Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022204 Camellia sinensis var. sinensis HOM05D001139 ORTHO05D043337 1.4e-95 352.8 167 100.0
CSS0027117 Camellia sinensis var. sinensis HOM05D000185 ORTHO05D043337 2.3e-85 318.9 180 87.8
Dinv10910 Davidia involucrata HOM05D001139 ORTHO05D000936 4.4e-20 102.1 73 68.5
Dinv18538 Davidia involucrata HOM05D001139 ORTHO05D000936 4.8e-19 98.6 74 67.6
Actinidia12492 Actinidia chinensis HOM05D001139 ORTHO05D000936 2.4e-18 96.3 71 66.2
Hma1.2p1_0613F.1_g189340 Hydrangea macrophylla HOM05D001139 ORTHO05D000936 2.9e-16 89.4 76 60.5
Dinv22312 Davidia involucrata HOM05D001139 ORTHO05D000936 1.9e-15 86.7 74 59.5
Rhsim04G0057000 Rhododendron simsii HOM05D001139 ORTHO05D000936 8.0e-14 81.3 86 50.0
Nn1g03709 Nelumbo nucifera HOM05D001139 ORTHO05D000936 1.4e-13 80.5 69 56.5
CSS0019773 Camellia sinensis var. sinensis HOM05D000857 ORTHO05D003259 1.2e-12 77.4 46 73.9
TWI18G1031 Tripterygium wilfordii HOM05D001139 ORTHO05D000936 7.5e-12 74.7 71 52.1
Haze_09594 Corylus avellana HOM05D001139 ORTHO05D000936 2.2e-11 73.2 72 50.0
vmacro09322 Vaccinium macrocarpon HOM05D001139 ORTHO05D000936 2.8e-11 72.8 125 36.0
Actinidia10704 Actinidia chinensis HOM05D001139 ORTHO05D000936 3.7e-11 72.4 65 56.9
CiPaw.11G183100 Carya illinoinensis HOM05D001139 ORTHO05D000936 3.7e-11 72.4 65 55.4
CANSAT11G2613 Cannabis sativa HOM05D001139 ORTHO05D000936 4.8e-11 72.0 65 58.5
Cfa020434 Carpinus fangiana HOM05D001139 ORTHO05D000936 4.8e-11 72.0 65 52.3
Hma1.2p1_1130F.1_g259940 Hydrangea macrophylla HOM05D001139 ORTHO05D000936 4.8e-11 72.0 69 49.3
CSS0036418 Camellia sinensis var. sinensis HOM05D000185 ORTHO05D000105 6.3e-11 71.6 66 62.1
CSS0039113 Camellia sinensis var. sinensis HOM05D000185 ORTHO05D000105 6.3e-11 71.6 66 62.1
QL08p013457 Quercus lobata HOM05D001139 ORTHO05D000936 6.3e-11 71.6 69 50.7
QL08p013775 Quercus lobata HOM05D001139 ORTHO05D000936 6.3e-11 71.6 69 50.7
Psat7g122200 Pisum sativum HOM05D001139 ORTHO05D000936 8.2e-11 71.2 66 53.0
Phvul.011G141300 Phaseolus vulgaris HOM05D001139 ORTHO05D000936 1.1e-10 70.9 65 55.4
CSS0024853 Camellia sinensis var. sinensis HOM05D000185 ORTHO05D000105 1.4e-10 70.5 66 60.6
CSS0025308 Camellia sinensis var. sinensis HOM05D001139 ORTHO05D000936 1.4e-10 70.5 65 55.4
CSS0028637 Camellia sinensis var. sinensis HOM05D001139 ORTHO05D000936 1.4e-10 70.5 65 55.4
CSS0039734 Camellia sinensis var. sinensis HOM05D000185 ORTHO05D000105 1.4e-10 70.5 65 61.5
Ca_18844_v3 Cicer arietinum L. HOM05D005332 ORTHO05D006861 1.4e-10 70.5 65 52.3
CSS0002804 Camellia sinensis var. sinensis HOM05D000185 ORTHO05D000105 1.8e-10 70.1 62 64.5
Rhsim06G0156800 Rhododendron simsii HOM05D001139 ORTHO05D000936 1.8e-10 70.1 94 42.6
vmacro11770 Vaccinium macrocarpon HOM05D001139 ORTHO05D000936 1.8e-10 70.1 67 55.2
