Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022186 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 6.1e-166 587.4 298 100.0
CSS0032415 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 7.2e-159 563.9 314 93.9
CSS0027146 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 4.3e-151 538.1 326 88.7
CSS0010878 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 7.9e-97 357.8 305 65.2
CSS0003791 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 4.3e-95 352.1 316 64.9
CSS0029307 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 2.0e-92 343.2 300 66.0
CSS0003795 Camellia sinensis var. sinensis HOM05D000125 ORTHO05D010101 9.4e-58 228.0 302 48.3
CSS0030731 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 1.6e-57 227.3 308 47.7
CSS0042755 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 3.7e-54 216.1 301 46.5
CSS0047661 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 2.6e-39 166.8 226 45.6
CSS0034581 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 1.6e-36 157.5 232 42.7
CSS0025888 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 2.3e-32 143.7 287 36.9
CSS0031884 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 3.2e-29 133.3 243 38.3
Haze_00406 Corylus avellana HOM05D000125 ORTHO05D010101 1.9e-21 107.5 104 51.0
Cfa013571 Carpinus fangiana HOM05D000125 ORTHO05D010101 5.4e-21 105.9 143 40.6
QL09p028133 Quercus lobata HOM05D009378 ORTHO05D010101 3.5e-20 103.2 180 34.4
Haze_19953 Corylus avellana HOM05D009378 ORTHO05D010101 1.7e-19 100.9 108 47.2
Haze_00404 Corylus avellana HOM05D000125 ORTHO05D010101 2.3e-19 100.5 111 45.9
Haze_00427 Corylus avellana HOM05D000125 ORTHO05D010101 1.1e-18 98.2 98 50.0
Cfa016027 Carpinus fangiana HOM05D009378 ORTHO05D010101 1.9e-18 97.4 136 42.6
QL09p024465 Quercus lobata HOM05D000125 ORTHO05D010101 3.3e-18 96.7 189 35.4
TWI81G0642 Tripterygium wilfordii HOM05D000125 ORTHO05D010101 1.6e-17 94.4 133 36.8
Cfa016029 Carpinus fangiana HOM05D009378 ORTHO05D010101 2.1e-17 94.0 138 41.3
QL09p024013 Quercus lobata HOM05D008014 ORTHO05D010101 3.6e-17 93.2 145 36.6
Actinidia13804 Actinidia chinensis HOM05D000125 ORTHO05D030879 6.2e-17 92.4 156 34.6
QL02p073603 Quercus lobata HOM05D000125 ORTHO05D010101 6.2e-17 92.4 111 45.9
Cfa016030 Carpinus fangiana HOM05D000125 ORTHO05D010101 1.1e-16 91.7 137 39.4
CiPaw.06G031800 Carya illinoinensis HOM05D000125 ORTHO05D010101 1.4e-16 91.3 100 47.0
QL09p024439 Quercus lobata HOM05D009378 ORTHO05D010101 1.4e-16 91.3 192 32.8
QL09p024149 Quercus lobata HOM05D009378 ORTHO05D010101 3.1e-16 90.1 185 34.1
QL93p0209_0042 Quercus lobata HOM05D009378 ORTHO05D010101 3.1e-16 90.1 185 34.1
Haze_00511 Corylus avellana HOM05D009378 ORTHO05D010101 4.0e-16 89.7 100 47.0
Actinidia13806 Actinidia chinensis HOM05D000125 ORTHO05D030879 1.2e-15 88.2 130 37.7
Cfa016894 Carpinus fangiana HOM05D000125 ORTHO05D010101 1.5e-15 87.8 173 34.7
QL09p024027 Quercus lobata HOM05D009378 ORTHO05D010101 1.5e-15 87.8 135 39.3
QL05p062837 Quercus lobata HOM05D009378 ORTHO05D010101 5.8e-15 85.9 186 36.0
Actinidia02169 Actinidia chinensis HOM05D000125 ORTHO05D030879 7.5e-15 85.5 143 33.6
