Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022213 Camellia sinensis var. sinensis HOM05D004487 ORTHO05D005483 1.2e-76 289.7 141 100.0
CSS0015836 Camellia sinensis var. sinensis HOM05D004487 ORTHO05D005483 1.1e-67 260.0 140 92.9
CSS0002847 Camellia sinensis var. sinensis HOM05D004487 ORTHO05D005483 7.7e-18 94.4 49 91.8
CSS0025780 Camellia sinensis var. sinensis HOM05D004487 ORTHO05D005483 7.7e-18 94.4 49 91.8
GSVIVG01022203001 Vitis vinifera HOM05D004487 ORTHO05D005483 2.6e-13 79.3 49 83.7
Hma1.2p1_0375F.1_g138570 Hydrangea macrophylla HOM05D004487 ORTHO05D005483 3.3e-13 79.0 50 84.0
Hma1.2p1_0486F.1_g163280 Hydrangea macrophylla HOM05D004487 ORTHO05D005483 4.4e-13 78.6 50 82.0
vmacro21317 Vaccinium macrocarpon HOM05D004487 ORTHO05D005483 7.4e-13 77.8 57 71.9
Peaxi162Scf00171g00006 Petunia axillaris HOM05D004487 ORTHO05D005483 2.2e-12 76.3 64 68.8
Rhsim05G0180000 Rhododendron simsii HOM05D004487 ORTHO05D005483 2.2e-12 76.3 56 71.4
CiPaw.04G093900 Carya illinoinensis HOM05D004487 ORTHO05D005483 4.8e-12 75.1 50 82.0
FAN28G1272 Fragaria x ananassa HOM05D004487 ORTHO05D005483 4.8e-12 75.1 82 53.7
FAN28G1914 Fragaria x ananassa HOM05D004487 ORTHO05D005483 4.8e-12 75.1 82 53.7
QL06p033465 Quercus lobata HOM05D004487 ORTHO05D005483 4.8e-12 75.1 50 82.0
Ah.04g161200 Amaranthus hybridus HOM05D004487 ORTHO05D005483 6.3e-12 74.7 58 70.7
CAN.G861.28 Capsicum annuum HOM05D004487 ORTHO05D005483 8.2e-12 74.3 51 78.4
TWI53G0384 Tripterygium wilfordii HOM05D004487 ORTHO05D005483 8.2e-12 74.3 51 76.5
Nitab4.5_0007717g0020 Nicotiana tabacum HOM05D004487 ORTHO05D005483 1.1e-11 73.9 50 80.0
CDE04G3174 Ceratophyllum demersum HOM05D004487 ORTHO05D005483 1.4e-11 73.6 53 67.9
AUR62005250 Chenopodium quinoa HOM05D004487 ORTHO05D005483 1.4e-11 73.6 49 81.6
Solyc03g019910.3 Solanum lycopersicum HOM05D004487 ORTHO05D005483 1.4e-11 73.6 55 72.7
Sopen03g029710 Solanum pennellii HOM05D004487 ORTHO05D005483 1.4e-11 73.6 55 72.7
PGSC0003DMG400015213 Solanum tuberosum HOM05D004487 ORTHO05D005483 1.4e-11 73.6 55 72.7
ClCG05G021300 Citrullus lanatus HOM05D004487 ORTHO05D005483 1.8e-11 73.2 50 72.0
Nitab4.5_0001495g0020 Nicotiana tabacum HOM05D004487 ORTHO05D005483 3.1e-11 72.4 39 94.9
Prupe.8G078400 Prunus persica HOM05D004487 ORTHO05D005483 3.1e-11 72.4 50 78.0
Sc16g0008840 Simmondsia chinensis HOM05D004487 ORTHO05D005483 3.1e-11 72.4 48 77.1
Actinidia33369 Actinidia chinensis HOM05D004487 ORTHO05D005483 4.1e-11 72.0 49 77.6
Duzib147G1438 Durio zibethinus HOM05D004487 ORTHO05D005483 4.1e-11 72.0 39 92.3
MD01G1016500 Malus domestica HOM05D004487 ORTHO05D005483 4.1e-11 72.0 50 76.0
Thecc.01G110300 Theobroma cacao HOM05D004487 ORTHO05D005483 4.1e-11 72.0 39 92.3
arahy.Tifrunner.gnm1.ann1.0Q3DRY Arachis hypogaea HOM05D004487 ORTHO05D005483 5.3e-11 71.6 50 78.0
arahy.Tifrunner.gnm1.ann1.10QJ8K Arachis hypogaea HOM05D004487 ORTHO05D005483 5.3e-11 71.6 50 78.0