CiPaw.12G126000 Carya illinoinensis HOM05D001139 ORTHO05D000936 2.4e-10 69.7 65 53.8
TPR.G25926 Trifolium pratense HOM05D001139 ORTHO05D000936 2.4e-10 69.7 65 56.9
MBI02_g29698_MAGBIO Magnolia biondii HOM05D001139 ORTHO05D000936 3.1e-10 69.3 65 53.8
MSTRG.6888 Avicennia marina HOM05D001139 ORTHO05D000936 4.1e-10 68.9 69 52.2
CSS0001888 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 4.1e-10 68.9 41 68.3
CSS0008592 Camellia sinensis var. sinensis HOM05D000185 ORTHO05D000105 4.1e-10 68.9 62 62.9
CSS0044896 Camellia sinensis var. sinensis HOM05D000185 ORTHO05D000105 4.1e-10 68.9 62 62.9
CSS0006006 Camellia sinensis var. sinensis HOM05D000185 ORTHO05D000105 5.3e-10 68.6 65 58.5
Hma1.2p1_2644F.1_g325940 Hydrangea macrophylla HOM05D001139 ORTHO05D000936 5.3e-10 68.6 65 50.8
Glyma.06G266800 Glycine max HOM05D001139 ORTHO05D000936 7.0e-10 68.2 65 55.4
Actinidia35313 Actinidia chinensis HOM05D001139 ORTHO05D000936 9.1e-10 67.8 65 52.3
vmacro09749 Vaccinium macrocarpon HOM05D001139 ORTHO05D000936 9.1e-10 67.8 65 55.4
Nn1g06963 Nelumbo nucifera HOM05D001139 ORTHO05D000936 1.6e-09 67.0 69 50.7
Ciclev10016381m.g Citrus clementina HOM05D001139 ORTHO05D000936 2.0e-09 66.6 76 52.6
arahy.Tifrunner.gnm1.ann1.YHH73E Arachis hypogaea HOM05D001139 ORTHO05D000936 2.7e-09 66.2 74 44.6
arahy.Tifrunner.gnm1.ann1.ZSV3DU Arachis hypogaea HOM05D001139 ORTHO05D000936 2.7e-09 66.2 74 44.6
Hma1.2p1_1054F.1_g252450 Hydrangea macrophylla HOM05D001139 ORTHO05D000936 2.7e-09 66.2 65 50.8
Lj3g0008754 Lotus japonicus HOM05D001139 ORTHO05D000936 2.7e-09 66.2 67 58.2
CSS0040594 Camellia sinensis var. sinensis HOM05D000185 ORTHO05D000105 3.5e-09 65.9 62 61.3
MD11G1227800 Malus domestica HOM05D001139 ORTHO05D000936 3.5e-09 65.9 69 50.7
QL08p033978 Quercus lobata HOM05D001139 ORTHO05D000936 4.5e-09 65.5 90 43.3
MD05G1336500 Malus domestica HOM05D001139 ORTHO05D000936 5.9e-09 65.1 70 44.3
VMungo1127G1348 Vigna mungo HOM05D001139 ORTHO05D000936 5.9e-09 65.1 65 47.7
CSS0020817 Camellia sinensis var. sinensis HOM05D000185 ORTHO05D001554 7.7e-09 64.7 57 63.2
Migut.H01862 Erythranthe guttata HOM05D001139 ORTHO05D000936 7.7e-09 64.7 76 51.3
Gohir.A01G013500 Gossypium hirsutum HOM05D001139 ORTHO05D000936 7.7e-09 64.7 72 45.8
Gohir.D01G014800 Gossypium hirsutum HOM05D001139 ORTHO05D000936 7.7e-09 64.7 72 45.8
Gorai.002G016500 Gossypium raimondii HOM05D001139 ORTHO05D000936 7.7e-09 64.7 72 45.8
Aqoxy4G02124 Aquilegia oxysepala HOM05D001139 ORTHO05D000936 1.0e-08 64.3 65 52.3
CSS0028789 Camellia sinensis var. sinensis HOM05D000185 ORTHO05D000105 1.0e-08 64.3 63 60.3
CSS0045003 Camellia sinensis var. sinensis HOM05D000185 ORTHO05D000105 1.0e-08 64.3 62 59.7
Migut.M01814 Erythranthe guttata HOM05D001139 ORTHO05D000936 1.0e-08 64.3 74 48.6
Atru.chr6.3130 Acer truncatum HOM05D001139 ORTHO05D000936 1.3e-08 63.9 72 50.0
