Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022363 Camellia sinensis var. sinensis HOM05D006576 ORTHO05D008644 0.0e+00 1521.1 725 100.0
CSS0029857 Camellia sinensis var. sinensis HOM05D006576 ORTHO05D008644 0.0e+00 1198.7 671 87.6
Rhsim06G0035200 Rhododendron simsii HOM05D006576 ORTHO05D008644 0.0e+00 1161.7 760 75.5
Peaxi162Scf00690g00125 Petunia axillaris HOM05D006576 ORTHO05D008644 0.0e+00 1136.7 724 75.3
Hma1.2p1_0203F.1_g086540 Hydrangea macrophylla HOM05D006576 ORTHO05D008644 0.0e+00 1129.0 724 74.6
Gorai.002G129100 Gossypium raimondii HOM05D006576 ORTHO05D008644 0.0e+00 1127.9 724 73.5
Nitab4.5_0012039g0010 Nicotiana tabacum HOM05D006576 ORTHO05D008644 0.0e+00 1127.5 730 74.8
Gohir.D01G105100 Gossypium hirsutum HOM05D006576 ORTHO05D008644 0.0e+00 1126.3 724 73.3
CAN.G1126.39 Capsicum annuum HOM05D006576 ORTHO05D008644 0.0e+00 1123.2 721 74.8
Lj4A42T76 Lonicera japonica HOM05D006576 ORTHO05D008644 0.0e+00 1122.1 740 74.1
MSTRG.25158 Avicennia marina HOM05D006576 ORTHO05D008644 0.0e+00 1121.3 723 73.7
Gohir.A01G116700 Gossypium hirsutum HOM05D006576 ORTHO05D008644 0.0e+00 1120.1 724 73.3
Solyc04g080140.4 Solanum lycopersicum HOM05D006576 ORTHO05D008644 0.0e+00 1120.1 725 73.9
Sopen04g033720 Solanum pennellii HOM05D006576 ORTHO05D008644 0.0e+00 1119.8 725 73.9
Thecc.08G024000 Theobroma cacao HOM05D006576 ORTHO05D008644 0.0e+00 1118.6 715 74.4
Migut.C00705 Erythranthe guttata HOM05D006576 ORTHO05D008644 0.0e+00 1115.9 724 72.5
Actinidia15312 Actinidia chinensis HOM05D006576 ORTHO05D008644 0.0e+00 1115.5 688 78.6
Cc10_g03100 Coffea canephora HOM05D006576 ORTHO05D008644 0.0e+00 1114.4 723 72.9
HanXRQChr04g0105541 Helianthus annuus HOM05D006576 ORTHO05D008644 0.0e+00 1114.4 721 74.1
Manes.11G048300 Manihot esculenta HOM05D006576 ORTHO05D008644 0.0e+00 1112.1 724 73.9
TAR381G1568 Trochodendron aralioides HOM05D006576 ORTHO05D008644 0.0e+00 1110.1 725 72.6
RcHm_v2.0_Chr6g0300731 Rosa chinensis HOM05D006576 ORTHO05D008644 0.0e+00 1109.7 723 72.9
Haze_17991 Corylus avellana HOM05D006576 ORTHO05D008644 0.0e+00 1108.2 796 68.6
Glyma.06G033200 Glycine max HOM05D006576 ORTHO05D008644 0.0e+00 1106.7 725 72.1
Nitab4.5_0000110g0470 Nicotiana tabacum HOM05D006576 ORTHO05D008644 0.0e+00 1103.2 723 74.4
FvH4_2g40020 Fragaria vesca HOM05D006576 ORTHO05D008644 0.0e+00 1102.0 723 71.9
SalBow7G4023 Salvia bowleyana HOM05D006576 ORTHO05D008644 0.0e+00 1101.3 742 71.4
Phvul.009G056900 Phaseolus vulgaris HOM05D006576 ORTHO05D008644 0.0e+00 1097.8 725 71.3
COL.COLO4_26345 Corchorus olitorius HOM05D006576 ORTHO05D008644 0.0e+00 1096.6 724 72.0
Lalb_Chr11g0062371 Lupinus albus HOM05D006576 ORTHO05D008644 0.0e+00 1096.6 724 72.5
