Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022125 Camellia sinensis var. sinensis HOM05D025536 ORTHO05D010877 4.4e-194 681.0 322 100.0
CSS0005117 Camellia sinensis var. sinensis HOM05D025536 ORTHO05D010877 4.2e-189 664.5 322 98.4
CSS0046102 Camellia sinensis var. sinensis HOM05D025536 ORTHO05D010877 1.4e-179 632.9 322 92.9
CSS0041687 Camellia sinensis var. sinensis HOM05D025536 ORTHO05D010877 1.1e-109 400.6 322 64.3
Rhsim04G0202700 Rhododendron simsii HOM05D025536 ORTHO05D010877 8.9e-46 188.3 307 37.5
CSS0019383 Camellia sinensis var. sinensis HOM05D025100 ORTHO05D013046 4.6e-26 122.9 293 33.8
CSS0026782 Camellia sinensis var. sinensis HOM05D025100 ORTHO05D013046 4.6e-26 122.9 267 34.1
CSS0012725 Camellia sinensis var. sinensis HOM05D025100 ORTHO05D013046 2.3e-25 120.6 289 33.6
Rhsim12G0126200 Rhododendron simsii HOM05D010628 ORTHO05D010877 2.4e-22 110.5 239 33.9
Dinv33461 Davidia involucrata HOM05D010628 ORTHO05D010877 1.2e-21 108.2 262 32.1
CSS0033575 Camellia sinensis var. sinensis HOM05D013111 ORTHO05D010877 1.5e-21 107.8 319 28.2
Dinv34884 Davidia involucrata HOM05D010628 ORTHO05D010877 2.4e-19 100.5 197 33.5
CSS0001088 Camellia sinensis var. sinensis HOM05D012885 ORTHO05D010877 7.9e-18 95.5 223 28.3
Dinv35632 Davidia involucrata HOM05D013363 ORTHO05D015094 1.0e-17 95.1 310 26.8
QL02p073240 Quercus lobata HOM05D025100 ORTHO05D010877 9.6e-16 88.6 258 28.7
Dinv35477 Davidia involucrata HOM05D013363 ORTHO05D015094 2.8e-15 87.0 307 25.4
Rhsim07G0232000 Rhododendron simsii HOM05D010628 ORTHO05D010877 4.8e-15 86.3 207 31.4
COL.COLO4_31368 Corchorus olitorius HOM05D017380 ORTHO05D019049 1.1e-14 85.1 237 29.1
vmacro21156 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 1.8e-14 84.3 202 29.7
CSS0029553 Camellia sinensis var. sinensis HOM05D013111 ORTHO05D013046 4.0e-14 83.2 244 25.8
Rhsim10G0205100 Rhododendron simsii HOM05D012885 ORTHO05D010877 4.0e-14 83.2 205 29.3
Dinv35658 Davidia involucrata HOM05D013363 ORTHO05D015094 1.2e-13 81.6 234 28.6
QL11p054840 Quercus lobata HOM05D000002 ORTHO05D000001 1.2e-13 81.6 237 25.7
QL11p056498 Quercus lobata HOM05D010066 ORTHO05D009743 1.2e-13 81.6 279 27.6
RhsimUnG0033600 Rhododendron simsii HOM05D010628 ORTHO05D010877 2.0e-13 80.9 190 32.1
Dinv35631 Davidia involucrata HOM05D013363 ORTHO05D015094 2.6e-13 80.5 251 30.3
Haze_15512 Corylus avellana HOM05D000163 ORTHO05D000962 4.5e-13 79.7 255 25.9
Haze_02251 Corylus avellana HOM05D000722 ORTHO05D000590 7.6e-13 79.0 280 27.9
QL05p053761 Quercus lobata HOM05D010066 ORTHO05D016816 1.0e-12 78.6 300 24.3
CSS0015882 Camellia sinensis var. sinensis HOM05D012885 ORTHO05D010877 1.7e-12 77.8 234 28.2
Haze_02253 Corylus avellana HOM05D001291 ORTHO05D009743 2.2e-12 77.4 275 28.4
Haze_02263 Corylus avellana HOM05D008391 ORTHO05D009743 2.2e-12 77.4 275 28.4
Cfa003918 Carpinus fangiana HOM05D008391 ORTHO05D009743 6.5e-12 75.9 198 27.8
RhsimUnG0033800 Rhododendron simsii HOM05D010628 ORTHO05D010877 8.4e-12 75.5 205 30.7
COL.COLO4_05074 Corchorus olitorius HOM05D009781 ORTHO05D011819 1.1e-11 75.1 241 30.7
Gohir.D06G025700 Gossypium hirsutum HOM05D009781 ORTHO05D011819 1.9e-11 74.3 241 28.2
Rhsim10G0205000 Rhododendron simsii HOM05D012885 ORTHO05D010877 4.2e-11 73.2 250 26.4
Cfa003917 Carpinus fangiana HOM05D008391 ORTHO05D009743 7.1e-11 72.4 203 26.6
