Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022194 Camellia sinensis var. sinensis HOM05D006706 ORTHO05D008794 2.1e-100 369.0 181 100.0
Rhsim07G0178100 Rhododendron simsii HOM05D006706 ORTHO05D008794 1.6e-63 246.5 146 78.8
vmacro05047 Vaccinium macrocarpon HOM05D006706 ORTHO05D008794 1.2e-60 236.9 162 72.8
Dinv26561 Davidia involucrata HOM05D006706 ORTHO05D008794 2.0e-58 229.6 167 73.1
Lj7C748T8 Lonicera japonica HOM05D006706 ORTHO05D008794 9.7e-58 227.3 184 65.2
HanXRQChr17g0538031 Helianthus annuus HOM05D006706 ORTHO05D008794 1.7e-57 226.5 160 70.0
Cfa013279 Carpinus fangiana HOM05D006706 ORTHO05D008794 3.7e-57 225.3 176 64.8
Potri.018G008000 Populus trichocarpa HOM05D006706 ORTHO05D008794 3.7e-57 225.3 120 89.2
Duzib187G1270 Durio zibethinus HOM05D006706 ORTHO05D008794 4.8e-57 224.9 131 80.9
QL12p025335 Quercus lobata HOM05D006706 ORTHO05D008794 6.3e-57 224.6 149 73.2
COL.COLO4_19024 Corchorus olitorius HOM05D006706 ORTHO05D008794 8.3e-57 224.2 161 69.6
Lsat_1_v5_gn_3_19441 Lactuca sativa HOM05D006706 ORTHO05D008794 8.3e-57 224.2 171 66.7
Actinidia22256 Actinidia chinensis HOM05D006706 ORTHO05D008794 1.1e-56 223.8 120 86.7
CANSAT78G2093 Cannabis sativa HOM05D006706 ORTHO05D008794 1.1e-56 223.8 130 82.3
Eucgr.C04010 Eucalyptus grandis HOM05D006706 ORTHO05D008794 1.1e-56 223.8 152 71.7
Prupe.1G459500 Prunus persica HOM05D006706 ORTHO05D008794 1.1e-56 223.8 140 80.0
Haze_21752 Corylus avellana HOM05D006706 ORTHO05D008794 1.8e-56 223.0 120 87.5
Gorai.010G122100 Gossypium raimondii HOM05D006706 ORTHO05D008794 1.8e-56 223.0 148 75.7
RcHm_v2.0_Chr1g0366021 Rosa chinensis HOM05D006706 ORTHO05D008794 3.1e-56 222.2 141 76.6
Haze_21755 Corylus avellana HOM05D006706 ORTHO05D008794 5.3e-56 221.5 176 64.8
Peaxi162Scf00459g00840 Petunia axillaris HOM05D006706 ORTHO05D008794 5.3e-56 221.5 163 70.6
ECA246G3311 Erigeron canadensis HOM05D006706 ORTHO05D008794 9.1e-56 220.7 134 76.1
Manes.03G004300 Manihot esculenta HOM05D006706 ORTHO05D008794 9.1e-56 220.7 179 64.8
Atru.chr7.2653 Acer truncatum HOM05D006706 ORTHO05D008794 1.2e-55 220.3 120 86.7
Cpa.g.sc23.24 Carica papaya HOM05D006706 ORTHO05D008794 1.2e-55 220.3 120 84.2
MD08G1127800 Malus domestica HOM05D006706 ORTHO05D008794 1.2e-55 220.3 139 79.1
Ca_15656_v3 Cicer arietinum L. HOM05D006706 ORTHO05D008794 1.6e-55 219.9 131 79.4
Ca_15664_v3 Cicer arietinum L. HOM05D006706 ORTHO05D008794 1.6e-55 219.9 131 79.4
DCAR_006314 Daucus carota HOM05D006706 ORTHO05D008794 1.6e-55 219.9 133 78.9
