Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022238 Camellia sinensis var. sinensis HOM05D003457 ORTHO05D009249 3.2e-184 648.3 332 100.0
CSS0029860 Camellia sinensis var. sinensis HOM05D003457 ORTHO05D009249 2.1e-183 645.6 332 99.7
Actinidia34268 Actinidia chinensis HOM05D003457 ORTHO05D009249 6.3e-95 351.7 333 63.4
Actinidia08697 Actinidia chinensis HOM05D003457 ORTHO05D009249 1.4e-94 350.5 334 62.6
Dinv35380 Davidia involucrata HOM05D003457 ORTHO05D009746 2.4e-94 349.7 368 57.9
Dinv29212 Davidia involucrata HOM05D003457 ORTHO05D009249 1.8e-89 333.6 359 56.3
Rhsim03G0215300 Rhododendron simsii HOM05D003457 ORTHO05D009249 4.1e-62 242.7 264 58.3
Gohir.D04G000050 Gossypium hirsutum HOM05D003457 ORTHO05D009249 2.0e-53 213.8 351 42.5
Gorai.012G000700 Gossypium raimondii HOM05D003457 ORTHO05D009249 3.3e-51 206.5 351 41.6
Manes.01G043100 Manihot esculenta HOM05D003457 ORTHO05D009249 7.3e-51 205.3 367 42.0
Thecc.03G208400 Theobroma cacao HOM05D003457 ORTHO05D009249 3.6e-50 203.0 360 42.2
Nn1g00443 Nelumbo nucifera HOM05D003457 ORTHO05D009249 5.8e-48 195.7 372 39.0
Nitab4.5_0000319g0070 Nicotiana tabacum HOM05D003457 ORTHO05D009249 5.8e-48 195.7 355 40.6
Duzib205G0475 Durio zibethinus HOM05D003457 ORTHO05D009249 1.1e-46 191.4 375 39.7
Gohir.D04G000080 Gossypium hirsutum HOM05D003457 ORTHO05D009249 5.4e-46 189.1 330 40.6
Duzib084G1096 Durio zibethinus HOM05D003457 ORTHO05D009249 9.2e-46 188.3 381 39.4
PGSC0003DMG400000588 Solanum tuberosum HOM05D003457 ORTHO05D009249 3.0e-44 183.3 360 39.4
Duzib068G0780 Durio zibethinus HOM05D003457 ORTHO05D009249 1.5e-43 181.0 327 40.7
Solyc03g081310.3 Solanum lycopersicum HOM05D003457 ORTHO05D009249 2.5e-43 180.3 352 37.8
Sopen03g022030 Solanum pennellii HOM05D003457 ORTHO05D009249 7.3e-43 178.7 350 38.0
TAR636G2436 Trochodendron aralioides HOM05D003457 ORTHO05D009249 1.8e-41 174.1 271 43.5
TWI23G0841 Tripterygium wilfordii HOM05D003457 ORTHO05D009249 3.1e-41 173.3 349 38.1
MBI12_g09299_MAGBIO Magnolia biondii HOM05D003457 ORTHO05D009249 1.5e-40 171.0 298 43.0
MSTRG.31 Avicennia marina HOM05D003457 ORTHO05D009249 9.9e-40 168.3 335 40.3
RcHm_v2.0_Chr1g0382841 Rosa chinensis HOM05D003457 ORTHO05D009249 1.7e-39 167.5 343 37.0
MD07G1298800 Malus domestica HOM05D003457 ORTHO05D009249 2.2e-39 167.2 372 38.2
Nitab4.5_0005040g0050 Nicotiana tabacum HOM05D003457 ORTHO05D009249 2.2e-39 167.2 424 35.4
Peaxi162Scf00300g00833 Petunia axillaris HOM05D003457 ORTHO05D009249 3.7e-39 166.4 318 42.8
Ciclev10020653m.g Citrus clementina HOM05D003457 ORTHO05D009249 6.4e-39 165.6 334 41.0
Migut.F00990 Erythranthe guttata HOM05D003457 ORTHO05D009249 1.2e-37 161.4 335 40.6
TAR629G1045 Trochodendron aralioides HOM05D003457 ORTHO05D009249 1.2e-37 161.4 334 41.3
Cc02_g00840 Coffea canephora HOM05D003457 ORTHO05D009249 4.6e-37 159.5 346 39.6
MD01G1228100 Malus domestica HOM05D003457 ORTHO05D009249 1.0e-36 158.3 377 36.3
FvH4_7g32890 Fragaria vesca HOM05D003457 ORTHO05D009249 3.0e-36 156.8 347 35.7
Prupe.2G318600 Prunus persica HOM05D003457 ORTHO05D009249 8.6e-36 155.2 410 34.1
CAN.G303.15 Capsicum annuum HOM05D003457 ORTHO05D009249 1.5e-35 154.5 335 35.2
