Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022256 Camellia sinensis var. sinensis HOM05D003910 ORTHO05D004622 5.4e-259 897.1 448 100.0
Haze_17499 Corylus avellana HOM05D003910 ORTHO05D004622 2.4e-214 748.8 446 85.2
Cfa018581 Carpinus fangiana HOM05D003910 ORTHO05D004622 3.4e-213 745.0 446 84.8
Dinv07208 Davidia involucrata HOM05D003910 ORTHO05D004622 9.4e-211 736.9 448 84.8
Rhsim05G0148200 Rhododendron simsii HOM05D003910 ORTHO05D004622 1.5e-208 729.6 446 82.3
CiPaw.16G066200 Carya illinoinensis HOM05D003910 ORTHO05D004622 7.0e-206 720.7 446 82.3
Sabra05G0135000 Salix brachista HOM05D003910 ORTHO05D004622 1.1e-200 703.4 449 80.4
CANSAT25G1111 Cannabis sativa HOM05D003910 ORTHO05D004622 2.0e-200 702.6 447 79.9
Solyc08g069030.4 Solanum lycopersicum HOM05D003910 ORTHO05D004622 2.0e-200 702.6 451 80.0
PGSC0003DMG400029545 Solanum tuberosum HOM05D003910 ORTHO05D004622 3.3e-200 701.8 451 79.8
Cpa.g.sc64.96 Carica papaya HOM05D003910 ORTHO05D004622 1.7e-199 699.5 446 79.6
THA.LOC104813147 Tarenaya hassleriana HOM05D003910 ORTHO05D004622 6.3e-199 697.6 446 79.8
HanXRQChr17g0559761 Helianthus annuus HOM05D003910 ORTHO05D004622 1.4e-198 696.4 446 78.3
AL2G28910 Arabidopsis lyrata HOM05D003910 ORTHO05D004622 1.8e-198 696.0 442 79.0
MSTRG.25378 Avicennia marina HOM05D003910 ORTHO05D004622 4.1e-198 694.9 448 79.7
PGR044G2730 Punica granatum HOM05D003910 ORTHO05D004622 7.0e-198 694.1 446 78.9
CAN.G908.4 Capsicum annuum HOM05D003910 ORTHO05D004622 3.5e-197 691.8 451 78.5
Sp5g24850 Schrenkiella parvula HOM05D003910 ORTHO05D004622 3.5e-197 691.8 446 78.7
Lsat_1_v5_gn_8_141520 Lactuca sativa HOM05D003910 ORTHO05D004622 7.7e-197 690.6 444 78.6
AT1G69740 Arabidopsis thaliana HOM05D003910 ORTHO05D004622 1.0e-196 690.3 442 78.3
Dinv27301 Davidia involucrata HOM05D003910 ORTHO05D004622 1.0e-196 690.3 398 87.2
Sopen08g022680 Solanum pennellii HOM05D003910 ORTHO05D004622 1.3e-196 689.9 451 78.9
SGA_v2.0_scaffold52G18960 Striga asiatica HOM05D003910 ORTHO05D004622 2.2e-196 689.1 456 78.5
Thecc.08G127500 Theobroma cacao HOM05D003910 ORTHO05D004622 2.2e-196 689.1 446 79.1
Gohir.D05G237801 Gossypium hirsutum HOM05D003910 ORTHO05D004622 2.5e-195 685.6 446 78.7
Gorai.009G246200 Gossypium raimondii HOM05D003910 ORTHO05D004622 2.5e-195 685.6 446 78.7
QL09p034136 Quercus lobata HOM05D003910 ORTHO05D004622 7.2e-195 684.1 446 78.9
Nn4g23592 Nelumbo nucifera HOM05D003910 ORTHO05D004622 1.6e-194 682.9 436 81.0
COL.COLO4_24698 Corchorus olitorius HOM05D003910 ORTHO05D004622 2.1e-194 682.6 446 77.8
