Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022315 Camellia sinensis var. sinensis HOM05D008613 ORTHO05D006961 3.0e-41 171.4 86 100.0
CSS0023145 Camellia sinensis var. sinensis HOM05D008613 ORTHO05D006961 1.7e-39 165.6 86 97.7
Hma1.2p1_0415F.1_g148160 Hydrangea macrophylla HOM05D008837 ORTHO05D006961 1.2e-13 79.7 95 52.6
Gohir.A02G099100 Gossypium hirsutum HOM05D008613 ORTHO05D006961 4.5e-13 77.8 87 52.9
Gorai.003G077900 Gossypium raimondii HOM05D008613 ORTHO05D006961 4.5e-13 77.8 87 52.9
Gohir.D03G084800 Gossypium hirsutum HOM05D008613 ORTHO05D006961 5.9e-13 77.4 87 52.9
Manes.05G197800 Manihot esculenta HOM05D008837 ORTHO05D011237 7.7e-13 77.0 87 52.9
Sopen03g022050 Solanum pennellii HOM05D008837 ORTHO05D006961 1.0e-12 76.6 89 51.7
DCAR_020368 Daucus carota HOM05D008837 ORTHO05D006961 2.3e-12 75.5 89 49.4
Dinv29215 Davidia involucrata HOM05D008837 ORTHO05D006961 2.3e-12 75.5 101 50.5
Duzib205G1760 Durio zibethinus HOM05D008613 ORTHO05D006961 2.9e-12 75.1 83 50.6
Sabra15G0003300 Salix brachista HOM05D008837 ORTHO05D006961 6.6e-12 73.9 95 49.5
Rhsim03G0215000 Rhododendron simsii HOM05D000001 ORTHO05D000003 1.5e-11 72.8 100 47.0
Sabra16G0303600 Salix brachista HOM05D008613 ORTHO05D006961 3.3e-11 71.6 90 50.0
Sabra16G0303700 Salix brachista HOM05D008613 ORTHO05D006961 3.3e-11 71.6 90 50.0
Sabra16G0303800 Salix brachista HOM05D008613 ORTHO05D006961 3.3e-11 71.6 90 50.0
Solyc03g081330.1 Solanum lycopersicum HOM05D008837 ORTHO05D006961 4.2e-11 71.2 91 49.5
Thecc.03G217500 Theobroma cacao HOM05D008613 ORTHO05D006961 4.2e-11 71.2 83 45.8
Nn1g00438 Nelumbo nucifera HOM05D008613 ORTHO05D006961 9.5e-11 70.1 90 48.9
Oeu061026.1 Olea europaea HOM05D008837 ORTHO05D006961 9.5e-11 70.1 88 45.5
Nitab4.5_0000319g0150 Nicotiana tabacum HOM05D008837 ORTHO05D006961 1.2e-10 69.7 100 45.0
Potri.001G450000 Populus trichocarpa HOM05D008613 ORTHO05D006961 1.2e-10 69.7 89 48.3
Potri.015G004800 Populus trichocarpa HOM05D008837 ORTHO05D011237 1.2e-10 69.7 93 46.2
Sabra16G0303500 Salix brachista HOM05D008613 ORTHO05D006961 1.2e-10 69.7 90 48.9
Potri.001G449800 Populus trichocarpa HOM05D008613 ORTHO05D006961 1.6e-10 69.3 89 48.3
Potri.001G449900 Populus trichocarpa HOM05D008613 ORTHO05D006961 1.6e-10 69.3 89 48.3
PGR042G1156 Punica granatum HOM05D008837 ORTHO05D011237 1.6e-10 69.3 97 47.4
Gohir.A08G109100 Gossypium hirsutum HOM05D008613 ORTHO05D006961 2.8e-10 68.6 83 50.6
Actinidia18679 Actinidia chinensis HOM05D008837 ORTHO05D006961 3.6e-10 68.2 98 46.9
Gorai.004G128500 Gossypium raimondii HOM05D008613 ORTHO05D006961 3.6e-10 68.2 87 49.4
Sabra16G0303900 Salix brachista HOM05D008613 ORTHO05D006961 4.7e-10 67.8 89 47.2
