Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022105 Camellia sinensis var. sinensis HOM05D005659 ORTHO05D007059 2.3e-81 305.4 151 100.0
CSS0045008 Camellia sinensis var. sinensis HOM05D005659 ORTHO05D007059 1.3e-71 273.1 151 90.7
Hma1.2p1_2164F.1_g315750 Hydrangea macrophylla HOM05D005659 ORTHO05D007059 2.4e-65 252.3 151 81.5
GSVIVG01036077001 Vitis vinifera HOM05D005659 ORTHO05D007059 1.1e-62 243.4 151 81.5
Cc01_g08780 Coffea canephora HOM05D005659 ORTHO05D007059 1.9e-62 242.7 150 80.7
Haze_23342 Corylus avellana HOM05D005659 ORTHO05D007059 1.0e-60 236.9 151 78.8
MSTRG.18774 Avicennia marina HOM05D005659 ORTHO05D007059 1.3e-60 236.5 144 80.6
Nitab4.5_0006903g0010 Nicotiana tabacum HOM05D005659 ORTHO05D007059 1.3e-60 236.5 151 80.1
Oeu002356.1 Olea europaea HOM05D005659 ORTHO05D007059 1.3e-60 236.5 151 78.8
SalBow6G0820 Salvia bowleyana HOM05D005659 ORTHO05D007059 1.3e-60 236.5 150 80.0
Cfa009983 Carpinus fangiana HOM05D005659 ORTHO05D007059 3.0e-60 235.3 151 78.1
Peaxi162Scf00091g00713 Petunia axillaris HOM05D005659 ORTHO05D007059 2.8e-58 228.8 150 76.0
Solyc06g074200.4 Solanum lycopersicum HOM05D005659 ORTHO05D007059 3.6e-58 228.4 146 76.7
Sopen06g030620 Solanum pennellii HOM05D005659 ORTHO05D007059 3.6e-58 228.4 146 76.7
CAN.G919.41 Capsicum annuum HOM05D005659 ORTHO05D007059 8.1e-58 227.3 150 76.7
Cpa.g.sc195.32 Carica papaya HOM05D005659 ORTHO05D007059 1.4e-57 226.5 151 74.8
PGSC0003DMG400005890 Solanum tuberosum HOM05D005659 ORTHO05D007059 1.4e-57 226.5 146 76.0
HanXRQChr04g0128561 Helianthus annuus HOM05D005659 ORTHO05D007059 1.8e-57 226.1 146 74.7
DCAR_012226 Daucus carota HOM05D005659 ORTHO05D007059 2.4e-57 225.7 148 74.3
CiPaw.14G097600 Carya illinoinensis HOM05D005659 ORTHO05D007059 3.1e-57 225.3 152 75.0
TWI75G1160 Tripterygium wilfordii HOM05D005659 ORTHO05D007059 4.0e-57 224.9 152 75.0
Ciclev10029515m.g Citrus clementina HOM05D005659 ORTHO05D007059 6.9e-57 224.2 150 74.0
Sabra04G0134500 Salix brachista HOM05D005659 ORTHO05D007059 9.0e-57 223.8 150 73.3
Potri.004G199400 Populus trichocarpa HOM05D005659 ORTHO05D007059 1.2e-56 223.4 150 74.0
Sc12g0004680 Simmondsia chinensis HOM05D005659 ORTHO05D007059 2.0e-56 222.6 151 73.5
EL10Ac4g08175 Beta vulgaris HOM05D005659 ORTHO05D007059 2.6e-56 222.2 152 77.0
Manes.04G000900 Manihot esculenta HOM05D005659 ORTHO05D007059 2.6e-56 222.2 152 73.0
Actinidia37070 Actinidia chinensis HOM05D005659 ORTHO05D007059 3.4e-56 221.9 148 75.0
CANSAT54G0546 Cannabis sativa HOM05D005659 ORTHO05D007059 5.8e-56 221.1 151 74.2
Potri.009G160800 Populus trichocarpa HOM05D005659 ORTHO05D007059 7.6e-56 220.7 151 72.8
Sabra09G0125800 Salix brachista HOM05D005659 ORTHO05D007059 9.9e-56 220.3 151 71.5
ECA236G2734 Erigeron canadensis HOM05D005659 ORTHO05D007059 1.3e-55 219.9 147 74.8
Eucgr.B03824 Eucalyptus grandis HOM05D005659 ORTHO05D007059 2.9e-55 218.8 151 70.9