VMungo1309G2241 Vigna mungo HOM05D006576 ORTHO05D008644 0.0e+00 1095.1 725 71.0
MD15G1029800 Malus domestica HOM05D006576 ORTHO05D008644 0.0e+00 1094.3 725 71.3
TWI36G0276 Tripterygium wilfordii HOM05D006576 ORTHO05D008644 0.0e+00 1093.2 724 71.5
Cpa.g.sc64.67 Carica papaya HOM05D006576 ORTHO05D008644 0.0e+00 1092.4 723 71.8
vmacro21626 Vaccinium macrocarpon HOM05D006576 ORTHO05D008644 0.0e+00 1092.4 876 64.3
DCAR_019521 Daucus carota HOM05D006576 ORTHO05D008644 0.0e+00 1091.6 726 72.9
QL02p007885 Quercus lobata HOM05D006576 ORTHO05D008644 0.0e+00 1089.3 770 69.2
arahy.Tifrunner.gnm1.ann1.N2LUF1 Arachis hypogaea HOM05D006576 ORTHO05D008644 0.0e+00 1087.8 723 71.5
arahy.Tifrunner.gnm1.ann1.G51JN1 Arachis hypogaea HOM05D006576 ORTHO05D008644 0.0e+00 1085.9 723 71.4
FAN27G3021 Fragaria x ananassa HOM05D006576 ORTHO05D008644 0.0e+00 1085.9 723 71.2
Lsat_1_v5_gn_1_17900 Lactuca sativa HOM05D006576 ORTHO05D008644 0.0e+00 1083.9 716 73.2
Ciclev10003149m.g Citrus clementina HOM05D006576 ORTHO05D008644 0.0e+00 1081.6 722 71.2
MD08G1033200 Malus domestica HOM05D006576 ORTHO05D008644 0.0e+00 1079.7 725 70.1
CsaV3_3G044990 Cucumis sativus L. HOM05D006576 ORTHO05D008644 0.0e+00 1077.8 725 70.6
TWI12G0537 Tripterygium wilfordii HOM05D006576 ORTHO05D008644 0.0e+00 1077.8 724 70.7
CiPaw.16G055000 Carya illinoinensis HOM05D006576 ORTHO05D008644 0.0e+00 1076.6 722 71.2
Lj1g0002309 Lotus japonicus HOM05D006576 ORTHO05D008644 0.0e+00 1076.6 725 69.8
MELO3C003867.2 Cucumis melo HOM05D006576 ORTHO05D008644 6.0e-311 1070.5 725 70.1
Medtr3g111730 Medicago truncatula HOM05D006576 ORTHO05D008644 7.4e-311 1070.1 723 69.6
Prupe.1G381700 Prunus persica HOM05D006576 ORTHO05D008644 9.9e-311 1069.7 723 70.8
GSVIVG01009681001 Vitis vinifera HOM05D006576 ORTHO05D008644 9.9e-311 1069.7 723 71.4
ClCG05G019150 Citrullus lanatus HOM05D006576 ORTHO05D008644 1.7e-310 1068.9 718 70.3
Potri.014G180700 Populus trichocarpa HOM05D006576 ORTHO05D008644 3.8e-310 1067.8 729 70.6
ECA247G3618 Erigeron canadensis HOM05D006576 ORTHO05D008644 6.4e-310 1067.0 697 74.0
SGA_v2.0_scaffold24G10239 Striga asiatica HOM05D006576 ORTHO05D008644 6.4e-310 1067.0 717 71.1
Sed0024937 Sechium edule HOM05D006576 ORTHO05D008644 7.8e-308 1060.1 725 69.7
Atru.BG.235.p Acer truncatum HOM05D006576 ORTHO05D008644 1.7e-307 1058.9 718 72.0
Nn1g05071 Nelumbo nucifera HOM05D006576 ORTHO05D008644 3.9e-307 1057.7 723 69.6
Ca_15522_v3 Cicer arietinum L. HOM05D006576 ORTHO05D008644 6.6e-307 1057.0 715 69.8
PGR083G0445 Punica granatum HOM05D006576 ORTHO05D008644 1.2e-305 1052.7 721 69.6
Sabra14G0140900 Salix brachista HOM05D006576 ORTHO05D008644 2.1e-305 1052.0 727 69.7