CARHR062800 Cardamine hirsuta HOM05D003910 ORTHO05D004622 4.7e-194 681.4 442 77.8
Gohir.A05G235500 Gossypium hirsutum HOM05D003910 ORTHO05D004622 1.0e-193 680.2 446 78.0
Carub.0002s1641 Capsella rubella HOM05D003910 ORTHO05D004622 1.8e-193 679.5 442 77.6
Thhalv10018595m.g Eutrema salsugineum HOM05D003910 ORTHO05D004622 4.0e-193 678.3 446 77.1
Nitab4.5_0005516g0010 Nicotiana tabacum HOM05D003910 ORTHO05D004622 4.0e-193 678.3 451 78.3
Nitab4.5_0000502g0120 Nicotiana tabacum HOM05D003910 ORTHO05D004622 8.8e-193 677.2 447 79.0
BolC6t39425H Brassica oleracea HOM05D003910 ORTHO05D004622 2.0e-192 676.0 446 77.8
C06p43500 Brassica napus HOM05D003910 ORTHO05D004622 2.6e-192 675.6 446 77.8
Manes.18G078475 Manihot esculenta HOM05D003910 ORTHO05D004622 2.6e-192 675.6 446 78.5
BcaB03g14749 Brassica carinata HOM05D003910 ORTHO05D004622 3.3e-192 675.2 446 78.0
MELO3C008086.2 Cucumis melo HOM05D003910 ORTHO05D004622 5.7e-192 674.5 446 78.0
BcaC08g46419 Brassica carinata HOM05D003910 ORTHO05D004622 7.5e-192 674.1 446 77.6
Duzib041G0414 Durio zibethinus HOM05D003910 ORTHO05D004622 1.7e-191 672.9 446 77.4
Potri.002G082300 Populus trichocarpa HOM05D003910 ORTHO05D004622 2.2e-191 672.5 448 78.3
Manes.02G164600 Manihot esculenta HOM05D003910 ORTHO05D004622 3.7e-191 671.8 435 79.5
Atru.chr13.1495 Acer truncatum HOM05D003910 ORTHO05D004622 1.1e-190 670.2 468 74.8
TAR629G0788 Trochodendron aralioides HOM05D003910 ORTHO05D004622 1.4e-190 669.8 449 77.5
GSVIVG01008851001 Vitis vinifera HOM05D003910 ORTHO05D004622 1.8e-190 669.5 446 77.6
Aa31LG11G8660 Aethionema arabicum HOM05D003910 ORTHO05D004622 2.4e-190 669.1 446 76.7
Ciclev10001195m.g Citrus clementina HOM05D003910 ORTHO05D004622 4.1e-190 668.3 446 77.4
MD15G1346700 Malus domestica HOM05D003910 ORTHO05D004622 4.1e-190 668.3 446 78.0
A07p36130 Brassica napus HOM05D003910 ORTHO05D004622 7.0e-190 667.5 448 77.2
Prupe.1G494300 Prunus persica HOM05D003910 ORTHO05D004622 9.1e-190 667.2 446 78.7
MD08G1161600 Malus domestica HOM05D003910 ORTHO05D004622 1.2e-189 666.8 446 77.8
CsaV3_2G033150 Cucumis sativus L. HOM05D003910 ORTHO05D004622 1.6e-189 666.4 446 77.6
ClCG11G008960 Citrullus lanatus HOM05D003910 ORTHO05D004622 2.7e-189 665.6 446 77.4
Sabra02G0064500 Salix brachista HOM05D003910 ORTHO05D004622 1.0e-188 663.7 448 77.5
CDE10G0179 Ceratophyllum demersum HOM05D003910 ORTHO05D004622 1.7e-188 662.9 445 76.4
ECA233G1142 Erigeron canadensis HOM05D003910 ORTHO05D004622 1.7e-188 662.9 446 76.7
Lj7A342T56 Lonicera japonica HOM05D003910 ORTHO05D004622 5.0e-188 661.4 386 85.8