arahy.Tifrunner.gnm1.ann1.7417N6 Arachis hypogaea HOM05D004487 ORTHO05D005483 5.3e-11 71.6 50 78.0
arahy.Tifrunner.gnm1.ann1.NRP8RH Arachis hypogaea HOM05D004487 ORTHO05D005483 5.3e-11 71.6 50 78.0
arahy.Tifrunner.gnm1.ann1.S1NDRU Arachis hypogaea HOM05D004487 ORTHO05D005483 5.3e-11 71.6 50 78.0
arahy.Tifrunner.gnm1.ann1.Z7G166 Arachis hypogaea HOM05D004487 ORTHO05D005483 5.3e-11 71.6 50 78.0
Haze_05964 Corylus avellana HOM05D004487 ORTHO05D005483 5.3e-11 71.6 49 77.6
Potri.007G085100 Populus trichocarpa HOM05D004487 ORTHO05D005483 5.3e-11 71.6 50 78.0
Prupe.6G176600 Prunus persica HOM05D004487 ORTHO05D005483 5.3e-11 71.6 50 74.0
TWI74G0090 Tripterygium wilfordii HOM05D004487 ORTHO05D005483 5.3e-11 71.6 50 76.0
TAR626G1474 Trochodendron aralioides HOM05D004487 ORTHO05D005483 5.3e-11 71.6 43 83.7
vmacro18624 Vaccinium macrocarpon HOM05D004487 ORTHO05D005483 5.3e-11 71.6 49 75.5
EL10Ac4g09863 Beta vulgaris HOM05D004487 ORTHO05D005483 7.0e-11 71.2 50 74.0
CDE04G3300 Ceratophyllum demersum HOM05D004487 ORTHO05D005483 7.0e-11 71.2 52 67.3
arahy.Tifrunner.gnm1.ann1.9RVJ5A Arachis hypogaea HOM05D004487 ORTHO05D005483 9.1e-11 70.9 50 78.0
Glyma.09G092600 Glycine max HOM05D004487 ORTHO05D005483 9.1e-11 70.9 50 76.0
Glyma.15G199500 Glycine max HOM05D004487 ORTHO05D005483 9.1e-11 70.9 50 76.0
MD15G1334800 Malus domestica HOM05D004487 ORTHO05D005483 9.1e-11 70.9 50 74.0
Nn8g40276 Nelumbo nucifera HOM05D004487 ORTHO05D005483 9.1e-11 70.9 39 89.7
TAR625G1215 Trochodendron aralioides HOM05D004487 ORTHO05D005483 1.2e-10 70.5 43 81.4
arahy.Tifrunner.gnm1.ann1.4M30AQ Arachis hypogaea HOM05D004487 ORTHO05D005483 1.6e-10 70.1 51 74.5
arahy.Tifrunner.gnm1.ann1.L7ETT7 Arachis hypogaea HOM05D004487 ORTHO05D005483 1.6e-10 70.1 51 74.5
Cc02_g15410 Coffea canephora HOM05D004487 ORTHO05D005483 1.6e-10 70.1 38 92.1
HanXRQChr14g0458831 Helianthus annuus HOM05D004487 ORTHO05D005483 1.6e-10 70.1 39 89.7
Manes.12G140400 Manihot esculenta HOM05D004487 ORTHO05D005483 1.6e-10 70.1 50 78.0
Phvul.009G211400 Phaseolus vulgaris HOM05D004487 ORTHO05D005483 1.6e-10 70.1 50 74.0
Ca_23004_v3 Cicer arietinum L. HOM05D004487 ORTHO05D005483 2.0e-10 69.7 50 74.0
ECA238G1615 Erigeron canadensis HOM05D004487 ORTHO05D005483 2.0e-10 69.7 39 87.2
Nitab4.5_0000477g0120 Nicotiana tabacum HOM05D004487 ORTHO05D005483 2.0e-10 69.7 40 87.5
Sabra07G0070400 Salix brachista HOM05D004487 ORTHO05D005483 2.0e-10 69.7 52 73.1
TPR.G33715 Trifolium pratense HOM05D004487 ORTHO05D005483 2.0e-10 69.7 50 74.0
CANSAT01G2370 Cannabis sativa HOM05D004487 ORTHO05D005483 2.6e-10 69.3 39 92.3
AUR62000713 Chenopodium quinoa HOM05D004487 ORTHO05D005483 2.6e-10 69.3 49 79.6
COL.COLO4_11036 Corchorus olitorius HOM05D004487 ORTHO05D005483 2.6e-10 69.3 38 92.1
FvH4_1g21950 Fragaria vesca HOM05D004487 ORTHO05D005483 2.6e-10 69.3 50 74.0
