Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022359 Camellia sinensis var. sinensis HOM05D007340 ORTHO05D008979 1.5e-50 204.1 303 100.0
CSS0037045 Camellia sinensis var. sinensis HOM05D007340 ORTHO05D008979 7.6e-47 191.8 303 97.7
CSS0014652 Camellia sinensis var. sinensis HOM05D007340 ORTHO05D008979 9.3e-29 131.7 70 91.4
CSS0042730 Camellia sinensis var. sinensis HOM05D007340 ORTHO05D008979 9.3e-29 131.7 70 91.4
CSS0002707 Camellia sinensis var. sinensis HOM05D007340 ORTHO05D008979 2.1e-28 130.6 67 94.0
CSS0023925 Camellia sinensis var. sinensis HOM05D007340 ORTHO05D008979 1.6e-20 104.4 58 86.2
Rhsim04G0212000 Rhododendron simsii HOM05D001150 ORTHO05D000998 1.3e-17 94.7 71 64.8
TPR.G15743 Trifolium pratense HOM05D007340 ORTHO05D008979 1.8e-16 90.9 53 69.8
vmacro17996 Vaccinium macrocarpon HOM05D007340 ORTHO05D008979 7.7e-15 85.5 49 79.6
Thecc.04G270900 Theobroma cacao HOM05D007340 ORTHO05D008979 2.2e-14 84.0 60 60.0
BcaB01g04883 Brassica carinata HOM05D007340 ORTHO05D008979 2.9e-14 83.6 58 67.2
Psat2g009000 Pisum sativum HOM05D007340 ORTHO05D008979 3.2e-13 80.1 46 73.9
Psat7g256640 Pisum sativum HOM05D007340 ORTHO05D008979 4.2e-13 79.7 46 73.9
Ciclev10007051m.g Citrus clementina HOM05D007340 ORTHO05D008979 7.2e-13 79.0 60 60.0
Glyma.07G161500 Glycine max HOM05D007340 ORTHO05D008979 9.4e-13 78.6 45 73.3
QL06p005970 Quercus lobata HOM05D007340 ORTHO05D008979 1.2e-12 78.2 60 63.3
VMungo1215G3235 Vigna mungo HOM05D007340 ORTHO05D008979 1.6e-12 77.8 45 75.6
Ca_06378_v3 Cicer arietinum L. HOM05D007340 ORTHO05D008979 2.7e-12 77.0 45 73.3
Phvul.003G036500 Phaseolus vulgaris HOM05D007340 ORTHO05D008979 2.7e-12 77.0 45 75.6
TPR.G40710 Trifolium pratense HOM05D007340 ORTHO05D008979 2.7e-12 77.0 46 71.7
MD02G1277500 Malus domestica HOM05D007340 ORTHO05D008979 3.6e-12 76.6 60 56.7
arahy.Tifrunner.gnm1.ann1.PE1C4R Arachis hypogaea HOM05D007340 ORTHO05D008979 4.7e-12 76.3 50 64.0
CiPaw.01G157600 Carya illinoinensis HOM05D007340 ORTHO05D008979 1.4e-11 74.7 61 57.4
Prupe.1G570100 Prunus persica HOM05D007340 ORTHO05D008979 2.3e-11 73.9 46 69.6
Lj5g0026289 Lotus japonicus HOM05D007340 ORTHO05D008979 3.0e-11 73.6 47 68.1
DCAR_030586 Daucus carota HOM05D007340 ORTHO05D008979 5.1e-11 72.8 52 59.6
Prupe.3G113000 Prunus persica HOM05D007340 ORTHO05D008979 6.7e-11 72.4 58 53.4
Lalb_Chr15g0087231 Lupinus albus HOM05D007340 ORTHO05D008979 1.1e-10 71.6 45 71.1
RcHm_v2.0_Chr4g0419111 Rosa chinensis HOM05D007340 ORTHO05D008979 1.5e-10 71.2 60 53.3
TAR633G1855 Trochodendron aralioides HOM05D007340 ORTHO05D008979 2.6e-10 70.5 62 50.0
Duzib151G0496 Durio zibethinus HOM05D007340 ORTHO05D008979 3.3e-10 70.1 59 52.5
Ca_09841_v3 Cicer arietinum L. HOM05D007340 ORTHO05D008979 5.7e-10 69.3 41 73.2
TWI73G0639 Tripterygium wilfordii HOM05D007340 ORTHO05D008979 4.8e-09 66.2 60 48.3
Eucgr.C03952 Eucalyptus grandis HOM05D007340 ORTHO05D008979 8.2e-09 65.5 60 53.3
Eucgr.C04132 Eucalyptus grandis HOM05D007340 ORTHO05D008979 8.2e-09 65.5 60 53.3
Cc03_g02890 Coffea canephora HOM05D007340 ORTHO05D008979 1.8e-08 64.3 65 46.2
SalBow2G1987 Salvia bowleyana HOM05D007340 ORTHO05D008979 7.0e-08 62.4 48 60.4
EL10Ac8g18451 Beta vulgaris HOM05D007340 ORTHO05D008979 1.5e-07 61.2 59 49.2
Hma1.2p1_2025F.1_g311460 Hydrangea macrophylla HOM05D007340 ORTHO05D008979 3.4e-07 60.1 56 44.6
GSVIVG01017865001 Vitis vinifera HOM05D007340 ORTHO05D008979 3.4e-07 60.1 48 62.5
BcaB01g05282 Brassica carinata HOM05D007340 ORTHO05D021722 4.5e-07 59.7 37 67.6
Nn1g01889 Nelumbo nucifera HOM05D007340 ORTHO05D008979 7.7e-07 58.9 61 44.3
COL.COLO4_13983 Corchorus olitorius HOM05D007340 ORTHO05D008979 1.0e-06 58.5 64 42.2
Nitab4.5_0003070g0020 Nicotiana tabacum HOM05D007340 ORTHO05D008979 2.2e-06 57.4 52 48.1


User provided reference genes

Program Settings