Cpa.g.sc3.155 Carica papaya HOM05D003457 ORTHO05D009249 5.6e-35 152.5 293 38.9
SGA_v2.0_scaffold141G35555 Striga asiatica HOM05D003457 ORTHO05D009249 2.1e-34 150.6 330 39.1
SalBow2G2220 Salvia bowleyana HOM05D003457 ORTHO05D009249 2.8e-34 150.2 326 38.0
THA.LOC104798986 Tarenaya hassleriana HOM05D003457 ORTHO05D009249 3.6e-34 149.8 322 37.3
Aqoxy5G04336 Aquilegia oxysepala HOM05D003457 ORTHO05D009249 3.1e-33 146.7 333 37.2
Aa31LG11G3740 Aethionema arabicum HOM05D003457 ORTHO05D009249 5.2e-33 146.0 341 37.0
PGR142G1344 Punica granatum HOM05D003457 ORTHO05D009249 6.8e-33 145.6 332 37.3
CiPaw.06G041400 Carya illinoinensis HOM05D003457 ORTHO05D009249 1.5e-32 144.4 353 34.3
Oeu037975.2 Olea europaea HOM05D003457 ORTHO05D009249 5.8e-32 142.5 368 35.3
FAN01G1561 Fragaria x ananassa HOM05D003457 ORTHO05D009746 7.6e-32 142.1 335 34.9
Lsat_1_v5_gn_8_4361 Lactuca sativa HOM05D003457 ORTHO05D009249 1.7e-31 141.0 250 41.6
Lsat_1_v5_gn_9_3980 Lactuca sativa HOM05D003457 ORTHO05D009249 1.7e-31 141.0 253 42.3
EL10Ac3g05182 Beta vulgaris HOM05D003457 ORTHO05D009249 2.2e-31 140.6 340 35.9
Potri.015G005100 Populus trichocarpa HOM05D003457 ORTHO05D009249 2.2e-31 140.6 354 35.6
Sp2g22840 Schrenkiella parvula HOM05D003457 ORTHO05D009249 2.9e-31 140.2 342 35.7
FAN03G1743 Fragaria x ananassa HOM05D003457 ORTHO05D009746 3.8e-31 139.8 333 33.9
Lsat_1_v5_gn_5_51360 Lactuca sativa HOM05D003457 ORTHO05D009249 3.8e-31 139.8 253 41.9
Cfa016162 Carpinus fangiana HOM05D003457 ORTHO05D009249 6.4e-31 139.0 355 36.3
Lsat_1_v5_gn_1_120581 Lactuca sativa HOM05D003457 ORTHO05D009249 6.4e-31 139.0 250 40.4
Eucgr.K00429 Eucalyptus grandis HOM05D003457 ORTHO05D009249 1.1e-30 138.3 356 35.4
FAN10G0211 Fragaria x ananassa HOM05D003457 ORTHO05D009746 1.1e-30 138.3 334 32.9
CARHR188920 Cardamine hirsuta HOM05D003457 ORTHO05D009249 1.4e-30 137.9 246 38.6
Thhalv10005511m.g Eutrema salsugineum HOM05D003457 ORTHO05D009249 1.4e-30 137.9 338 35.2
MELO3C033815.2 Cucumis melo HOM05D003457 ORTHO05D009249 1.9e-30 137.5 293 34.8
AL6G36090 Arabidopsis lyrata HOM05D003457 ORTHO05D009249 9.2e-30 135.2 346 35.3
DCAR_020371 Daucus carota HOM05D003457 ORTHO05D009249 9.2e-30 135.2 236 42.4
Lsat_1_v5_gn_7_20360 Lactuca sativa HOM05D003457 ORTHO05D009249 9.2e-30 135.2 284 35.6
CsaV3_5G004840 Cucumis sativus L. HOM05D003457 ORTHO05D009249 4.6e-29 132.9 336 32.4
FAN10G3191 Fragaria x ananassa HOM05D003457 ORTHO05D009746 3.0e-28 130.2 334 31.4
AT5G24500 Arabidopsis thaliana HOM05D003457 ORTHO05D009249 1.6e-26 124.4 346 34.4
ClCG00G005020 Citrullus lanatus HOM05D003457 ORTHO05D009249 6.2e-26 122.5 296 33.1
ClCG01G004590 Citrullus lanatus HOM05D003457 ORTHO05D009249 6.2e-26 122.5 296 33.1
ClCG01G004630 Citrullus lanatus HOM05D003457 ORTHO05D009249 6.2e-26 122.5 296 33.1
HanXRQChr08g0225921 Helianthus annuus HOM05D003457 ORTHO05D009249 4.0e-25 119.8 278 36.3
Carub.0006s2232 Capsella rubella HOM05D003457 ORTHO05D009249 9.0e-25 118.6 353 35.1
Sabra15G0003600 Salix brachista HOM05D003457 ORTHO05D009249 1.5e-24 117.9 283 36.4
Ah.07g204690 Amaranthus hybridus HOM05D003457 ORTHO05D009249 2.6e-24 117.1 222 36.9
AUR62035619 Chenopodium quinoa HOM05D003457 ORTHO05D009249 4.4e-24 116.3 301 33.6