MBI17_g28186_MAGBIO Magnolia biondii HOM05D005659 ORTHO05D007059 3.8e-55 218.4 140 75.0
Dinv22811 Davidia involucrata HOM05D005659 ORTHO05D007059 6.4e-55 217.6 120 80.0
Atru.chr3.3161 Acer truncatum HOM05D005659 ORTHO05D007059 8.4e-55 217.2 151 72.2
PGR102G0055 Punica granatum HOM05D005659 ORTHO05D007059 1.4e-54 216.5 151 72.2
Aa31sc785G10 Aethionema arabicum HOM05D005659 ORTHO05D007059 2.4e-54 215.7 151 70.9
BolC8t52533H Brassica oleracea HOM05D005659 ORTHO05D007059 2.4e-54 215.7 150 70.7
SGA_v2.0_scaffold7G03995 Striga asiatica HOM05D005659 ORTHO05D007059 3.2e-54 215.3 151 72.8
Actinidia35474 Actinidia chinensis HOM05D005659 ORTHO05D007059 5.5e-54 214.5 148 74.3
BcaB07g34086 Brassica carinata HOM05D005659 ORTHO05D007059 7.1e-54 214.2 150 72.0
A09p65930 Brassica napus HOM05D005659 ORTHO05D007059 7.1e-54 214.2 150 70.0
C05p06520 Brassica napus HOM05D005659 ORTHO05D007059 7.1e-54 214.2 150 72.0
BolC5t29412H Brassica oleracea HOM05D005659 ORTHO05D007059 7.1e-54 214.2 150 72.0
BraA09t41937Z Brassica rapa HOM05D005659 ORTHO05D007059 7.1e-54 214.2 150 70.0
Sp1g07030 Schrenkiella parvula HOM05D005659 ORTHO05D007059 1.2e-53 213.4 150 71.3
Thecc.09G277800 Theobroma cacao HOM05D005659 ORTHO05D007059 2.1e-53 212.6 152 71.7
BcaC07g42532 Brassica carinata HOM05D005659 ORTHO05D007059 2.7e-53 212.2 150 70.0
A06p05400 Brassica napus HOM05D005659 ORTHO05D007059 2.7e-53 212.2 150 71.3
BraA06t23749Z Brassica rapa HOM05D005659 ORTHO05D007059 2.7e-53 212.2 150 71.3
BcaC07g41946 Brassica carinata HOM05D005659 ORTHO05D007059 4.6e-53 211.5 150 69.3
C08p50030 Brassica napus HOM05D005659 ORTHO05D007059 4.6e-53 211.5 150 69.3
Prupe.6G137400 Prunus persica HOM05D005659 ORTHO05D007059 4.6e-53 211.5 152 72.4
CDE02G1582 Ceratophyllum demersum HOM05D005659 ORTHO05D007059 7.9e-53 210.7 148 67.6
CDE08G1285 Ceratophyllum demersum HOM05D005659 ORTHO05D007059 1.3e-52 209.9 148 68.2
BcaB03g13338 Brassica carinata HOM05D005659 ORTHO05D007059 1.8e-52 209.5 150 69.3
Carub.0001s0773 Capsella rubella HOM05D005659 ORTHO05D007059 1.8e-52 209.5 151 69.5
MD11G1169900 Malus domestica HOM05D005659 ORTHO05D007059 1.8e-52 209.5 150 70.7
AT1G08380 Arabidopsis thaliana HOM05D005659 ORTHO05D007059 2.3e-52 209.1 151 69.5
Gohir.D05G082100 Gossypium hirsutum HOM05D005659 ORTHO05D007059 3.0e-52 208.8 150 70.7
Gorai.009G083700 Gossypium raimondii HOM05D005659 ORTHO05D007059 3.9e-52 208.4 150 70.7
MD03G1150500 Malus domestica HOM05D005659 ORTHO05D007059 5.1e-52 208.0 150 69.3
CARHR008270 Cardamine hirsuta HOM05D005659 ORTHO05D007059 8.7e-52 207.2 150 68.7
unitig_0.g1472 Utricularia gibba HOM05D005659 ORTHO05D007059 1.5e-51 206.5 144 71.5
RcHm_v2.0_Chr5g0046981 Rosa chinensis HOM05D005659 ORTHO05D007059 2.5e-51 205.7 153 68.6
Sed0025059 Sechium edule HOM05D005659 ORTHO05D007059 2.5e-51 205.7 150 66.7
