Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022179 Camellia sinensis var. sinensis HOM05D010878 ORTHO05D009673 1.1e-93 346.7 184 100.0
CSS0014543 Camellia sinensis var. sinensis HOM05D000097 ORTHO05D009673 1.1e-85 320.1 176 96.6
CSS0031156 Camellia sinensis var. sinensis HOM05D010878 ORTHO05D009673 7.1e-64 247.7 182 72.5
Cc11_g05990 Coffea canephora HOM05D000097 ORTHO05D009673 2.9e-33 146.0 156 50.6
Cc11_g06180 Coffea canephora HOM05D000097 ORTHO05D009673 1.1e-32 144.1 156 49.4
Cc07_g18350 Coffea canephora HOM05D000097 ORTHO05D009673 4.6e-31 138.7 156 48.7
Cc11_g06000 Coffea canephora HOM05D010878 ORTHO05D009673 6.1e-31 138.3 156 57.1
CSS0048371 Camellia sinensis var. sinensis HOM05D010878 ORTHO05D009673 1.8e-30 136.7 164 43.9
Rhsim10G0154500 Rhododendron simsii HOM05D010878 ORTHO05D009673 8.2e-28 127.9 167 46.1
Actinidia38166 Actinidia chinensis HOM05D000097 ORTHO05D009673 1.4e-27 127.1 164 42.7
CSS0026496 Camellia sinensis var. sinensis HOM05D000097 ORTHO05D009673 1.5e-26 123.6 164 43.9
RhsimUnG0219000 Rhododendron simsii HOM05D010878 ORTHO05D009673 1.5e-26 123.6 172 45.3
Rhsim04G0081700 Rhododendron simsii HOM05D000149 ORTHO05D009673 2.0e-26 123.2 157 45.9
vmacro09222 Vaccinium macrocarpon HOM05D000097 ORTHO05D009673 2.6e-26 122.9 156 43.6
CSS0048318 Camellia sinensis var. sinensis HOM05D000097 ORTHO05D009673 5.9e-26 121.7 164 51.2
Actinidia38167 Actinidia chinensis HOM05D010878 ORTHO05D009673 9.4e-24 114.4 160 40.6
Rhsim05G0188900 Rhododendron simsii HOM05D000097 ORTHO05D009673 2.3e-22 109.8 170 38.2
Rhsim06G0042700 Rhododendron simsii HOM05D010878 ORTHO05D009673 5.1e-22 108.6 170 40.6
Solyc09g098050.2 Solanum lycopersicum HOM05D000097 ORTHO05D009673 6.7e-22 108.2 104 56.7
CAN.G84.45 Capsicum annuum HOM05D010878 ORTHO05D009673 4.8e-20 102.1 157 40.1
Rhsim06G0042400 Rhododendron simsii HOM05D010878 ORTHO05D009673 8.2e-20 101.3 169 47.3
DCAR_001312 Daucus carota HOM05D000097 ORTHO05D009673 1.4e-19 100.5 156 38.5
Sopen09g035970 Solanum pennellii HOM05D000097 ORTHO05D009673 1.4e-19 100.5 100 57.0
Rhsim06G0042600 Rhododendron simsii HOM05D010878 ORTHO05D009673 2.4e-19 99.8 169 47.3
CSS0032671 Camellia sinensis var. sinensis HOM05D000097 ORTHO05D009673 4.1e-19 99.0 136 47.8
Nitab4.5_0000533g0020 Nicotiana tabacum HOM05D000097 ORTHO05D009673 6.9e-19 98.2 152 48.0
Peaxi162Scf00312g00612 Petunia axillaris HOM05D000097 ORTHO05D009673 2.0e-18 96.7 125 42.4
Nitab4.5_0000888g0040 Nicotiana tabacum HOM05D000097 ORTHO05D009673 3.4e-18 95.9 156 45.5
CAN.G799.9 Capsicum annuum HOM05D000264 ORTHO05D009673 1.0e-17 94.4 126 40.5
Peaxi162Scf00389g00031 Petunia axillaris HOM05D000097 ORTHO05D009673 1.0e-17 94.4 169 45.0
DCAR_001308 Daucus carota HOM05D000097 ORTHO05D009673 1.3e-17 94.0 188 31.4
Solyc09g098060.3 Solanum lycopersicum HOM05D000097 ORTHO05D009673 2.9e-17 92.8 103 49.5
Sopen09g035980 Solanum pennellii HOM05D000097 ORTHO05D009673 3.8e-17 92.4 103 49.5
TAR636G0231 Trochodendron aralioides HOM05D000222 ORTHO05D009673 8.5e-17 91.3 133 41.4
Rhsim05G0189100 Rhododendron simsii HOM05D000097 ORTHO05D009673 1.4e-16 90.5 163 34.4
Rhsim06G0042900 Rhododendron simsii HOM05D010878 ORTHO05D009673 1.4e-16 90.5 171 41.5
Actinidia26770 Actinidia chinensis HOM05D010878 ORTHO05D009673 1.9e-16 90.1 111 44.1
Nitab4.5_0012294g0050 Nicotiana tabacum HOM05D010878 ORTHO05D009673 4.2e-16 89.0 91 54.9
Rhsim06G0043500 Rhododendron simsii HOM05D010878 ORTHO05D009673 4.2e-16 89.0 200 39.0
DCAR_006030 Daucus carota HOM05D000097 ORTHO05D009673 1.6e-15 87.0 189 31.7
Rhsim06G0043800 Rhododendron simsii HOM05D000097 ORTHO05D009673 2.1e-15 86.7 196 34.7
TAR636G0647 Trochodendron aralioides HOM05D000097 ORTHO05D009673 3.6e-15 85.9 91 47.3
Nitab4.5_0001693g0050 Nicotiana tabacum HOM05D010878 ORTHO05D009673 1.8e-14 83.6 107 46.7
TAR636G0150 Trochodendron aralioides HOM05D000097 ORTHO05D009673 1.3e-12 77.4 165 31.5
TAR636G2268 Trochodendron aralioides HOM05D000097 ORTHO05D009673 1.3e-09 67.4 126 34.9
DCAR_001310 Daucus carota HOM05D002397 ORTHO05D009673 2.2e-09 66.6 192 27.6
ATR0049G043 Amborella trichopoda HOM05D000097 ORTHO05D000041 5.0e-09 65.5 163 28.8
Rhsim06G0044000 Rhododendron simsii HOM05D010878 ORTHO05D009673 1.9e-08 63.5 130 32.3
Haze_06874 Corylus avellana HOM05D000097 ORTHO05D000041 6.1e-07 58.5 158 35.4
ATR0049G029 Amborella trichopoda HOM05D000097 ORTHO05D000041 2.3e-06 56.6 132 30.3
MBI04_g26262_MAGBIO Magnolia biondii HOM05D000097 ORTHO05D000041 2.3e-06 56.6 132 30.3
Prupe.1G007700 Prunus persica HOM05D000097 ORTHO05D000041 5.2e-06 55.5 128 32.8
CAN.G681.27 Capsicum annuum HOM05D010878 ORTHO05D009673 6.7e-06 55.1 49 63.3
Cfa000149 Carpinus fangiana HOM05D000097 ORTHO05D000041 6.7e-06 55.1 169 27.8
PGSC0003DMG400023040 Solanum tuberosum HOM05D000097 ORTHO05D000041 8.8e-06 54.7 147 27.9


User provided reference genes

Program Settings