Sc13g0010260 Simmondsia chinensis HOM05D003457 ORTHO05D009249 5.8e-24 115.9 332 34.9
ATR1155G002 Amborella trichopoda HOM05D003457 ORTHO05D009249 3.2e-22 110.2 273 32.6
Lj1g0002342 Lotus japonicus HOM05D003457 ORTHO05D009249 4.2e-22 109.8 259 35.9
PSO782G2427 Papaver somniferum HOM05D003457 ORTHO05D009249 4.2e-22 109.8 247 36.8
Potri.012G021300 Populus trichocarpa HOM05D003457 ORTHO05D009249 3.5e-21 106.7 289 33.2
HPP92_015415 Vanilla planifolia HOM05D003457 ORTHO05D009249 3.5e-21 106.7 304 34.5
CiPaw.02G048700 Carya illinoinensis HOM05D003457 ORTHO05D009249 7.8e-21 105.5 214 36.0
AUR62006007 Chenopodium quinoa HOM05D003457 ORTHO05D009746 7.8e-21 105.5 327 31.8
Sabra12G0012300 Salix brachista HOM05D003457 ORTHO05D009249 1.0e-20 105.1 287 34.5
Ca_16777_v3 Cicer arietinum L. HOM05D003457 ORTHO05D009249 2.3e-20 104.0 216 34.3
COL.COLO4_14368 Corchorus olitorius HOM05D003457 ORTHO05D009249 2.3e-20 104.0 324 32.4
Glyma.04G228600 Glycine max HOM05D003457 ORTHO05D009249 2.3e-20 104.0 234 34.6
VMungo1309G3135 Vigna mungo HOM05D003457 ORTHO05D009249 2.3e-20 104.0 233 33.9
Sabra05G0139600 Salix brachista HOM05D003457 ORTHO05D009249 1.1e-19 101.7 273 33.3
Psat5g072040 Pisum sativum HOM05D003457 ORTHO05D009249 1.9e-19 100.9 241 34.9
TPR.G33664 Trifolium pratense HOM05D003457 ORTHO05D009249 1.9e-19 100.9 262 31.3
CDE02G1140 Ceratophyllum demersum HOM05D003457 ORTHO05D009249 2.5e-19 100.5 329 31.9
BcaB07g29912 Brassica carinata HOM05D003457 ORTHO05D009249 3.3e-19 100.1 312 28.8
Medtr3g092670 Medicago truncatula HOM05D003457 ORTHO05D009249 5.6e-19 99.4 228 34.6
A02p40300 Brassica napus HOM05D003457 ORTHO05D009249 7.3e-19 99.0 220 33.2
C02p60250 Brassica napus HOM05D003457 ORTHO05D009249 7.3e-19 99.0 227 32.2
CDE01G0392 Ceratophyllum demersum HOM05D003457 ORTHO05D009249 7.3e-19 99.0 329 29.8
Phvul.009G045300 Phaseolus vulgaris HOM05D003457 ORTHO05D009249 7.3e-19 99.0 226 35.8
BraA02t08999Z Brassica rapa HOM05D003457 ORTHO05D009249 9.6e-19 98.6 220 32.7
unitig_90.g27506 Utricularia gibba HOM05D003457 ORTHO05D009249 1.3e-18 98.2 165 47.3
BolC2t12082H Brassica oleracea HOM05D003457 ORTHO05D009249 1.6e-18 97.8 227 33.0
Lsat_1_v5_gn_7_39641 Lactuca sativa HOM05D003457 ORTHO05D009249 2.1e-18 97.4 185 40.0
Glyma.06G136400 Glycine max HOM05D003457 ORTHO05D009249 1.4e-17 94.7 227 35.7
BcaC03g17967 Brassica carinata HOM05D003457 ORTHO05D009249 5.3e-17 92.8 312 28.5
Lsat_1_v5_gn_5_150000 Lactuca sativa HOM05D003457 ORTHO05D009249 1.3e-15 88.2 179 38.5
Atru.chr12.2426 Acer truncatum HOM05D003457 ORTHO05D009249 1.7e-15 87.8 243 35.4
Lalb_Chr08g0239631 Lupinus albus HOM05D003457 ORTHO05D009249 2.1e-13 80.9 243 32.5
QL09p007211 Quercus lobata HOM05D003457 ORTHO05D009249 1.1e-11 75.1 329 29.5
PSO063G5804 Papaver somniferum HOM05D003457 ORTHO05D009249 3.3e-11 73.6 207 35.7
SEGI_37736 Sequoiadendron giganteum HOM05D013917 ORTHO05D013169 5.6e-11 72.8 252 27.4
GSVIVG01038640001 Vitis vinifera HOM05D003457 ORTHO05D009249 3.8e-07 60.1 90 46.7
ECA233G2997 Erigeron canadensis HOM05D003457 ORTHO05D009249 9.3e-06 55.5 269 26.4


User provided reference genes

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