FAN27G0070 Fragaria x ananassa HOM05D006706 ORTHO05D008794 1.6e-55 219.9 143 74.1
Thecc.09G008100 Theobroma cacao HOM05D006706 ORTHO05D008794 1.6e-55 219.9 171 65.5
TWI34G0378 Tripterygium wilfordii HOM05D006706 ORTHO05D008794 2.7e-55 219.2 121 86.0
Sabra18G0015100 Salix brachista HOM05D006706 ORTHO05D008794 3.5e-55 218.8 120 86.7
FvH4_2g36680 Fragaria vesca HOM05D006706 ORTHO05D008794 4.5e-55 218.4 143 73.4
FAN20G0608 Fragaria x ananassa HOM05D006706 ORTHO05D008794 4.5e-55 218.4 143 73.4
PSO063G0792 Papaver somniferum HOM05D006706 ORTHO05D008794 4.5e-55 218.4 121 83.5
PSO170G0804 Papaver somniferum HOM05D006706 ORTHO05D008794 4.5e-55 218.4 121 83.5
CiPaw.08G020300 Carya illinoinensis HOM05D006706 ORTHO05D008794 5.9e-55 218.0 130 80.0
Ciclev10009845m.g Citrus clementina HOM05D006706 ORTHO05D008794 7.7e-55 217.6 118 88.1
VMungo1309G0608 Vigna mungo HOM05D006706 ORTHO05D008794 1.0e-54 217.2 118 84.7
arahy.Tifrunner.gnm1.ann1.92NGGW Arachis hypogaea HOM05D006706 ORTHO05D008794 1.3e-54 216.9 126 81.7
Lalb_Chr23g0269141 Lupinus albus HOM05D006706 ORTHO05D008794 1.3e-54 216.9 174 65.5
TPR.G12362 Trifolium pratense HOM05D006706 ORTHO05D008794 1.7e-54 216.5 171 66.1
Duzib168G0001 Durio zibethinus HOM05D006706 ORTHO05D008794 2.2e-54 216.1 142 75.4
arahy.Tifrunner.gnm1.ann1.G0PQAF Arachis hypogaea HOM05D006706 ORTHO05D008794 2.9e-54 215.7 126 81.0
Glyma.06G077100 Glycine max HOM05D006706 ORTHO05D008794 5.0e-54 214.9 118 84.7
Lj1g0012669 Lotus japonicus HOM05D006706 ORTHO05D008794 5.0e-54 214.9 131 79.4
RcHm_v2.0_Chr6g0305051 Rosa chinensis HOM05D006706 ORTHO05D008794 6.5e-54 214.5 141 75.2
Solyc12g096390.2 Solanum lycopersicum HOM05D006706 ORTHO05D008794 8.5e-54 214.2 118 85.6
Sopen12g032240 Solanum pennellii HOM05D006706 ORTHO05D008794 8.5e-54 214.2 118 85.6
THA.LOC104814973 Tarenaya hassleriana HOM05D006706 ORTHO05D008794 8.5e-54 214.2 136 75.7
GSVIVG01035513001 Vitis vinifera HOM05D006706 ORTHO05D008794 8.5e-54 214.2 159 67.9
Glyma.04G075900 Glycine max HOM05D006706 ORTHO05D008794 1.1e-53 213.8 118 84.7
Nitab4.5_0010092g0010 Nicotiana tabacum HOM05D006706 ORTHO05D008794 1.1e-53 213.8 118 85.6
SalBow4G1165 Salvia bowleyana HOM05D006706 ORTHO05D008794 1.1e-53 213.8 119 83.2
CsaV3_2G031370 Cucumis sativus L. HOM05D006706 ORTHO05D008794 2.5e-53 212.6 118 84.7
Aqoxy7G02908 Aquilegia oxysepala HOM05D006706 ORTHO05D008794 4.2e-53 211.8 119 84.0
PGSC0003DMG400029370 Solanum tuberosum HOM05D006706 ORTHO05D008794 4.2e-53 211.8 118 83.9