MD03G1212600 Malus domestica HOM05D001139 ORTHO05D000936 1.3e-08 63.9 65 50.8
TAR629G1325 Trochodendron aralioides HOM05D001139 ORTHO05D000936 1.3e-08 63.9 67 52.2
CiPaw.03G163600 Carya illinoinensis HOM05D001139 ORTHO05D000936 1.7e-08 63.5 71 45.1
Prupe.4G201500 Prunus persica HOM05D001139 ORTHO05D000936 1.7e-08 63.5 69 50.7
GSVIVG01030640001 Vitis vinifera HOM05D001139 ORTHO05D000936 1.7e-08 63.5 55 60.0
DCAR_021193 Daucus carota HOM05D001139 ORTHO05D000936 2.9e-08 62.8 90 46.7
Cc05_g13180 Coffea canephora HOM05D001139 ORTHO05D000936 3.8e-08 62.4 69 52.2
PGSC0003DMG400026168 Solanum tuberosum HOM05D001139 ORTHO05D000936 3.8e-08 62.4 74 43.2
Eucgr.F03420 Eucalyptus grandis HOM05D001139 ORTHO05D000936 5.0e-08 62.0 69 46.4
FAN25G1929 Fragaria x ananassa HOM05D001139 ORTHO05D000936 5.0e-08 62.0 67 49.3
PGR083G1547 Punica granatum HOM05D001139 ORTHO05D000936 5.0e-08 62.0 60 60.0
Glyma.12G136300 Glycine max HOM05D001139 ORTHO05D000936 6.5e-08 61.6 65 49.2
MD10G1312000 Malus domestica HOM05D001139 ORTHO05D000936 6.5e-08 61.6 70 41.4
Sed0003408 Sechium edule HOM05D001139 ORTHO05D000936 6.5e-08 61.6 64 40.6
Solyc07g052670.3 Solanum lycopersicum HOM05D001139 ORTHO05D000936 6.5e-08 61.6 74 43.2
Sopen07g026270 Solanum pennellii HOM05D001139 ORTHO05D000936 6.5e-08 61.6 74 43.2
CAN.G1587.4 Capsicum annuum HOM05D001139 ORTHO05D000936 8.5e-08 61.2 74 43.2
Manes.16G017300 Manihot esculenta HOM05D001139 ORTHO05D000936 1.1e-07 60.8 67 49.3
Prupe.4G029000 Prunus persica HOM05D001139 ORTHO05D000936 1.1e-07 60.8 67 43.3
GSVIVG01014589001 Vitis vinifera HOM05D001139 ORTHO05D000936 1.1e-07 60.8 65 49.2
CSS0010436 Camellia sinensis var. sinensis HOM05D005311 ORTHO05D006160 1.5e-07 60.5 44 63.6
FvH4_3g21720 Fragaria vesca HOM05D001139 ORTHO05D000936 1.5e-07 60.5 66 48.5
FAN21G0033 Fragaria x ananassa HOM05D001139 ORTHO05D000936 1.5e-07 60.5 66 48.5
Oeu062621.1 Olea europaea HOM05D001139 ORTHO05D000936 1.5e-07 60.5 74 44.6
RhsimUnG0253400 Rhododendron simsii HOM05D001139 ORTHO05D000936 1.5e-07 60.5 66 48.5
MSTRG.12953 Avicennia marina HOM05D001139 ORTHO05D000936 1.9e-07 60.1 74 47.3
MSTRG.14412 Avicennia marina HOM05D001139 ORTHO05D000936 1.9e-07 60.1 74 47.3
CSS0038006 Camellia sinensis var. sinensis HOM05D000103 ORTHO05D000049 1.9e-07 60.1 74 44.6
Dinv17846 Davidia involucrata HOM05D001139 ORTHO05D000936 1.9e-07 60.1 69 44.9
FAN16G3065 Fragaria x ananassa HOM05D001139 ORTHO05D000936 1.9e-07 60.1 66 48.5
TWI38G1309 Tripterygium wilfordii HOM05D001139 ORTHO05D000936 1.9e-07 60.1 66 47.0
CSS0038605 Camellia sinensis var. sinensis HOM05D002730 ORTHO05D003261 3.2e-07 59.3 67 50.7
CSS0042977 Camellia sinensis var. sinensis HOM05D000185 ORTHO05D000105 4.2e-07 58.9 34 82.4
ECA233G3115 Erigeron canadensis HOM05D001139 ORTHO05D000936 4.2e-07 58.9 83 45.8