Atru.chr13.516 Acer truncatum HOM05D006576 ORTHO05D008644 1.4e-304 1049.3 723 70.5
EL10Ac1g01831 Beta vulgaris HOM05D006576 ORTHO05D008644 2.9e-302 1041.6 724 67.7
THA.LOC104822840 Tarenaya hassleriana HOM05D006576 ORTHO05D008644 5.4e-301 1037.3 720 69.0
Hund26593 Selenicereus undatus HOM05D006576 ORTHO05D008644 1.6e-300 1035.8 716 68.3
FAN20G0603 Fragaria x ananassa HOM05D006576 ORTHO05D008644 2.1e-300 1035.4 723 68.6
Glyma.04G033200 Glycine max HOM05D006576 ORTHO05D008644 1.7e-299 1032.3 576 81.4
Psat0s4808g0040 Pisum sativum HOM05D006576 ORTHO05D008644 8.7e-299 1030.0 741 66.0
Eucgr.F01554 Eucalyptus grandis HOM05D006576 ORTHO05D008644 2.4e-296 1021.9 729 67.6
AUR62033848 Chenopodium quinoa HOM05D006576 ORTHO05D008644 2.0e-295 1018.8 724 67.0
Ah.05g167470 Amaranthus hybridus HOM05D006576 ORTHO05D008644 4.5e-295 1017.7 724 66.6
Sp1g33910 Schrenkiella parvula HOM05D006576 ORTHO05D008644 1.6e-292 1009.2 722 67.2
BcaB04g17577 Brassica carinata HOM05D006576 ORTHO05D008644 4.6e-292 1007.7 722 66.3
Aqoxy6G01046 Aquilegia oxysepala HOM05D006576 ORTHO05D008644 6.0e-292 1007.3 724 66.4
CANSAT25G2025 Cannabis sativa HOM05D006576 ORTHO05D008644 1.3e-291 1006.1 606 78.1
Carub.0001s3555 Capsella rubella HOM05D006576 ORTHO05D008644 1.8e-291 1005.7 719 67.0
BraA08t32625Z Brassica rapa HOM05D006576 ORTHO05D008644 2.3e-291 1005.4 722 66.5
A08p06220 Brassica napus HOM05D006576 ORTHO05D008644 3.0e-291 1005.0 722 66.5
Thhalv10011304m.g Eutrema salsugineum HOM05D006576 ORTHO05D008644 1.9e-290 1002.3 722 66.2
AT1G45150 Arabidopsis thaliana HOM05D006576 ORTHO05D008644 4.3e-290 1001.1 722 66.3
BcaC07g37274 Brassica carinata HOM05D006576 ORTHO05D008644 2.6e-287 991.9 722 66.1
C08p07030 Brassica napus HOM05D006576 ORTHO05D008644 2.6e-287 991.9 722 66.1
BolC8t47545H Brassica oleracea HOM05D006576 ORTHO05D008644 2.6e-287 991.9 722 66.1
PSO675G1390 Papaver somniferum HOM05D006576 ORTHO05D008644 2.6e-287 991.9 722 65.9
ATR0733G192 Amborella trichopoda HOM05D006576 ORTHO05D008644 2.8e-281 971.8 722 64.1
PSO541G0394 Papaver somniferum HOM05D006576 ORTHO05D008644 7.1e-277 957.2 722 64.5
Duzib093G2111 Durio zibethinus HOM05D006576 ORTHO05D008644 5.7e-274 947.6 725 64.3
Os07g0581300 Oryza sativa ssp. japonica HOM05D006576 ORTHO05D008644 1.6e-273 946.0 723 62.5
AL1G52790 Arabidopsis lyrata HOM05D006576 ORTHO05D008644 1.8e-272 942.6 558 77.4
FAN15G1632 Fragaria x ananassa HOM05D006576 ORTHO05D008644 1.5e-263 912.9 715 64.2
Zm00001eb107720 Zea mays HOM05D006576 ORTHO05D008644 4.2e-261 904.8 576 71.7
CDE04G1970 Ceratophyllum demersum HOM05D006576 ORTHO05D008644 9.4e-261 903.7 575 73.2
Sc02g0006340 Simmondsia chinensis HOM05D006576 ORTHO05D008644 1.1e-253 880.2 627 66.8