FAN19G1427 Fragaria x ananassa HOM05D004487 ORTHO05D005483 2.6e-10 69.3 50 74.0
FAN23G0375 Fragaria x ananassa HOM05D004487 ORTHO05D005483 2.6e-10 69.3 50 74.0
Lalb_Chr11g0075201 Lupinus albus HOM05D004487 ORTHO05D005483 2.6e-10 69.3 39 89.7
ClCG01G019130 Citrullus lanatus HOM05D004487 ORTHO05D005483 3.5e-10 68.9 43 79.1
MELO3C012399.2 Cucumis melo HOM05D004487 ORTHO05D005483 3.5e-10 68.9 43 79.1
CsaV3_5G036000 Cucumis sativus L. HOM05D004487 ORTHO05D005483 3.5e-10 68.9 43 79.1
CsaV3_6G045820 Cucumis sativus L. HOM05D004487 ORTHO05D005483 3.5e-10 68.9 43 79.1
FAN19G3081 Fragaria x ananassa HOM05D004487 ORTHO05D005483 3.5e-10 68.9 82 52.4
FAN26G2580 Fragaria x ananassa HOM05D004487 ORTHO05D005483 3.5e-10 68.9 50 72.0
Nitab4.5_0007222g0010 Nicotiana tabacum HOM05D004487 ORTHO05D005483 4.5e-10 68.6 58 65.5
PGR004G1100 Punica granatum HOM05D004487 ORTHO05D005483 4.5e-10 68.6 49 71.4
Atru.chr3.204 Acer truncatum HOM05D004487 ORTHO05D005483 5.9e-10 68.2 50 74.0
Ca_25628_v3 Cicer arietinum L. HOM05D004487 ORTHO05D005483 5.9e-10 68.2 53 67.9
MELO3C007790.2 Cucumis melo HOM05D004487 ORTHO05D005483 5.9e-10 68.2 39 84.6
DCAR_014253 Daucus carota HOM05D004487 ORTHO05D005483 5.9e-10 68.2 54 68.5
Gohir.1Z049552 Gossypium hirsutum HOM05D004487 ORTHO05D005483 5.9e-10 68.2 50 72.0
Gohir.A11G053300 Gossypium hirsutum HOM05D004487 ORTHO05D005483 5.9e-10 68.2 50 72.0
Gohir.D11G056800 Gossypium hirsutum HOM05D004487 ORTHO05D005483 5.9e-10 68.2 50 72.0
Gorai.007G062000 Gossypium raimondii HOM05D004487 ORTHO05D005483 5.9e-10 68.2 50 72.0
HanXRQChr07g0202331 Helianthus annuus HOM05D004487 ORTHO05D005483 5.9e-10 68.2 50 70.0
Nn2g14563 Nelumbo nucifera HOM05D004487 ORTHO05D005483 5.9e-10 68.2 39 87.2
MSTRG.14740 Avicennia marina HOM05D004487 ORTHO05D005483 7.7e-10 67.8 49 73.5
Lj3g0008934 Lotus japonicus HOM05D004487 ORTHO05D005483 7.7e-10 67.8 50 74.0
Psat2g176760 Pisum sativum HOM05D004487 ORTHO05D005483 7.7e-10 67.8 49 75.5
TPR.G36682 Trifolium pratense HOM05D005330 ORTHO05D006489 7.7e-10 67.8 42 81.0
Aqoxy2G03854 Aquilegia oxysepala HOM05D004487 ORTHO05D005483 1.0e-09 67.4 40 87.5
arahy.Tifrunner.gnm1.ann1.32WU9K Arachis hypogaea HOM05D004487 ORTHO05D005483 1.3e-09 67.0 50 74.0
arahy.Tifrunner.gnm1.ann1.I45DC0 Arachis hypogaea HOM05D004487 ORTHO05D005483 1.3e-09 67.0 50 74.0
Migut.H01422 Erythranthe guttata HOM05D004487 ORTHO05D005483 1.3e-09 67.0 49 73.5
Lsat_1_v5_gn_2_120680 Lactuca sativa HOM05D004487 ORTHO05D005483 1.3e-09 67.0 39 84.6
Lj2A942G27 Lonicera japonica HOM05D004487 ORTHO05D005483 1.7e-09 66.6 55 65.5
Lj6g0018564 Lotus japonicus HOM05D004487 ORTHO05D005483 2.2e-09 66.2 39 87.2
Oeu040918.3 Olea europaea HOM05D004487 ORTHO05D005483 2.2e-09 66.2 38 86.8
RcHm_v2.0_Chr2g0115971 Rosa chinensis HOM05D004487 ORTHO05D005483 2.9e-09 65.9 50 72.0
FvH4_1g25670 Fragaria vesca HOM05D004487 ORTHO05D005483 3.8e-09 65.5 39 82.1