MBI14_g10732_MAGBIO Magnolia biondii HOM05D006706 ORTHO05D008794 5.5e-53 211.5 169 67.5
CAN.G566.65 Capsicum annuum HOM05D006706 ORTHO05D008794 9.4e-53 210.7 146 72.6
AUR62020287 Chenopodium quinoa HOM05D006706 ORTHO05D008794 9.4e-53 210.7 138 75.4
Nitab4.5_0001159g0140 Nicotiana tabacum HOM05D006706 ORTHO05D008794 9.4e-53 210.7 118 84.7
Medtr3g108900 Medicago truncatula HOM05D006706 ORTHO05D008794 1.2e-52 210.3 143 74.1
Migut.A00436 Erythranthe guttata HOM05D006706 ORTHO05D008794 1.6e-52 209.9 167 64.1
Psat0s1809g0040 Pisum sativum HOM05D006706 ORTHO05D008794 1.6e-52 209.9 131 77.1
Nn3g19671 Nelumbo nucifera HOM05D006706 ORTHO05D008794 2.1e-52 209.5 178 60.7
CiPaw.07G211900 Carya illinoinensis HOM05D006706 ORTHO05D008794 3.6e-52 208.8 117 84.6
Hund07113 Selenicereus undatus HOM05D006706 ORTHO05D008794 3.6e-52 208.8 118 82.2
BcaC04g19291 Brassica carinata HOM05D006706 ORTHO05D008794 6.1e-52 208.0 119 81.5
Sed0007748 Sechium edule HOM05D006706 ORTHO05D008794 6.1e-52 208.0 118 84.7
MELO3C011186.2 Cucumis melo HOM05D006706 ORTHO05D008794 8.0e-52 207.6 174 64.9
Oeu018568.1 Olea europaea HOM05D006706 ORTHO05D008794 8.0e-52 207.6 158 68.4
Phvul.009G101700 Phaseolus vulgaris HOM05D006706 ORTHO05D008794 8.0e-52 207.6 167 62.9
PGR044G2738 Punica granatum HOM05D006706 ORTHO05D008794 8.0e-52 207.6 161 65.2
AT5G10700 Arabidopsis thaliana HOM05D006706 ORTHO05D008794 1.0e-51 207.2 129 75.2
CARHR202620 Cardamine hirsuta HOM05D006706 ORTHO05D008794 1.4e-51 206.8 158 67.1
AL6G21240 Arabidopsis lyrata HOM05D006706 ORTHO05D008794 1.8e-51 206.5 119 80.7
Thhalv10014763m.g Eutrema salsugineum HOM05D006706 ORTHO05D008794 4.0e-51 205.3 121 79.3
Sp6g32760 Schrenkiella parvula HOM05D006706 ORTHO05D008794 4.0e-51 205.3 119 79.8
CDE02G4751 Ceratophyllum demersum HOM05D006706 ORTHO05D008794 5.2e-51 204.9 120 80.8
Carub.0006s0917 Capsella rubella HOM05D006706 ORTHO05D008794 6.8e-51 204.5 135 73.3
BcaB01g06271 Brassica carinata HOM05D006706 ORTHO05D008794 8.8e-51 204.1 157 63.7
A03p04700 Brassica napus HOM05D006706 ORTHO05D008794 8.8e-51 204.1 158 65.2
MSTRG.25780 Avicennia marina HOM05D006706 ORTHO05D008794 1.2e-50 203.8 133 76.7
BcaB01g05507 Brassica carinata HOM05D006706 ORTHO05D008794 1.2e-50 203.8 119 79.0
C03p05410 Brassica napus HOM05D006706 ORTHO05D008794 1.2e-50 203.8 119 79.0
BraA03t09810Z Brassica rapa HOM05D006706 ORTHO05D008794 1.2e-50 203.8 146 69.2
Zm00001eb071580 Zea mays HOM05D006706 ORTHO05D008794 3.4e-50 202.2 184 59.2
Aa31LG3G16430 Aethionema arabicum HOM05D006706 ORTHO05D008794 2.2e-49 199.5 131 72.5