Gohir.A05G079200 Gossypium hirsutum HOM05D005659 ORTHO05D007059 3.3e-51 205.3 150 69.3
PSO339G3866 Papaver somniferum HOM05D005659 ORTHO05D007059 3.3e-51 205.3 151 68.2
CsaV3_1G015100 Cucumis sativus L. HOM05D005659 ORTHO05D007059 4.3e-51 204.9 150 68.0
Migut.D02409 Erythranthe guttata HOM05D005659 ORTHO05D007059 5.6e-51 204.5 114 81.6
A08p35240 Brassica napus HOM05D005659 ORTHO05D007059 7.4e-51 204.1 138 70.3
PSO384G5049 Papaver somniferum HOM05D005659 ORTHO05D007059 7.4e-51 204.1 151 68.2
arahy.Tifrunner.gnm1.ann1.MVQ7LV Arachis hypogaea HOM05D005659 ORTHO05D007059 1.6e-50 203.0 133 73.7
Gohir.D07G115000 Gossypium hirsutum HOM05D005659 ORTHO05D007059 2.1e-50 202.6 151 69.5
Lsat_1_v5_gn_7_85921 Lactuca sativa HOM05D005659 ORTHO05D007059 2.1e-50 202.6 149 69.8
Lj3g0027363 Lotus japonicus HOM05D005659 ORTHO05D007059 2.1e-50 202.6 149 67.8
FAN11G1786 Fragaria x ananassa HOM05D005659 ORTHO05D007059 3.7e-50 201.8 153 71.2
Gorai.001G123200 Gossypium raimondii HOM05D005659 ORTHO05D007059 3.7e-50 201.8 151 69.5
arahy.Tifrunner.gnm1.ann1.QDSR7W Arachis hypogaea HOM05D005659 ORTHO05D007059 6.2e-50 201.1 133 73.7
Glyma.12G092000 Glycine max HOM05D005659 ORTHO05D007059 6.2e-50 201.1 148 68.9
EL10Ac4g08170 Beta vulgaris HOM05D005659 ORTHO05D007059 1.8e-49 199.5 115 83.5
vmacro14338 Vaccinium macrocarpon HOM05D005659 ORTHO05D007059 1.8e-49 199.5 153 68.6
AL1G18790 Arabidopsis lyrata HOM05D005659 ORTHO05D007059 3.1e-49 198.7 115 77.4
FvH4_3g25770 Fragaria vesca HOM05D005659 ORTHO05D007059 3.1e-49 198.7 153 70.6
Aqoxy4G02709 Aquilegia oxysepala HOM05D005659 ORTHO05D007059 4.0e-49 198.4 151 66.2
THA.LOC104826438 Tarenaya hassleriana HOM05D005659 ORTHO05D007059 5.3e-49 198.0 153 65.4
FAN21G2850 Fragaria x ananassa HOM05D005659 ORTHO05D007059 6.9e-49 197.6 153 69.9
Lalb_Chr03g0028281 Lupinus albus HOM05D005659 ORTHO05D007059 9.0e-49 197.2 149 67.8
FAN25G1572 Fragaria x ananassa HOM05D005659 ORTHO05D007059 2.0e-48 196.1 153 69.3
MELO3C025587.2 Cucumis melo HOM05D005659 ORTHO05D007059 2.6e-48 195.7 177 58.8
FAN16G1033 Fragaria x ananassa HOM05D005659 ORTHO05D007059 5.8e-48 194.5 153 68.6
BraA08t35432Z Brassica rapa HOM05D005659 ORTHO05D007059 7.6e-48 194.1 138 68.8
VMungo1127G0741 Vigna mungo HOM05D005659 ORTHO05D007059 1.0e-47 193.7 149 64.4
ATR0579G079 Amborella trichopoda HOM05D005659 ORTHO05D007059 1.7e-47 193.0 149 67.8
Glyma.11G181100 Glycine max HOM05D005659 ORTHO05D007059 1.7e-47 193.0 148 66.2
Medtr4g052420 Medicago truncatula HOM05D005659 ORTHO05D007059 1.7e-47 193.0 120 74.2
Phvul.011G096400 Phaseolus vulgaris HOM05D005659 ORTHO05D007059 1.7e-47 193.0 149 63.8
Ca_26075_v3 Cicer arietinum L. HOM05D005659 ORTHO05D007059 1.4e-46 189.9 150 65.3
Psat7g186640 Pisum sativum HOM05D005659 ORTHO05D007059 3.2e-46 188.7 149 64.4
TPR.G17220 Trifolium pratense HOM05D005659 ORTHO05D007059 3.2e-46 188.7 123 74.0
