6 387 68.2
Medtr3g014680 Medicago truncatula HOM05D007414 ORTHO05D009482 5.9e-144 515.0 393 67.9
VMungo1080G1369 Vigna mungo HOM05D007414 ORTHO05D009482 1.0e-143 514.2 374 70.3
Gohir.A10G185400 Gossypium hirsutum HOM05D007414 ORTHO05D009482 2.2e-143 513.1 414 65.2
Sabra01G0020000 Salix brachista HOM05D007414 ORTHO05D009482 2.2e-143 513.1 421 65.1
Glyma.04G137000 Glycine max HOM05D007414 ORTHO05D009482 2.9e-143 512.7 374 70.3
Phvul.005G026400 Phaseolus vulgaris HOM05D007414 ORTHO05D009482 2.9e-143 512.7 374 70.1
TWI15G0498 Tripterygium wilfordii HOM05D007414 ORTHO05D009482 3.8e-143 512.3 374 70.3
Glyma.11G155300 Glycine max HOM05D007414 ORTHO05D009482 1.4e-142 510.4 374 69.5
HanXRQChr16g0525321 Helianthus annuus HOM05D007414 ORTHO05D009482 2.5e-142 509.6 381 68.5
Lalb_Chr25g0282101 Lupinus albus HOM05D007414 ORTHO05D009482 2.5e-142 509.6 374 69.5
PGR031G2549 Punica granatum HOM05D007414 ORTHO05D009482 4.2e-142 508.8 373 70.0
Lj3g0021878 Lotus japonicus HOM05D007414 ORTHO05D009482 7.2e-142 508.1 371 70.1
arahy.Tifrunner.gnm1.ann1.XZAR1L Arachis hypogaea HOM05D007414 ORTHO05D009482 1.4e-140 503.8 391 66.5
Ciclev10028543m.g Citrus clementina HOM05D007414 ORTHO05D009482 1.4e-140 503.8 374 69.8
ECA234G1800 Erigeron canadensis HOM05D007414 ORTHO05D009482 1.8e-140 503.4 389 67.4
arahy.Tifrunner.gnm1.ann1.GMDI7B Arachis hypogaea HOM05D007414 ORTHO05D009482 3.9e-140 502.3 391 66.8
MELO3C005149.2 Cucumis melo HOM05D007414 ORTHO05D009482 3.1e-137 492.7 415 62.7
ClCG01G007530 Citrullus lanatus HOM05D007414 ORTHO05D009482 4.5e-136 488.8 389 64.8
Peaxi162Scf00767g00524 Petunia axillaris HOM05D007414 ORTHO05D009482 2.1e-133 479.9 332 72.3
AUR62032647 Chenopodium quinoa HOM05D007414 ORTHO05D009482 1.1e-131 474.2 381 64.0
PSO339G0457 Papaver somniferum HOM05D007414 ORTHO05D009482 1.1e-131 474.2 393 63.4
PSO384G0147 Papaver somniferum HOM05D007414 ORTHO05D009482 1.5e-131 473.8 393 63.4
Manes.15G192920 Manihot esculenta HOM05D007414 ORTHO05D009482 7.0e-129 464.9 374 65.5
Gohir.D06G184800 Gossypium hirsutum HOM05D007414 ORTHO05D009482 1.3e-127 460.7 312 73.7
Sc11g0006450 Simmondsia chinensis HOM05D007414 ORTHO05D009482 2.9e-127 459.5 382 64.9
THA.LOC104826727 Tarenaya hassleriana HOM05D007414 ORTHO05D009482 2.9e-127 459.5 383 62.4
Gohir.A06G174800 Gossypium hirsutum HOM05D007414 ORTHO05D009482 7.2e-126 454.9 312 72.8
Aqoxy1G00360 Aquilegia oxysepala HOM05D007414 ORTHO05D009482 2.7e-125 453.0 389 62.2
Nn7g36678 Nelumbo nucifera HOM05D007414 ORTHO05D009482 3.6e-125 452.6 358 67.6
Sed0006433 Sechium edule HOM05D007414 ORTHO05D009482 3.0e-124 449.5 325 67.4
Potri.003G196200 Populus trichocarpa HOM05D007414 ORTHO05D009482 2.6e-123 446.4 389 60.4
Haze_03038 Corylus avellana HOM05D007414 ORTHO05D009482 8.2e-122 441.4 378 64.3
Ah.12g062800 Amaranthus hybridus HOM05D007414 ORTHO05D009482 1.4e-121 440.7 349 64.5
EL10Ac2g02800 Beta vulgaris HOM05D007414 ORTHO05D009482 2.0e-120 436.8 415 57.1
ATR0745G014 Amborella trichopoda HOM05D007414 ORTHO05D009482 2.8e-114 416.4 379 60.2
Hund13359 Selenicereus undatus HOM05D007414 ORTHO05D009482 6.3e-114 415.2 382 58.1