BraA07t31189Z Brassica rapa HOM05D003910 ORTHO05D004622 8.5e-188 660.6 446 76.7
SalBow7G1186 Salvia bowleyana HOM05D003910 ORTHO05D004622 8.5e-188 660.6 474 73.6
Cc08_g06800 Coffea canephora HOM05D003910 ORTHO05D004622 1.6e-186 656.4 453 75.9
PSO384G4520 Papaver somniferum HOM05D003910 ORTHO05D004622 3.6e-186 655.2 449 75.1
Oeu028562.1 Olea europaea HOM05D003910 ORTHO05D004622 6.1e-186 654.4 430 79.1
Sed0003239 Sechium edule HOM05D003910 ORTHO05D004622 8.0e-186 654.1 446 75.1
TWI60G1334 Tripterygium wilfordii HOM05D003910 ORTHO05D004622 8.0e-186 654.1 449 76.8
PSO339G3693 Papaver somniferum HOM05D003910 ORTHO05D004622 1.4e-185 653.3 449 74.8
TWI32G0928 Tripterygium wilfordii HOM05D003910 ORTHO05D004622 4.0e-185 651.7 456 74.6
Ah.15g093760 Amaranthus hybridus HOM05D003910 ORTHO05D004622 1.2e-184 650.2 479 72.0
Eucgr.F03796 Eucalyptus grandis HOM05D003910 ORTHO05D004622 1.2e-184 650.2 447 76.3
AUR62014326 Chenopodium quinoa HOM05D003910 ORTHO05D004622 2.6e-184 649.0 453 75.1
AUR62019066 Chenopodium quinoa HOM05D003910 ORTHO05D004622 2.2e-183 646.0 453 74.8
Duzib116G0657 Durio zibethinus HOM05D003910 ORTHO05D004622 2.2e-183 646.0 445 76.2
Migut.C01121 Erythranthe guttata HOM05D003910 ORTHO05D004622 2.2e-183 646.0 448 76.1
EL10Ac1g01030 Beta vulgaris HOM05D003910 ORTHO05D004622 1.8e-182 642.9 468 73.5
DCAR_016682 Daucus carota HOM05D003910 ORTHO05D004622 5.0e-180 634.8 403 80.1
Medtr3g088610 Medicago truncatula HOM05D003910 ORTHO05D004622 1.2e-178 630.2 416 77.6
FAN15G2864 Fragaria x ananassa HOM05D003910 ORTHO05D004622 1.6e-178 629.8 436 75.9
Phvul.009G127100 Phaseolus vulgaris HOM05D003910 ORTHO05D004622 1.6e-178 629.8 429 75.5
Lalb_Chr11g0066041 Lupinus albus HOM05D003910 ORTHO05D004622 2.8e-178 629.0 448 73.2
VMungo1309G0189 Vigna mungo HOM05D003910 ORTHO05D004622 8.9e-177 624.0 446 73.3
Lj1g0017187 Lotus japonicus HOM05D003910 ORTHO05D004622 1.5e-176 623.2 447 73.4
Glyma.04G247700 Glycine max HOM05D003910 ORTHO05D004622 5.7e-176 621.3 447 74.0
Lalb_Chr08g0241321 Lupinus albus HOM05D003910 ORTHO05D004622 1.3e-175 620.2 449 74.2
FvH4_2g27170 Fragaria vesca HOM05D003910 ORTHO05D004622 6.3e-175 617.8 436 75.2
FAN24G0257 Fragaria x ananassa HOM05D003910 ORTHO05D004622 6.3e-175 617.8 436 75.2
FAN20G2211 Fragaria x ananassa HOM05D003910 ORTHO05D004622 1.4e-174 616.7 436 75.5
FAN27G3176 Fragaria x ananassa HOM05D003910 ORTHO05D004622 1.8e-174 616.3 436 75.0
RcHm_v2.0_Chr6g0296081 Rosa chinensis HOM05D003910 ORTHO05D004622 5.4e-174 614.8 436 75.5
Peaxi162Scf00288g00822 Petunia axillaris HOM05D003910 ORTHO05D004622 1.0e-172 610.5 451 73.2
