Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022262 Camellia sinensis var. sinensis HOM05D054593 ORTHO05D112085 9.5e-33 142.9 71 100.0
CSS0007029 Camellia sinensis var. sinensis HOM05D054593 ORTHO05D110893 6.2e-24 113.6 71 78.9
CSS0041378 Camellia sinensis var. sinensis HOM05D000212 ORTHO05D000225 1.8e-15 85.5 54 77.8
CSS0034385 Camellia sinensis var. sinensis HOM05D000212 ORTHO05D000225 2.3e-15 85.1 54 77.8
Dinv31222 Davidia involucrata HOM05D000212 ORTHO05D000225 2.4e-07 58.5 55 58.2
Lj2C19T1 Lonicera japonica HOM05D000212 ORTHO05D000225 3.1e-07 58.2 54 51.9
Dinv27597 Davidia involucrata HOM05D000212 ORTHO05D000006 4.0e-07 57.8 55 52.7
Dinv31221 Davidia involucrata HOM05D000212 ORTHO05D000225 6.8e-07 57.0 54 55.6
Dinv33920 Davidia involucrata HOM05D000212 ORTHO05D000225 1.5e-06 55.8 54 55.6
HanXRQChr16g0515861 Helianthus annuus HOM05D000212 ORTHO05D000225 1.5e-06 55.8 54 53.7
Dinv31220 Davidia involucrata HOM05D000212 ORTHO05D000225 2.0e-06 55.5 55 52.7
Medtr1g099870 Medicago truncatula HOM05D000212 ORTHO05D000225 3.4e-06 54.7 59 52.5
Hma1.2p1_0136F.1_g061970 Hydrangea macrophylla HOM05D000212 ORTHO05D000225 4.4e-06 54.3 58 51.7
Aa31LG10G4710 Aethionema arabicum HOM05D000212 ORTHO05D000225 9.9e-06 53.1 53 50.9
Hma1.2p1_0136F.1_g061990 Hydrangea macrophylla HOM05D000212 ORTHO05D000225 9.9e-06 53.1 54 53.7


User provided reference genes

Program Settings