Gohir.D06G026000 Gossypium hirsutum HOM05D009781 ORTHO05D011819 7.1e-11 72.4 241 28.6
QL11p033269 Quercus lobata HOM05D010066 ORTHO05D009743 7.1e-11 72.4 275 26.9
Haze_02265 Corylus avellana HOM05D008391 ORTHO05D009743 9.3e-11 72.0 186 30.1
Rhsim10G0208800 Rhododendron simsii HOM05D012885 ORTHO05D010877 1.2e-10 71.6 202 28.7
Hund00487 Selenicereus undatus HOM05D064078 ORTHO05D012831 1.2e-10 71.6 196 29.6
Rhsim07G0232100 Rhododendron simsii HOM05D010628 ORTHO05D010877 1.6e-10 71.2 239 28.0
Cfa019001 Carpinus fangiana HOM05D008391 ORTHO05D009743 2.1e-10 70.9 244 28.7
Dinv35654 Davidia involucrata HOM05D013363 ORTHO05D015094 2.1e-10 70.9 284 26.4
RhsimUnG0034900 Rhododendron simsii HOM05D010628 ORTHO05D010877 2.7e-10 70.5 193 30.6
Rhsim05G0013500 Rhododendron simsii HOM05D012885 ORTHO05D010877 3.5e-10 70.1 270 30.0
RhsimUnG0034600 Rhododendron simsii HOM05D010628 ORTHO05D010877 3.5e-10 70.1 193 30.6
RhsimUnG0034700 Rhododendron simsii HOM05D010628 ORTHO05D010877 3.5e-10 70.1 193 30.6
RhsimUnG0034800 Rhododendron simsii HOM05D010628 ORTHO05D010877 3.5e-10 70.1 193 30.6
vmacro21157 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 4.6e-10 69.7 169 31.4
RhsimUnG0034500 Rhododendron simsii HOM05D010628 ORTHO05D010877 7.9e-10 68.9 193 30.6
Rhsim05G0014400 Rhododendron simsii HOM05D012885 ORTHO05D010877 1.3e-09 68.2 285 29.1
Cfa003300 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.8e-09 67.8 242 31.0
Rhsim10G0208600 Rhododendron simsii HOM05D012885 ORTHO05D010877 1.8e-09 67.8 202 27.7
COL.COLO4_09953 Corchorus olitorius HOM05D017380 ORTHO05D019049 3.0e-09 67.0 193 29.0
Gohir.A06G029200 Gossypium hirsutum HOM05D009781 ORTHO05D011819 3.0e-09 67.0 237 28.3
Gohir.D06G028300 Gossypium hirsutum HOM05D009781 ORTHO05D011819 6.7e-09 65.9 252 27.8
Haze_02259 Corylus avellana HOM05D000722 ORTHO05D000590 8.7e-09 65.5 271 25.1
DCAR_024801 Daucus carota HOM05D062669 ORTHO05D045068 8.7e-09 65.5 237 25.3
COL.COLO4_09593 Corchorus olitorius HOM05D014846 ORTHO05D016249 1.5e-08 64.7 212 29.2
Haze_02255 Corylus avellana HOM05D008391 ORTHO05D009743 2.5e-08 63.9 238 25.6
Haze_14978 Corylus avellana HOM05D008391 ORTHO05D009743 1.3e-07 61.6 240 27.5
TWI74G1430 Tripterygium wilfordii HOM05D000249 ORTHO05D000206 1.6e-07 61.2 161 28.6
Haze_14914 Corylus avellana HOM05D008391 ORTHO05D009743 2.8e-07 60.5 274 25.9
Thecc.07G157200 Theobroma cacao HOM05D009781 ORTHO05D011819 4.8e-07 59.7 208 29.3
SGA_v2.0_scaffold130G34356 Striga asiatica HOM05D017380 ORTHO05D019049 1.1e-06 58.5 183 29.0
AUR62016279 Chenopodium quinoa HOM05D000249 ORTHO05D000206 1.4e-06 58.2 162 27.8
COL.COLO4_09850 Corchorus olitorius HOM05D014846 ORTHO05D016249 1.4e-06 58.2 198 26.3
Dinv25049 Davidia involucrata HOM05D011324 ORTHO05D013448 2.4e-06 57.4 88 39.8
QL11p055703 Quercus lobata HOM05D033527 ORTHO05D009743 2.4e-06 57.4 101 33.7
COL.COLO4_09561 Corchorus olitorius HOM05D014846 ORTHO05D016249 3.1e-06 57.0 200 28.5
Aqoxy2G03550 Aquilegia oxysepala HOM05D013671 ORTHO05D010877 4.1e-06 56.6 136 30.9
QL11p055392 Quercus lobata HOM05D010066 ORTHO05D009743 5.3e-06 56.2 96 34.4
CSS0013471 Camellia sinensis var. sinensis HOM05D000249 ORTHO05D000206 6.9e-06 55.8 194 26.8
CSS0028906 Camellia sinensis var. sinensis HOM05D000249 ORTHO05D000206 9.0e-06 55.5 194 26.3


User provided reference genes

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