DCAR_008982 Daucus carota HOM05D008837 ORTHO05D006961 6.1e-10 67.4 94 47.9
Potri.012G021602 Populus trichocarpa HOM05D008837 ORTHO05D006961 6.1e-10 67.4 93 44.1
vmacro11487 Vaccinium macrocarpon HOM05D008613 ORTHO05D006961 6.1e-10 67.4 97 41.2
Atru.chr9.1866 Acer truncatum HOM05D008613 ORTHO05D006961 8.0e-10 67.0 83 44.6
QL02p027286 Quercus lobata HOM05D008613 ORTHO05D006961 8.0e-10 67.0 97 41.2
Gohir.D08G121900 Gossypium hirsutum HOM05D008613 ORTHO05D006961 1.0e-09 66.6 87 49.4
PGSC0003DMG400043889 Solanum tuberosum HOM05D008837 ORTHO05D006961 1.0e-09 66.6 104 46.2
Thecc.03G208100 Theobroma cacao HOM05D018669 ORTHO05D011237 1.0e-09 66.6 91 49.5
Actinidia08695 Actinidia chinensis HOM05D008837 ORTHO05D006961 1.4e-09 66.2 97 47.4
Ciclev10023060m.g Citrus clementina HOM05D008837 ORTHO05D006961 1.4e-09 66.2 92 42.4
Manes.01G055100 Manihot esculenta HOM05D008613 ORTHO05D006961 1.4e-09 66.2 83 48.2
DCAR_020369 Daucus carota HOM05D008837 ORTHO05D011237 1.8e-09 65.9 86 45.3
COL.COLO4_10830 Corchorus olitorius HOM05D008613 ORTHO05D006961 2.3e-09 65.5 95 46.3
Dinv06444 Davidia involucrata HOM05D002018 ORTHO05D002179 3.0e-09 65.1 88 46.6
Oeu023688.1 Olea europaea HOM05D008613 ORTHO05D006961 3.0e-09 65.1 92 44.6
PGSC0003DMG400003216 Solanum tuberosum HOM05D008837 ORTHO05D006961 4.0e-09 64.7 99 44.4
Cpa.g.sc37.99 Carica papaya HOM05D008613 ORTHO05D006961 6.8e-09 63.9 89 46.1
Atru.chr12.2412 Acer truncatum HOM05D008837 ORTHO05D011237 8.9e-09 63.5 93 46.2
Solyc03g082350.2 Solanum lycopersicum HOM05D008837 ORTHO05D006961 8.9e-09 63.5 99 43.4
Ah.07g204750 Amaranthus hybridus HOM05D011561 ORTHO05D011237 1.2e-08 63.2 88 46.6
Manes.01G055000 Manihot esculenta HOM05D008613 ORTHO05D006961 1.5e-08 62.8 86 46.5
Eucgr.A01407 Eucalyptus grandis HOM05D008837 ORTHO05D011237 2.0e-08 62.4 86 45.3
Eucgr.A01409 Eucalyptus grandis HOM05D008837 ORTHO05D011237 2.6e-08 62.0 86 45.3
Prupe.5G133100 Prunus persica HOM05D008613 ORTHO05D006961 2.6e-08 62.0 86 41.9
Sopen03g022070 Solanum pennellii HOM05D008837 ORTHO05D006961 3.4e-08 61.6 103 42.7
TAR629G3181 Trochodendron aralioides HOM05D008613 ORTHO05D006961 4.4e-08 61.2 88 44.3
AL1G47210 Arabidopsis lyrata HOM05D008703 ORTHO05D006961 5.7e-08 60.8 80 43.8
Nitab4.5_0005040g0030 Nicotiana tabacum HOM05D008837 ORTHO05D006961 5.7e-08 60.8 101 40.6
Oeu023687.1 Olea europaea HOM05D008613 ORTHO05D006961 5.7e-08 60.8 90 41.1
Gohir.A09G186700 Gossypium hirsutum HOM05D018669 ORTHO05D011237 7.5e-08 60.5 94 45.7
THA.LOC104815392 Tarenaya hassleriana HOM05D008703 ORTHO05D006961 7.5e-08 60.5 80 41.2
Cpa.g.sc3.157 Carica papaya HOM05D008837 ORTHO05D011237 1.3e-07 59.7 88 37.5