TAR633G2174 Trochodendron aralioides HOM05D005659 ORTHO05D007059 3.2e-46 188.7 121 81.0
Duzib170G0332 Durio zibethinus HOM05D005659 ORTHO05D007059 1.2e-45 186.8 151 64.2
C08p03620 Brassica napus HOM05D005659 ORTHO05D007059 8.7e-44 180.6 114 71.9
Os04g0414700 Oryza sativa ssp. japonica HOM05D005659 ORTHO05D007059 2.5e-43 179.1 146 63.7
Pp3c15_16690 Physcomitrium patens HOM05D005659 ORTHO05D007059 2.5e-43 179.1 151 63.6
HPP92_009876 Vanilla planifolia HOM05D005659 ORTHO05D007059 2.5e-43 179.1 152 63.2
SEGI_08129 Sequoiadendron giganteum HOM05D005659 ORTHO05D007059 3.3e-43 178.7 141 63.8
Nn2g14238 Nelumbo nucifera HOM05D005659 ORTHO05D007059 1.6e-42 176.4 121 72.7
Mapoly0064s0077 Marchantia polymorpha HOM05D005659 ORTHO05D007059 2.1e-42 176.0 150 61.3
Pp3c15_16700 Physcomitrium patens HOM05D005659 ORTHO05D007059 3.7e-42 175.3 150 62.0
QL01p011787 Quercus lobata HOM05D005659 ORTHO05D007059 5.9e-40 167.9 121 73.6
Zm00001eb083680 Zea mays HOM05D005659 ORTHO05D007059 2.2e-39 166.0 96 77.1
Nitab4.5_0000937g0110 Nicotiana tabacum HOM05D005659 ORTHO05D007059 5.0e-39 164.9 84 84.5
SMO163G0051 Selaginella moellendorffii HOM05D005659 ORTHO05D007059 2.5e-38 162.5 90 78.9
AUR62001528 Chenopodium quinoa HOM05D005659 ORTHO05D007059 1.0e-36 157.1 123 70.7
ClCG01G011760 Citrullus lanatus HOM05D005659 ORTHO05D007059 5.1e-36 154.8 86 76.7
Rhsim01G0203000 Rhododendron simsii HOM05D005659 ORTHO05D007059 3.1e-33 145.6 117 67.5
BcaB03g13340 Brassica carinata HOM05D005659 ORTHO05D007059 1.5e-32 143.3 117 59.8
ATR0772G031 Amborella trichopoda HOM05D005659 ORTHO05D007059 2.6e-32 142.5 120 65.0
Hund18778 Selenicereus undatus HOM05D005659 ORTHO05D007059 1.1e-30 137.1 121 63.6
Nitab4.5_0005472g0080 Nicotiana tabacum HOM05D005659 ORTHO05D007059 4.2e-30 135.2 120 66.7
TAR623G1200 Trochodendron aralioides HOM05D005659 ORTHO05D007059 2.7e-29 132.5 92 76.1
Ah.08g223250 Amaranthus hybridus HOM05D005659 ORTHO05D007059 7.9e-29 131.0 124 64.5
unitig_88.g27645 Utricularia gibba HOM05D005659 ORTHO05D007059 3.9e-28 128.6 89 69.7
Thhalv10009047m.g Eutrema salsugineum HOM05D005659 ORTHO05D007059 4.5e-24 115.2 150 48.0
Cre07.g334550 Chlamydomonas reinhardtii HOM05D005659 ORTHO05D007059 2.2e-23 112.8 108 50.9
Manes.11G164551 Manihot esculenta HOM05D005659 ORTHO05D007059 2.0e-19 99.8 94 58.5
Peaxi162Scf00345g01024 Petunia axillaris HOM05D005659 ORTHO05D007059 4.8e-18 95.1 165 43.0
MCO01G581 Micromonas commoda HOM05D005659 ORTHO05D007059 2.6e-16 89.4 144 36.8
Nitab4.5_0003068g0060 Nicotiana tabacum HOM05D005659 ORTHO05D007059 2.2e-15 86.3 88 64.8
MD11G1234000 Malus domestica HOM05D005659 ORTHO05D007059 8.8e-12 74.3 80 60.0
Gohir.A07G111250 Gossypium hirsutum HOM05D005659 ORTHO05D007059 4.4e-11 72.0 74 62.2
MD17G1209900 Malus domestica HOM05D005659 ORTHO05D007059 1.7e-10 70.1 80 61.2


User provided reference genes

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