Ca_16573_v3 Cicer arietinum L. HOM05D003910 ORTHO05D004622 2.9e-172 609.0 430 74.7
Ca_29570_v3 Cicer arietinum L. HOM05D003910 ORTHO05D004622 2.9e-172 609.0 430 74.7
unitig_46.g18101 Utricularia gibba HOM05D003910 ORTHO05D004622 5.0e-172 608.2 358 83.8
Aqoxy3G03785 Aquilegia oxysepala HOM05D003910 ORTHO05D004622 4.3e-171 605.1 442 71.0
Psat5g087720 Pisum sativum HOM05D003910 ORTHO05D004622 1.2e-170 603.6 343 86.6
Hma1.2p1_0129F.1_g060300 Hydrangea macrophylla HOM05D003910 ORTHO05D004622 3.6e-170 602.1 416 75.2
ATR0691G248 Amborella trichopoda HOM05D003910 ORTHO05D004622 6.1e-170 601.3 446 69.5
TPR.G16047 Trifolium pratense HOM05D003910 ORTHO05D004622 6.1e-170 601.3 431 73.3
Os06g0704600 Oryza sativa ssp. japonica HOM05D003910 ORTHO05D004622 1.8e-169 599.7 448 70.8
Zm00001eb227310 Zea mays HOM05D003910 ORTHO05D004622 4.4e-168 595.1 407 75.4
HPP92_019462 Vanilla planifolia HOM05D003910 ORTHO05D004622 1.4e-166 590.1 437 71.6
AagrBONN_evm.TU.Sc2ySwM_117.3949 Anthoceros agrestis HOM05D003910 ORTHO05D004622 2.4e-166 589.3 435 70.6
arahy.Tifrunner.gnm1.ann1.LMC2LS Arachis hypogaea HOM05D003910 ORTHO05D004622 2.3e-164 582.8 454 68.7
arahy.Tifrunner.gnm1.ann1.YMC104 Arachis hypogaea HOM05D003910 ORTHO05D004622 2.3e-164 582.8 454 68.7
SMO147G0120 Selaginella moellendorffii HOM05D003910 ORTHO05D004622 3.0e-164 582.4 379 76.3
SHI34070 Sapria himalayana HOM05D003910 ORTHO05D004622 6.2e-162 574.7 466 65.0
Aqoxy6G02874 Aquilegia oxysepala HOM05D003910 ORTHO05D004622 8.9e-161 570.9 445 66.7
Mapoly0065s0095 Marchantia polymorpha HOM05D003910 ORTHO05D004622 5.8e-160 568.2 377 75.3
Pp3c4_13690 Physcomitrium patens HOM05D003910 ORTHO05D004622 6.4e-159 564.7 377 73.7
MBI14_g37526_MAGBIO Magnolia biondii HOM05D003910 ORTHO05D004622 1.9e-158 563.1 446 66.8
MBI14_g21210_MAGBIO Magnolia biondii HOM05D003910 ORTHO05D004622 3.2e-158 562.4 329 84.5
Pp3c12_10600 Physcomitrium patens HOM05D003910 ORTHO05D004622 4.1e-158 562.0 377 73.7
Oeu059440.1 Olea europaea HOM05D003910 ORTHO05D004622 5.4e-158 561.6 399 74.2
CDE10G1335 Ceratophyllum demersum HOM05D003910 ORTHO05D004622 4.7e-154 548.5 383 73.6
Actinidia29473 Actinidia chinensis HOM05D003910 ORTHO05D004622 3.7e-151 538.9 385 76.9
SEGI_23261 Sequoiadendron giganteum HOM05D003910 ORTHO05D004622 4.4e-144 515.4 396 69.2
PSO063G2338 Papaver somniferum HOM05D003910 ORTHO05D004622 2.1e-141 506.5 297 84.8
Sc16g0000040 Simmondsia chinensis HOM05D003910 ORTHO05D004622 3.9e-140 502.3 370 72.7
CARHR035900 Cardamine hirsuta HOM05D003910 ORTHO05D004622 4.3e-139 498.8 451 60.3
