Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022207 Camellia sinensis var. sinensis HOM05D000110 ORTHO05D043276 4.9e-85 317.8 161 100.0
Nn2g10389 Nelumbo nucifera HOM05D000110 ORTHO05D000024 1.8e-18 96.7 169 46.7
Lj2P1060T16 Lonicera japonica HOM05D000110 ORTHO05D000024 3.3e-17 92.4 170 45.3
TAR633G2140 Trochodendron aralioides HOM05D000110 ORTHO05D000024 1.4e-15 87.0 171 42.7
Lsat_1_v5_gn_5_167880 Lactuca sativa HOM05D000110 ORTHO05D000024 1.8e-15 86.7 176 40.3
Dinv01581 Davidia involucrata HOM05D000110 ORTHO05D043276 2.6e-14 82.8 164 44.5
Rhsim13G0084000 Rhododendron simsii HOM05D000110 ORTHO05D000024 5.9e-14 81.6 169 40.8
TAR369G0841 Trochodendron aralioides HOM05D000110 ORTHO05D000024 5.9e-14 81.6 170 38.2
TAR623G1414 Trochodendron aralioides HOM05D000110 ORTHO05D000024 5.9e-14 81.6 168 40.5
Aqoxy4G02948 Aquilegia oxysepala HOM05D000110 ORTHO05D000024 3.8e-13 79.0 171 40.9
Cc01_g12730 Coffea canephora HOM05D000110 ORTHO05D000024 3.8e-13 79.0 160 40.0
vmacro03085 Vaccinium macrocarpon HOM05D000110 ORTHO05D000024 6.5e-13 78.2 162 42.0
Manes.04G033900 Manihot esculenta HOM05D000110 ORTHO05D000024 1.1e-12 77.4 164 43.3
HanXRQChr14g0445671 Helianthus annuus HOM05D000110 ORTHO05D000024 5.5e-12 75.1 164 40.9
Dinv31452 Davidia involucrata HOM05D000110 ORTHO05D000024 7.2e-12 74.7 173 39.3
Thecc.10G043900 Theobroma cacao HOM05D000110 ORTHO05D000024 7.2e-12 74.7 176 39.2
Nn5g26935 Nelumbo nucifera HOM05D000110 ORTHO05D000024 1.2e-11 73.9 168 39.9
Rhsim01G0226800 Rhododendron simsii HOM05D000110 ORTHO05D000024 1.6e-11 73.6 159 41.5
Thecc.09G323600 Theobroma cacao HOM05D000110 ORTHO05D000024 1.6e-11 73.6 164 40.2
QL08p059221 Quercus lobata HOM05D000110 ORTHO05D000024 2.1e-11 73.2 174 42.5
HanXRQChr15g0493201 Helianthus annuus HOM05D000110 ORTHO05D000024 3.6e-11 72.4 168 38.7
Duzib168G0327 Durio zibethinus HOM05D000110 ORTHO05D000024 4.7e-11 72.0 165 41.2
Duzib114G0993 Durio zibethinus HOM05D000110 ORTHO05D000024 6.1e-11 71.6 169 40.2
ECA248G2023 Erigeron canadensis HOM05D000110 ORTHO05D000024 8.0e-11 71.2 176 36.9
HanXRQChr12g0379571 Helianthus annuus HOM05D000110 ORTHO05D000024 8.0e-11 71.2 163 38.0
MBI05_g43546_MAGBIO Magnolia biondii HOM05D000110 ORTHO05D000024 1.0e-10 70.9 181 36.5
CSS0011843 Camellia sinensis var. sinensis HOM05D000110 ORTHO05D000024 3.0e-10 69.3 171 37.4
Actinidia37212 Actinidia chinensis HOM05D000110 ORTHO05D000024 3.9e-10 68.9 164 40.9
Duzib170G0602 Durio zibethinus HOM05D000110 ORTHO05D000024 3.9e-10 68.9 161 39.8
Potri.009G029500 Populus trichocarpa HOM05D000110 ORTHO05D000024 3.9e-10 68.9 163 36.2
Duzib150G1172 Durio zibethinus HOM05D000110 ORTHO05D000024 8.8e-10 67.8 161 39.1
Manes.11G131600 Manihot esculenta HOM05D000110 ORTHO05D000024 8.8e-10 67.8 157 41.4
Actinidia33863 Actinidia chinensis HOM05D000110 ORTHO05D000024 1.1e-09 67.4 155 39.4
MBI14_g31250_MAGBIO Magnolia biondii HOM05D000110 ORTHO05D000024 1.5e-09 67.0 173 35.8
Sabra09G0020500 Salix brachista HOM05D000110 ORTHO05D000024 1.5e-09 67.0 177 37.9
CSS0037953 Camellia sinensis var. sinensis HOM05D000110 ORTHO05D000024 2.0e-09 66.6 172 36.6
Gohir.D05G096600 Gossypium hirsutum HOM05D000110 ORTHO05D000024 2.0e-09 66.6 160 37.5