Haze_14777 Corylus avellana HOM05D000125 ORTHO05D010101 7.5e-15 85.5 102 46.1
QL09p024175 Quercus lobata HOM05D009378 ORTHO05D010101 7.5e-15 85.5 141 38.3
Cpa.g.sc623.3 Carica papaya HOM05D009378 ORTHO05D010101 9.8e-15 85.1 181 31.5
Cfa016031 Carpinus fangiana HOM05D000125 ORTHO05D010101 1.3e-14 84.7 99 46.5
QL04p029513 Quercus lobata HOM05D000125 ORTHO05D000120 1.3e-14 84.7 179 33.5
QL04p029700 Quercus lobata HOM05D020596 ORTHO05D010101 1.3e-14 84.7 143 33.6
QL04p029779 Quercus lobata HOM05D020596 ORTHO05D010101 1.3e-14 84.7 99 43.4
QL93p0209_0016 Quercus lobata HOM05D009378 ORTHO05D010101 1.7e-14 84.3 141 37.6
Cfa007320 Carpinus fangiana HOM05D000125 ORTHO05D010101 2.2e-14 84.0 102 43.1
QL04p029580 Quercus lobata HOM05D000125 ORTHO05D000120 2.2e-14 84.0 99 42.4
QL04p029877 Quercus lobata HOM05D020596 ORTHO05D010101 2.2e-14 84.0 99 42.4
Eucgr.E00385 Eucalyptus grandis HOM05D000125 ORTHO05D010101 6.4e-14 82.4 104 35.6
QL05p044270 Quercus lobata HOM05D000125 ORTHO05D007874 1.2e-12 78.2 217 30.0
Rhsim13G0216300 Rhododendron simsii HOM05D000448 ORTHO05D000291 2.1e-12 77.4 277 28.9
Haze_13413 Corylus avellana HOM05D000125 ORTHO05D010101 2.7e-12 77.0 216 31.9
Sed0024411 Sechium edule HOM05D024292 ORTHO05D010101 2.7e-12 77.0 301 24.9
Ciclev10014060m.g Citrus clementina HOM05D000125 ORTHO05D000120 3.5e-12 76.6 238 27.3
PGR031G1316 Punica granatum HOM05D000125 ORTHO05D010101 3.5e-12 76.6 201 25.9
PGR042G0442 Punica granatum HOM05D000125 ORTHO05D000807 4.6e-12 76.3 153 34.6
QL04p029334 Quercus lobata HOM05D020596 ORTHO05D010101 7.8e-12 75.5 105 39.0
Cpa.g.sc623.1 Carica papaya HOM05D009378 ORTHO05D010101 3.0e-11 73.6 101 41.6
PGR102G3309 Punica granatum HOM05D000125 ORTHO05D010101 1.1e-10 71.6 195 30.8
ClCG01G004320 Citrullus lanatus HOM05D024292 ORTHO05D010101 3.3e-10 70.1 205 28.8
Eucgr.E00393 Eucalyptus grandis HOM05D000125 ORTHO05D000120 3.3e-10 70.1 105 37.1
CANSAT21G1400 Cannabis sativa HOM05D000125 ORTHO05D010101 7.3e-10 68.9 105 34.3
Ciclev10027597m.g Citrus clementina HOM05D000125 ORTHO05D000120 7.3e-10 68.9 121 28.9
Eucgr.E00390 Eucalyptus grandis HOM05D009378 ORTHO05D010101 1.2e-09 68.2 105 33.3
PGR042G3408 Punica granatum HOM05D000125 ORTHO05D000120 3.6e-09 66.6 178 27.5
PGR044G2047 Punica granatum HOM05D009378 ORTHO05D010101 3.6e-09 66.6 101 38.6
ClCG01G004310 Citrullus lanatus HOM05D024292 ORTHO05D010101 6.2e-09 65.9 209 26.8
MELO3C005509.2 Cucumis melo HOM05D024292 ORTHO05D010101 6.2e-09 65.9 209 25.4
Ciclev10027164m.g Citrus clementina HOM05D000125 ORTHO05D000120 1.8e-08 64.3 105 28.6
CANSAT21G1703 Cannabis sativa HOM05D000125 ORTHO05D000120 3.1e-08 63.5 114 32.5
PGR031G1223 Punica granatum HOM05D009378 ORTHO05D010101 5.2e-08 62.8 133 30.1
CsaV3_5G004510 Cucumis sativus L. HOM05D024292 ORTHO05D010101 8.9e-08 62.0 209 24.4
Haze_00401 Corylus avellana HOM05D009378 ORTHO05D010101 1.2e-07 61.6 49 61.2
CANSAT11G0593 Cannabis sativa HOM05D000125 ORTHO05D010101 2.9e-06 57.0 189 27.0
Dinv20791 Davidia involucrata HOM05D000699 ORTHO05D000519 6.4e-06 55.8 126 29.4


User provided reference genes

Program Settings