Dinv32026 Davidia involucrata HOM05D007414 ORTHO05D009482 4.5e-112 409.1 265 77.7
AUR62026859 Chenopodium quinoa HOM05D007414 ORTHO05D009482 7.7e-104 381.7 304 63.5
Psat5g222240 Pisum sativum HOM05D007414 ORTHO05D009482 2.6e-99 366.7 289 66.1
SEGI_40936 Sequoiadendron giganteum HOM05D007414 ORTHO05D009482 1.7e-98 364.0 391 50.6
Migut.O00949 Erythranthe guttata HOM05D007414 ORTHO05D009482 1.4e-97 360.9 256 73.8
Prupe.2G036300 Prunus persica HOM05D007414 ORTHO05D009482 9.2e-97 358.2 258 70.9
MBI19_g25612_MAGBIO Magnolia biondii HOM05D007414 ORTHO05D009482 6.2e-77 292.4 216 69.9
AagrBONN_evm.TU.Sc2ySwM_362.1466 Anthoceros agrestis HOM05D007414 ORTHO05D009482 1.1e-70 271.6 385 42.6
Pp3c11_910 Physcomitrium patens HOM05D007414 ORTHO05D009482 1.9e-65 254.2 392 41.3
Mapoly0007s0139 Marchantia polymorpha HOM05D007414 ORTHO05D009482 3.5e-64 250.0 408 39.7
DCAR_000332 Daucus carota HOM05D007414 ORTHO05D009482 3.4e-59 233.4 162 74.7
Zm00001eb128490 Zea mays HOM05D007414 ORTHO05D009482 9.3e-57 225.3 206 59.7
Os01g0272800 Oryza sativa ssp. japonica HOM05D007414 ORTHO05D009482 5.1e-55 219.5 210 56.7
Migut.B01233 Erythranthe guttata HOM05D007414 ORTHO05D009482 3.4e-43 180.3 137 67.2
Nitab4.5_0008639g0030 Nicotiana tabacum HOM05D007414 ORTHO05D009482 7.9e-40 169.1 133 64.7
TPR.G1409 Trifolium pratense HOM05D007414 ORTHO05D009482 1.0e-39 168.7 132 63.6
Lsat_1_v5_gn_0_2021 Lactuca sativa HOM05D007414 ORTHO05D009482 1.7e-18 98.2 77 62.3
Lsat_1_v5_gn_3_3821 Lactuca sativa HOM05D007414 ORTHO05D009482 2.2e-13 81.3 64 57.8
PRCOL_00005884 Prasinoderma coloniale HOM05D007414 ORTHO05D009482 9.1e-12 75.9 255 27.1
MD02G1286500 Malus domestica HOM05D007414 ORTHO05D009482 3.5e-11 73.9 69 58.0
Oeu014631.1 Olea europaea HOM05D007414 ORTHO05D009482 5.0e-10 70.1 49 73.5
TPR.G34603 Trifolium pratense HOM05D007414 ORTHO05D009482 2.1e-08 64.7 49 65.3
SEGI_36011 Sequoiadendron giganteum HOM05D007414 ORTHO05D009482 3.6e-08 63.9 69 46.4
PRCOL_00006348 Prasinoderma coloniale HOM05D007414 ORTHO05D333730 8.0e-08 62.8 106 38.7
Sabra03G0146300 Salix brachista HOM05D007414 ORTHO05D009482 8.0e-08 62.8 50 60.0
Cre03.g145067 Chlamydomonas reinhardtii HOM05D007414 ORTHO05D009482 6.7e-07 59.7 76 43.4
ECA240G1264 Erigeron canadensis HOM05D006098 ORTHO05D007470 6.7e-07 59.7 381 23.6
HanXRQChr17g0537231 Helianthus annuus HOM05D006098 ORTHO05D007470 1.5e-06 58.5 393 24.7
Cpa.g.sc71.63 Carica papaya HOM05D006098 ORTHO05D007470 2.6e-06 57.8 274 27.0
Migut.A00537 Erythranthe guttata HOM05D006098 ORTHO05D007470 2.6e-06 57.8 371 22.4
Lsat_1_v5_gn_3_19721 Lactuca sativa HOM05D006098 ORTHO05D007470 3.3e-06 57.4 271 25.8
Nn7g37397 Nelumbo nucifera HOM05D006098 ORTHO05D007470 3.3e-06 57.4 398 24.6
Oeu042191.1 Olea europaea HOM05D006098 ORTHO05D007470 7.4e-06 56.2 278 24.1
Oeu042192.1 Olea europaea HOM05D006098 ORTHO05D007470 7.4e-06 56.2 278 24.1
Nitab4.5_0011712g0010 Nicotiana tabacum HOM05D006098 ORTHO05D007470 9.7e-06 55.8 282 25.2
Oeu057164.1 Olea europaea HOM05D006098 ORTHO05D007470 9.7e-06 55.8 278 23.7


User provided reference genes

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