Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022263 Camellia sinensis var. sinensis HOM05D014961 ORTHO05D010667 3.0e-148 528.5 262 100.0
CSS0040293 Camellia sinensis var. sinensis HOM05D014961 ORTHO05D010667 1.1e-134 483.4 257 92.2
CSS0038751 Camellia sinensis var. sinensis HOM05D014961 ORTHO05D010667 6.5e-95 351.3 257 72.0
CSS0037342 Camellia sinensis var. sinensis HOM05D014961 ORTHO05D010667 1.3e-82 310.5 260 66.5
Actinidia30913 Actinidia chinensis HOM05D014961 ORTHO05D010667 9.8e-35 151.4 307 37.5
Dinv03360 Davidia involucrata HOM05D002010 ORTHO05D001602 3.1e-28 129.8 289 38.1
Dinv17748 Davidia involucrata HOM05D014961 ORTHO05D010667 2.0e-27 127.1 270 38.1
Actinidia05752 Actinidia chinensis HOM05D014961 ORTHO05D010667 3.4e-27 126.3 360 31.7
Hma1.2p1_0083F.1_g042640 Hydrangea macrophylla HOM05D014961 ORTHO05D010667 1.1e-22 111.3 293 35.8
Potri.013G032900 Populus trichocarpa HOM05D009433 ORTHO05D010667 2.8e-21 106.7 282 31.6
Atru.chr2.648 Acer truncatum HOM05D009433 ORTHO05D010667 2.0e-19 100.5 316 31.6
CiPaw.07G009700 Carya illinoinensis HOM05D009433 ORTHO05D010667 3.5e-16 89.7 287 30.7
Sabra13G0032700 Salix brachista HOM05D009433 ORTHO05D010667 7.8e-16 88.6 289 30.4
Rhsim10G0110300 Rhododendron simsii HOM05D000105 ORTHO05D010667 1.7e-15 87.4 103 44.7
GSVIVG01021903001 Vitis vinifera HOM05D009433 ORTHO05D010667 1.7e-15 87.4 299 30.1
Manes.08G126300 Manihot esculenta HOM05D009433 ORTHO05D010667 6.6e-15 85.5 298 28.9
TAR362G0181 Trochodendron aralioides HOM05D009433 ORTHO05D010667 8.7e-15 85.1 281 32.4
Thecc.05G291900 Theobroma cacao HOM05D009433 ORTHO05D010667 1.3e-13 81.3 344 29.7
Rhsim10G0109900 Rhododendron simsii HOM05D014961 ORTHO05D010667 4.8e-13 79.3 126 38.9
Ciclev10001604m.g Citrus clementina HOM05D009433 ORTHO05D010667 9.0e-12 75.1 359 27.3
Potri.005G047000 Populus trichocarpa HOM05D009433 ORTHO05D010667 3.4e-11 73.2 161 31.1
CiPaw.07G009500 Carya illinoinensis HOM05D009433 ORTHO05D010667 2.2e-10 70.5 295 25.4
Cc02_g31110 Coffea canephora HOM05D014961 ORTHO05D010667 3.8e-10 69.7 210 30.0
Cpa.g.sc117.35 Carica papaya HOM05D009433 ORTHO05D010667 1.1e-09 68.2 318 25.8
Prupe.6G336600 Prunus persica HOM05D014796 ORTHO05D010667 1.1e-09 68.2 281 24.9
Aqoxy5G00608 Aquilegia oxysepala HOM05D009433 ORTHO05D010667 1.2e-08 64.7 315 28.9
CiPaw.08G177600 Carya illinoinensis HOM05D009433 ORTHO05D010667 1.6e-08 64.3 271 25.5
FAN05G2376 Fragaria x ananassa HOM05D014796 ORTHO05D010667 2.7e-08 63.5 248 27.4
Prupe.6G336700 Prunus persica HOM05D014796 ORTHO05D010667 7.8e-08 62.0 191 31.9
Sabra05G0042800 Salix brachista HOM05D009433 ORTHO05D010667 3.0e-07 60.1 173 30.1
FAN14G0553 Fragaria x ananassa HOM05D014796 ORTHO05D010667 3.9e-07 59.7 251 27.5
QL03p000754 Quercus lobata HOM05D009433 ORTHO05D010667 1.1e-06 58.2 101 39.6
FAN02G2459 Fragaria x ananassa HOM05D014796 ORTHO05D010667 1.5e-06 57.8 251 27.1
FAN05G2611 Fragaria x ananassa HOM05D014796 ORTHO05D010667 1.5e-06 57.8 237 26.6
Cfa006491 Carpinus fangiana HOM05D009433 ORTHO05D010667 2.5e-06 57.0 179 32.4
FAN09G0699 Fragaria x ananassa HOM05D014796 ORTHO05D010667 4.3e-06 56.2 248 26.2


User provided reference genes

Program Settings