CiPaw.11G110000 Carya illinoinensis HOM05D008613 ORTHO05D006961 1.3e-07 59.7 86 43.0
Ciclev10017302m.g Citrus clementina HOM05D008837 ORTHO05D011237 1.3e-07 59.7 94 39.4
PGSC0003DMG400003217 Solanum tuberosum HOM05D008837 ORTHO05D006961 1.3e-07 59.7 95 43.2
Nn3g18877 Nelumbo nucifera HOM05D031625 ORTHO05D006961 1.7e-07 59.3 89 41.6
Nn3g18879 Nelumbo nucifera HOM05D031625 ORTHO05D006961 1.7e-07 59.3 89 41.6
vmacro06438 Vaccinium macrocarpon HOM05D000001 ORTHO05D000003 1.7e-07 59.3 100 45.0
AT1G32928 Arabidopsis thaliana HOM05D008703 ORTHO05D006961 2.2e-07 58.9 83 43.4
Carub.0001s3124 Capsella rubella HOM05D008703 ORTHO05D006961 2.2e-07 58.9 80 41.2
Cc00_g29530 Coffea canephora HOM05D008837 ORTHO05D011237 2.8e-07 58.5 118 40.7
EL10Ac3g05185 Beta vulgaris HOM05D008837 ORTHO05D006961 3.7e-07 58.2 94 46.8
DCAR_008981 Daucus carota HOM05D008837 ORTHO05D011237 3.7e-07 58.2 91 40.7
TWI15G0337 Tripterygium wilfordii HOM05D008613 ORTHO05D006961 3.7e-07 58.2 98 37.8
Sp1g28080 Schrenkiella parvula HOM05D008703 ORTHO05D006961 4.9e-07 57.8 80 38.8
EL10Ac3g05184 Beta vulgaris HOM05D008613 ORTHO05D006961 8.3e-07 57.0 97 44.3
COL.COLO4_14365 Corchorus olitorius HOM05D018669 ORTHO05D011237 8.3e-07 57.0 87 46.0
Haze_09201 Corylus avellana HOM05D019613 ORTHO05D006961 8.3e-07 57.0 83 43.4
Nitab4.5_0000319g0160 Nicotiana tabacum HOM05D008837 ORTHO05D006961 8.3e-07 57.0 98 40.8
Aa31LG6G7520 Aethionema arabicum HOM05D008703 ORTHO05D006961 1.1e-06 56.6 87 39.1
Migut.E00723 Erythranthe guttata HOM05D008613 ORTHO05D006961 1.1e-06 56.6 83 39.8
Nn1g00439 Nelumbo nucifera HOM05D031625 ORTHO05D006961 1.1e-06 56.6 94 36.2
CARHR032250 Cardamine hirsuta HOM05D008703 ORTHO05D006961 1.8e-06 55.8 81 45.7
Gorai.006G203600 Gossypium raimondii HOM05D018669 ORTHO05D011237 2.4e-06 55.5 98 41.8
Thhalv10015156m.g Eutrema salsugineum HOM05D011561 ORTHO05D011237 3.1e-06 55.1 85 40.0
Nitab4.5_0014067g0010 Nicotiana tabacum HOM05D008837 ORTHO05D006961 5.4e-06 54.3 94 41.5
Cfa011897 Carpinus fangiana HOM05D019613 ORTHO05D006961 7.0e-06 53.9 83 38.6
FAN04G2016 Fragaria x ananassa HOM05D008613 ORTHO05D006961 7.0e-06 53.9 84 42.9
FAN08G0050 Fragaria x ananassa HOM05D008613 ORTHO05D006961 7.0e-06 53.9 84 42.9
Rhsim02G0253700 Rhododendron simsii HOM05D008613 ORTHO05D006961 7.0e-06 53.9 83 39.8
Carub.0008s1447 Capsella rubella HOM05D011561 ORTHO05D011237 9.2e-06 53.5 81 39.5
CARHR256120 Cardamine hirsuta HOM05D008703 ORTHO05D006961 9.2e-06 53.5 80 37.5
FvH4_5g10560 Fragaria vesca HOM05D008613 ORTHO05D006961 9.2e-06 53.5 84 40.5
FAN18G1327 Fragaria x ananassa HOM05D008613 ORTHO05D006961 9.2e-06 53.5 84 40.5


User provided reference genes

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