Zm00001eb192330 Zea mays HOM05D004487 ORTHO05D005483 3.8e-09 65.5 51 66.7
AT4G39630 Arabidopsis thaliana HOM05D004487 ORTHO05D005483 8.5e-09 64.3 33 90.9
Potri.005G082500 Populus trichocarpa HOM05D004487 ORTHO05D005483 8.5e-09 64.3 50 66.0
Sabra05G0067500 Salix brachista HOM05D004487 ORTHO05D005483 8.5e-09 64.3 39 82.1
Os08g0290400 Oryza sativa ssp. japonica HOM05D004487 ORTHO05D005483 1.1e-08 63.9 50 70.0
ATR0210G008 Amborella trichopoda HOM05D004487 ORTHO05D005483 1.5e-08 63.5 38 81.6
arahy.Tifrunner.gnm1.ann1.Y72RXW Arachis hypogaea HOM05D004487 ORTHO05D005483 1.5e-08 63.5 50 70.0
Lj2A929T16 Lonicera japonica HOM05D004487 ORTHO05D005483 1.5e-08 63.5 43 76.7
SGA_v2.0_scaffold106G30591 Striga asiatica HOM05D004487 ORTHO05D005483 1.5e-08 63.5 38 84.2
A04p10610 Brassica napus HOM05D004487 ORTHO05D005483 1.9e-08 63.2 48 68.8
Eucgr.I00528 Eucalyptus grandis HOM05D004487 ORTHO05D005483 1.9e-08 63.2 59 61.0
BraA04t16724Z Brassica rapa HOM05D004487 ORTHO05D005483 2.5e-08 62.8 86 48.8
Carub.0007s0150 Capsella rubella HOM05D004487 ORTHO05D005483 2.5e-08 62.8 39 82.1
unitig_22.g6757 Utricularia gibba HOM05D004487 ORTHO05D005483 2.5e-08 62.8 49 71.4
BolC4t26003H Brassica oleracea HOM05D004487 ORTHO05D005483 3.2e-08 62.4 74 52.7
Ciclev10026392m.g Citrus clementina HOM05D004487 ORTHO05D005483 3.2e-08 62.4 33 87.9
Aa31LG6G15640 Aethionema arabicum HOM05D004487 ORTHO05D005483 4.2e-08 62.0 33 87.9
AL7G11780 Arabidopsis lyrata HOM05D004487 ORTHO05D005483 4.2e-08 62.0 33 87.9
CARHR247100 Cardamine hirsuta HOM05D004487 ORTHO05D005483 4.2e-08 62.0 33 87.9
Actinidia08329 Actinidia chinensis HOM05D004487 ORTHO05D005483 5.5e-08 61.6 39 79.5
Thhalv10027902m.g Eutrema salsugineum HOM05D004487 ORTHO05D005483 5.5e-08 61.6 44 70.5
VMungo1309G0247 Vigna mungo HOM05D004487 ORTHO05D005483 5.5e-08 61.6 50 64.0
Oeu043116.1 Olea europaea HOM05D004487 ORTHO05D005483 9.4e-08 60.8 40 77.5
SHI54251 Sapria himalayana HOM05D004487 ORTHO05D005483 9.4e-08 60.8 38 78.9
Sp7g36260 Schrenkiella parvula HOM05D004487 ORTHO05D005483 9.4e-08 60.8 43 74.4
THA.LOC104807718 Tarenaya hassleriana HOM05D004487 ORTHO05D005483 1.6e-07 60.1 33 84.8
CARHR215520 Cardamine hirsuta HOM05D004487 ORTHO05D005483 2.1e-07 59.7 33 84.8
Sp7g04740 Schrenkiella parvula HOM05D004487 ORTHO05D005483 2.1e-07 59.7 33 84.8
BcaC02g09572 Brassica carinata HOM05D004487 ORTHO05D005483 6.1e-07 58.2 33 81.8
C04p44290 Brassica napus HOM05D004487 ORTHO05D005483 6.1e-07 58.2 33 81.8
HPP92_005242 Vanilla planifolia HOM05D004487 ORTHO05D005483 6.1e-07 58.2 39 74.4
SEGI_02201 Sequoiadendron giganteum HOM05D004487 ORTHO05D005483 8.0e-07 57.8 43 60.5
BcaB06g27071 Brassica carinata HOM05D004487 ORTHO05D005483 1.0e-06 57.4 33 81.8
SGA_v2.0_scaffold83G26423 Striga asiatica HOM05D004487 ORTHO05D005483 4.0e-06 55.5 39 71.8


User provided reference genes

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