Lsat_1_v5_gn_5_5640 Lactuca sativa HOM05D001139 ORTHO05D000936 4.2e-07 58.9 68 51.5
Lj8C165T10 Lonicera japonica HOM05D001139 ORTHO05D000936 4.2e-07 58.9 66 45.5
Hund02140 Selenicereus undatus HOM05D001139 ORTHO05D000936 4.2e-07 58.9 74 50.0
Thecc.02G163000 Theobroma cacao HOM05D001139 ORTHO05D000936 5.5e-07 58.5 72 47.2
vmacro03736 Vaccinium macrocarpon HOM05D001139 ORTHO05D000936 5.5e-07 58.5 69 43.5
Duzib052G0240 Durio zibethinus HOM05D001139 ORTHO05D000936 7.2e-07 58.2 72 47.2
Actinidia09958 Actinidia chinensis HOM05D001139 ORTHO05D000936 1.2e-06 57.4 65 47.7
Rhsim13G0162200 Rhododendron simsii HOM05D001139 ORTHO05D000936 1.2e-06 57.4 69 43.5
CSS0013349 Camellia sinensis var. sinensis HOM05D000185 ORTHO05D000105 1.6e-06 57.0 34 79.4
CsaV3_3G022870 Cucumis sativus L. HOM05D001139 ORTHO05D000936 1.6e-06 57.0 65 47.7
Nitab4.5_0000397g0120 Nicotiana tabacum HOM05D001139 ORTHO05D000936 1.6e-06 57.0 74 41.9
Nitab4.5_0002238g0060 Nicotiana tabacum HOM05D001139 ORTHO05D000936 2.1e-06 56.6 74 41.9
PSO832G2067 Papaver somniferum HOM05D001139 ORTHO05D000936 2.1e-06 56.6 65 49.2
SGA_v2.0_scaffold416G51222 Striga asiatica HOM05D001139 ORTHO05D000936 2.1e-06 56.6 70 47.1
TAR624G1103 Trochodendron aralioides HOM05D001139 ORTHO05D000936 2.1e-06 56.6 76 48.7
Cpa.g.sc81.11 Carica papaya HOM05D001139 ORTHO05D000936 2.7e-06 56.2 70 44.3
CsaV3_3G022930 Cucumis sativus L. HOM05D001139 ORTHO05D000936 2.7e-06 56.2 65 46.2
Lalb_Chr14g0366061 Lupinus albus HOM05D001139 ORTHO05D000936 2.7e-06 56.2 66 48.5
Medtr4g081370 Medicago truncatula HOM05D001139 ORTHO05D000936 2.7e-06 56.2 66 47.0
PGSC0003DMG400019263 Solanum tuberosum HOM05D001139 ORTHO05D000936 2.7e-06 56.2 74 44.6
unitig_578.g16763 Utricularia gibba HOM05D001139 ORTHO05D000936 2.7e-06 56.2 78 43.6
CSS0021055 Camellia sinensis var. sinensis HOM05D000185 ORTHO05D000105 3.6e-06 55.8 62 53.2
CSS0034995 Camellia sinensis var. sinensis HOM05D000185 ORTHO05D000105 4.7e-06 55.5 34 79.4
COL.COLO4_13001 Corchorus olitorius HOM05D001139 ORTHO05D000936 4.7e-06 55.5 73 43.8
PGR031G3255 Punica granatum HOM05D001139 ORTHO05D000936 4.7e-06 55.5 65 49.2
TWI38G1383 Tripterygium wilfordii HOM05D001139 ORTHO05D000936 4.7e-06 55.5 66 45.5
Ciclev10009354m.g Citrus clementina HOM05D001139 ORTHO05D000936 6.1e-06 55.1 65 43.1
PSO541G6507 Papaver somniferum HOM05D001139 ORTHO05D000936 6.1e-06 55.1 68 48.5
PSO675G1528 Papaver somniferum HOM05D001139 ORTHO05D000936 6.1e-06 55.1 68 48.5
CANSAT56G3338 Cannabis sativa HOM05D001139 ORTHO05D000936 8.0e-06 54.7 64 42.2
CAN.G337.154 Capsicum annuum HOM05D001139 ORTHO05D000936 8.0e-06 54.7 78 39.7
ClCG10G005740 Citrullus lanatus HOM05D001139 ORTHO05D000936 8.0e-06 54.7 69 40.6


User provided reference genes

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