Thhalv10012213m.g Eutrema salsugineum HOM05D003910 ORTHO05D004622 4.3e-139 498.8 455 58.7
CSS0027293 Camellia sinensis var. sinensis HOM05D003910 ORTHO05D004622 1.2e-136 490.7 369 73.4
AL1G52270 Arabidopsis lyrata HOM05D003910 ORTHO05D004622 4.4e-136 488.8 445 60.0
AT1G44318 Arabidopsis thaliana HOM05D003910 ORTHO05D004622 4.4e-136 488.8 446 59.9
BcaB07g33952 Brassica carinata HOM05D003910 ORTHO05D004622 2.1e-133 479.9 356 68.5
Carub.0001s3515 Capsella rubella HOM05D003910 ORTHO05D004622 2.7e-133 479.6 365 68.5
Sp1g33510 Schrenkiella parvula HOM05D003910 ORTHO05D004622 8.7e-132 474.6 456 57.2
BcaC08g42844 Brassica carinata HOM05D003910 ORTHO05D004622 1.1e-131 474.2 355 68.5
C06p00600 Brassica napus HOM05D003910 ORTHO05D004622 1.1e-131 474.2 355 68.5
BolC6t35193H Brassica oleracea HOM05D003910 ORTHO05D004622 1.1e-131 474.2 355 68.5
Glyma.06G115000 Glycine max HOM05D003910 ORTHO05D004622 5.6e-131 471.9 353 72.0
BraSC36t46049Z Brassica rapa HOM05D003910 ORTHO05D004622 7.3e-131 471.5 356 68.3
A10p07550 Brassica napus HOM05D003910 ORTHO05D004622 4.8e-130 468.8 356 67.7
TPR.G35178 Trifolium pratense HOM05D003910 ORTHO05D004622 2.5e-123 446.4 459 56.9
MCO01G126 Micromonas commoda HOM05D003910 ORTHO05D004622 6.9e-121 438.3 383 59.8
PSO782G2793 Papaver somniferum HOM05D003910 ORTHO05D004622 7.6e-120 434.9 333 67.0
Cre02.g091050 Chlamydomonas reinhardtii HOM05D003910 ORTHO05D004622 1.3e-114 417.5 362 57.5
SGA_v2.0_scaffold24G10456 Striga asiatica HOM05D003910 ORTHO05D004622 1.3e-114 417.5 341 67.2
PRCOL_00003407 Prasinoderma coloniale HOM05D003910 ORTHO05D004622 4.9e-111 405.6 329 63.2
Aa31LG6G9390 Aethionema arabicum HOM05D003910 ORTHO05D004622 1.2e-109 401.0 297 68.4
Atru.chr12.1381 Acer truncatum HOM05D003910 ORTHO05D004622 5.9e-104 382.1 241 80.9
Psat4g053280 Pisum sativum HOM05D003910 ORTHO05D004622 2.1e-85 320.5 251 66.5
Aa31sc95G130 Aethionema arabicum HOM05D003910 ORTHO05D004622 9.7e-75 285.0 251 61.4
Actinidia03462 Actinidia chinensis HOM05D003910 ORTHO05D004622 1.3e-74 284.6 210 71.4
Nn3g17592 Nelumbo nucifera HOM05D003910 ORTHO05D004622 1.0e-68 265.0 287 54.4
CBR_g49534 Chara braunii HOM05D003910 ORTHO05D000048 2.2e-66 257.3 201 62.7
arahy.Tifrunner.gnm1.ann1.875P1G Arachis hypogaea HOM05D003910 ORTHO05D004622 2.3e-63 247.3 182 68.7
arahy.Tifrunner.gnm1.ann1.YZW1CW Arachis hypogaea HOM05D003910 ORTHO05D004622 1.8e-60 237.7 182 66.5
Haze_27031 Corylus avellana HOM05D003910 ORTHO05D004622 2.2e-58 230.7 293 46.1
Psat0s476g0040 Pisum sativum HOM05D003910 ORTHO05D004622 4.7e-53 213.0 166 65.1