Mapoly0015s0075 Marchantia polymorpha HOM05D006576 ORTHO05D008644 4.4e-242 841.6 722 55.7
Pp3c21_15170 Physcomitrium patens HOM05D006576 ORTHO05D008644 3.7e-233 812.0 724 54.6
SMO367G0262 Selaginella moellendorffii HOM05D006576 ORTHO05D008644 3.8e-230 802.0 723 54.6
Hma1.2p1_0203F.1_g086550 Hydrangea macrophylla HOM05D006576 ORTHO05D008644 6.6e-214 748.0 597 63.7
CARHR036240 Cardamine hirsuta HOM05D006576 ORTHO05D008644 1.5e-189 667.2 364 81.0
Dinv36060 Davidia involucrata HOM05D006576 ORTHO05D008644 2.5e-181 639.8 445 72.4
unitig_578.g16727 Utricularia gibba HOM05D006576 ORTHO05D008644 6.2e-164 582.0 627 49.9
Oeu005363.1 Olea europaea HOM05D006576 ORTHO05D008644 4.5e-162 575.9 451 65.2
AUR62041679 Chenopodium quinoa HOM05D006576 ORTHO05D008644 1.6e-151 540.8 456 59.2
CBR_g55233 Chara braunii HOM05D006576 ORTHO05D008644 7.2e-144 515.4 536 50.4
AUR62041680 Chenopodium quinoa HOM05D006576 ORTHO05D008644 4.2e-120 436.4 241 80.1
CBR_g6514 Chara braunii HOM05D006576 ORTHO05D008644 1.5e-80 305.1 702 31.3
SEGI_38008 Sequoiadendron giganteum HOM05D006576 ORTHO05D008644 6.8e-78 296.2 152 84.2
SHI46795 Sapria himalayana HOM05D006576 ORTHO05D008644 1.4e-75 288.5 246 59.8
Lsat_1_v5_gn_3_960 Lactuca sativa HOM05D006576 ORTHO05D008644 3.1e-62 244.2 200 62.0
Nn2g14734 Nelumbo nucifera HOM05D006576 ORTHO05D008644 1.0e-28 132.9 90 72.2
Nn7g38200 Nelumbo nucifera HOM05D006576 ORTHO05D008644 1.7e-28 132.1 72 84.7
Atru.chr11.1906 Acer truncatum HOM05D006576 ORTHO05D008644 6.7e-25 120.2 77 67.5
MBI18_g06878_MAGBIO Magnolia biondii HOM05D006576 ORTHO05D008644 3.3e-24 117.9 70 71.4
MBI18_g09633_MAGBIO Magnolia biondii HOM05D006576 ORTHO05D008644 2.2e-23 115.2 71 69.0
MBI13_g29621_MAGBIO Magnolia biondii HOM05D006576 ORTHO05D008644 2.2e-20 105.1 70 65.7
MD05G1053300 Malus domestica HOM05D006576 ORTHO05D248938 1.9e-19 102.1 64 70.3
Zm00001eb171910 Zea mays HOM05D000538 ORTHO05D003297 1.1e-16 92.8 99 50.5
MBI18_g23781_MAGBIO Magnolia biondii HOM05D006576 ORTHO05D008644 1.2e-13 82.8 52 65.4
AL4G26800 Arabidopsis lyrata HOM05D006576 ORTHO05D008644 4.5e-13 80.9 99 48.5
Zm00001eb326440 Zea mays HOM05D006576 ORTHO05D028753 1.9e-11 75.5 48 72.9
Zm00001eb361570 Zea mays HOM05D006576 ORTHO05D028753 1.9e-11 75.5 48 72.9
Zm00001eb377960 Zea mays HOM05D006576 ORTHO05D028753 1.9e-11 75.5 48 72.9
Zm00001eb352490 Zea mays HOM05D006576 ORTHO05D008499 4.2e-11 74.3 63 58.7
Zm00001eb147180 Zea mays HOM05D014217 ORTHO05D000496 1.0e-09 69.7 67 50.7
CBR_g55378 Chara braunii HOM05D006576 ORTHO05D028753 6.8e-09 67.0 62 51.6
Zm00001eb413530 Zea mays HOM05D014217 ORTHO05D000496 1.2e-08 66.2 64 50.0


User provided reference genes

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