Hma1.2p1_0838F.1_g226290 Hydrangea macrophylla HOM05D000110 ORTHO05D000024 2.0e-09 66.6 162 36.4
Potri.001G238400 Populus trichocarpa HOM05D000110 ORTHO05D000024 2.0e-09 66.6 175 33.1
TWI79G1097 Tripterygium wilfordii HOM05D000110 ORTHO05D000024 2.6e-09 66.2 159 40.3
Cpa.g.sc361.3 Carica papaya HOM05D000110 ORTHO05D000024 3.3e-09 65.9 181 37.0
ECA247G0484 Erigeron canadensis HOM05D000110 ORTHO05D000024 3.3e-09 65.9 169 34.3
Gorai.009G100100 Gossypium raimondii HOM05D000110 ORTHO05D000024 3.3e-09 65.9 162 37.0
Gohir.A05G096400 Gossypium hirsutum HOM05D000110 ORTHO05D000024 4.4e-09 65.5 159 36.5
Duzib106G1722 Durio zibethinus HOM05D000110 ORTHO05D000024 9.7e-09 64.3 168 38.1
Peaxi162Scf00679g00310 Petunia axillaris HOM05D000110 ORTHO05D000024 1.3e-08 63.9 168 36.3
HanXRQChr05g0134731 Helianthus annuus HOM05D000110 ORTHO05D000024 2.2e-08 63.2 167 36.5
Gorai.001G109300 Gossypium raimondii HOM05D000110 ORTHO05D000024 2.8e-08 62.8 176 35.2
MD03G1096400 Malus domestica HOM05D000110 ORTHO05D000024 3.7e-08 62.4 187 32.6
Lsat_1_v5_gn_9_23080 Lactuca sativa HOM05D000110 ORTHO05D000024 4.8e-08 62.0 175 36.6
COL.COLO4_00307 Corchorus olitorius HOM05D000110 ORTHO05D000024 6.3e-08 61.6 157 35.0
Lsat_1_v5_gn_8_75820 Lactuca sativa HOM05D000110 ORTHO05D000024 1.1e-07 60.8 170 36.5
ECA236G3378 Erigeron canadensis HOM05D000110 ORTHO05D000024 1.4e-07 60.5 164 32.9
Gohir.A07G096900 Gossypium hirsutum HOM05D000110 ORTHO05D000024 1.4e-07 60.5 175 34.3
FAN21G1269 Fragaria x ananassa HOM05D000110 ORTHO05D000024 3.1e-07 59.3 183 36.1
CSS0036179 Camellia sinensis var. sinensis HOM05D000110 ORTHO05D000024 4.1e-07 58.9 169 34.3
Gohir.A08G000200 Gossypium hirsutum HOM05D000110 ORTHO05D000024 4.1e-07 58.9 159 35.2
Gohir.D08G011200 Gossypium hirsutum HOM05D000110 ORTHO05D000024 4.1e-07 58.9 159 35.2
Gorai.004G004800 Gossypium raimondii HOM05D000110 ORTHO05D000024 4.1e-07 58.9 159 35.2
HanXRQChr04g0115531 Helianthus annuus HOM05D000110 ORTHO05D000024 4.1e-07 58.9 163 36.2
FAN16G2478 Fragaria x ananassa HOM05D000110 ORTHO05D000024 7.0e-07 58.2 186 35.5
FAN11G2714 Fragaria x ananassa HOM05D000110 ORTHO05D000024 9.1e-07 57.8 185 35.1
Glyma.18G176300 Glycine max HOM05D000110 ORTHO05D000024 9.1e-07 57.8 175 34.3
CDE04G1426 Ceratophyllum demersum HOM05D000110 ORTHO05D000024 1.2e-06 57.4 158 33.5
Dinv26004 Davidia involucrata HOM05D000110 ORTHO05D000024 1.2e-06 57.4 152 39.5
Nitab4.5_0001304g0070 Nicotiana tabacum HOM05D000110 ORTHO05D000024 1.2e-06 57.4 173 33.5
Sabra16G0143700 Salix brachista HOM05D000110 ORTHO05D000024 1.2e-06 57.4 168 36.9
Sopen06g032440 Solanum pennellii HOM05D000110 ORTHO05D000024 1.2e-06 57.4 182 31.9
Phvul.008G099400 Phaseolus vulgaris HOM05D000110 ORTHO05D000024 1.6e-06 57.0 178 33.1
Nitab4.5_0007461g0020 Nicotiana tabacum HOM05D000110 ORTHO05D000024 3.5e-06 55.8 162 35.8
FvH4_3g35790 Fragaria vesca HOM05D000110 ORTHO05D000024 5.9e-06 55.1 192 33.9
PSO151G0056 Papaver somniferum HOM05D000110 ORTHO05D000024 5.9e-06 55.1 190 32.1
PSO339G3392 Papaver somniferum HOM05D000110 ORTHO05D000024 5.9e-06 55.1 146 37.7
Duzib128G0630 Durio zibethinus HOM05D000110 ORTHO05D000024 7.7e-06 54.7 178 32.6
Prupe.6G079500 Prunus persica HOM05D000110 ORTHO05D000024 7.7e-06 54.7 184 29.9


User provided reference genes

Program Settings