arahy.Tifrunner.gnm1.ann1.MAXD3F Arachis hypogaea HOM05D003910 ORTHO05D004622 8.0e-53 212.2 172 64.5
arahy.Tifrunner.gnm1.ann1.I497ZX Arachis hypogaea HOM05D003910 ORTHO05D004622 2.3e-52 210.7 172 62.8
Cfa022049 Carpinus fangiana HOM05D003910 ORTHO05D004622 1.1e-46 191.8 328 37.8
arahy.Tifrunner.gnm1.ann1.FDSF2K Arachis hypogaea HOM05D003910 ORTHO05D004622 5.6e-46 189.5 172 59.9
Aa31sc107G70 Aethionema arabicum HOM05D003910 ORTHO05D004622 8.0e-45 185.7 165 61.2
arahy.Tifrunner.gnm1.ann1.KLV74S Arachis hypogaea HOM05D003910 ORTHO05D004622 3.1e-44 183.7 172 58.7
Nn4g23594 Nelumbo nucifera HOM05D003910 ORTHO05D004622 7.5e-43 179.1 100 87.0
BcaB06g27098 Brassica carinata HOM05D003910 ORTHO05D004622 9.2e-41 172.2 118 71.2
Psat4g053240 Pisum sativum HOM05D003910 ORTHO05D004622 3.0e-39 167.2 121 71.1
BcaB05g22163 Brassica carinata HOM05D003910 ORTHO05D004622 8.6e-39 165.6 118 68.6
BcaB04g19319 Brassica carinata HOM05D003910 ORTHO05D004622 4.4e-35 153.3 117 65.8
TAR622G0657 Trochodendron aralioides HOM05D003910 ORTHO05D004622 1.7e-34 151.4 135 62.2
TPR.G20499 Trifolium pratense HOM05D003910 ORTHO05D004622 3.7e-34 150.2 122 65.6
Haze_27000 Corylus avellana HOM05D003910 ORTHO05D004622 1.9e-33 147.9 182 43.4
SpUn0247_0040 Schrenkiella parvula HOM05D003910 ORTHO05D004622 4.6e-32 143.3 76 84.2
Oeu059446.1 Olea europaea HOM05D003910 ORTHO05D004622 1.7e-31 141.4 94 73.4
Actinidia03463 Actinidia chinensis HOM05D003910 ORTHO05D004622 4.0e-28 130.2 72 90.3
arahy.Tifrunner.gnm1.ann1.ZWJ939 Arachis hypogaea HOM05D000074 ORTHO05D004622 1.1e-25 122.1 203 40.4
TAR371G0308 Trochodendron aralioides HOM05D003910 ORTHO05D004622 1.3e-23 115.2 74 77.0
Sp6g37550 Schrenkiella parvula HOM05D003910 ORTHO05D004622 2.1e-16 91.3 90 53.3
Psat1g078960 Pisum sativum HOM05D003910 ORTHO05D004622 2.3e-15 87.8 77 59.7
Psat1g079000 Pisum sativum HOM05D003910 ORTHO05D004622 2.3e-15 87.8 77 59.7
Aa31sc107G60 Aethionema arabicum HOM05D003910 ORTHO05D059684 2.5e-14 84.3 49 83.7
Lsat_1_v5_gn_8_139480 Lactuca sativa HOM05D003910 ORTHO05D004420 9.6e-14 82.4 52 76.9
SEGI_40510 Sequoiadendron giganteum HOM05D003910 ORTHO05D004622 5.8e-11 73.2 50 66.0
arahy.Tifrunner.gnm1.ann1.LHV34C Arachis hypogaea HOM05D003910 ORTHO05D004622 8.4e-10 69.3 50 72.0
ECA233G3734 Erigeron canadensis HOM05D005443 ORTHO05D009021 9.3e-09 65.9 104 43.3
Lsat_1_v5_gn_8_143861 Lactuca sativa HOM05D003910 ORTHO05D004622 1.2e-08 65.5 41 78.0
Nn3g17591 Nelumbo nucifera HOM05D003910 ORTHO05D004622 1.6e-08 65.1 36 86.1


User provided reference genes

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