ATR0580G320 Amborella trichopoda HOM05D006706 ORTHO05D008794 2.8e-49 199.1 124 78.2
SEGI_18071 Sequoiadendron giganteum HOM05D006706 ORTHO05D008794 2.4e-48 196.1 120 73.3
HPP92_021967 Vanilla planifolia HOM05D006706 ORTHO05D008794 5.9e-47 191.4 138 70.3
Os04g0605200 Oryza sativa ssp. japonica HOM05D006706 ORTHO05D008794 1.0e-46 190.7 120 71.7
HPP92_021941 Vanilla planifolia HOM05D006706 ORTHO05D008794 1.7e-46 189.9 143 67.8
AUR62037716 Chenopodium quinoa HOM05D006706 ORTHO05D008794 5.0e-46 188.3 125 73.6
Pp3c18_3890 Physcomitrium patens HOM05D006706 ORTHO05D008794 4.2e-45 185.3 149 57.0
SGA_v2.0_scaffold193G40663 Striga asiatica HOM05D006706 ORTHO05D008794 2.8e-44 182.6 196 54.1
AagrBONN_evm.TU.Sc2ySwM_228.645 Anthoceros agrestis HOM05D000036 ORTHO05D038461 3.6e-44 182.2 131 66.4
SMO203G0167 Selaginella moellendorffii HOM05D006706 ORTHO05D008794 8.9e-43 177.6 121 66.9
ClCG08G012660 Citrullus lanatus HOM05D006706 ORTHO05D008794 8.3e-41 171.0 167 56.9
Mapoly0013s0161 Marchantia polymorpha HOM05D006706 ORTHO05D008794 8.3e-41 171.0 139 60.4
MD15G1107200 Malus domestica HOM05D006706 ORTHO05D008794 9.2e-40 167.5 151 62.3
Ah.10g024780 Amaranthus hybridus HOM05D006706 ORTHO05D008794 1.1e-37 160.6 99 75.8
unitig_21.g20325 Utricularia gibba HOM05D006706 ORTHO05D008794 3.6e-36 155.6 157 49.0
Cre10.g449350 Chlamydomonas reinhardtii HOM05D006706 ORTHO05D008794 1.5e-34 150.2 138 55.1
MCO07G367 Micromonas commoda HOM05D006706 ORTHO05D008794 2.9e-33 146.0 129 55.0
CBR_g3167 Chara braunii HOM05D006706 ORTHO05D008794 1.9e-32 143.3 158 48.1
Gohir.A06G105300 Gossypium hirsutum HOM05D006706 ORTHO05D008794 1.9e-24 116.7 87 66.7
Gohir.D06G107400 Gossypium hirsutum HOM05D006706 ORTHO05D008794 2.4e-24 116.3 87 66.7
TAR636G3689 Trochodendron aralioides HOM05D006706 ORTHO05D008794 7.0e-24 114.8 70 77.1
Sc06g0000170 Simmondsia chinensis HOM05D006706 ORTHO05D008794 1.2e-23 114.0 59 84.7
EL10Ac2g02413 Beta vulgaris HOM05D006706 ORTHO05D008794 4.3e-21 105.5 61 82.0
Haze_27087 Corylus avellana HOM05D006706 ORTHO05D008794 3.6e-20 102.4 116 45.7
PRCOL_00004161 Prasinoderma coloniale HOM05D006706 ORTHO05D008794 4.7e-20 102.1 133 46.6
CDE06G2578 Ceratophyllum demersum HOM05D006706 ORTHO05D008794 1.4e-16 90.5 62 64.5
A10p26910 Brassica napus HOM05D006706 ORTHO05D028018 2.6e-10 69.7 51 66.7
Sed0005624 Sechium edule HOM05D006706 ORTHO05D373521 6.0e-07 58.5 58 50.0


User provided reference genes

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