Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022095 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.6e-64 248.1 122 100.0
CSS0006550 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.4e-60 236.1 120 96.7
CSS0049632 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 7.0e-60 233.8 120 95.8
CSS0019709 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.6e-59 232.6 120 95.0
CSS0029746 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 5.9e-59 230.7 120 95.0
CSS0047764 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.0e-55 219.9 120 90.8
Dinv42816 Davidia involucrata HOM05D006038 ORTHO05D007547 2.7e-51 205.3 120 82.5
Dinv43284 Davidia involucrata HOM05D006038 ORTHO05D007547 2.7e-51 205.3 120 82.5
Actinidia38659 Actinidia chinensis HOM05D006038 ORTHO05D007547 1.1e-49 199.9 120 80.8
vmacro06051 Vaccinium macrocarpon HOM05D006038 ORTHO05D007547 1.1e-49 199.9 120 80.8
CSS0009428 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.9e-49 199.1 106 92.5
Oeu027617.1 Olea europaea HOM05D006038 ORTHO05D007547 1.6e-48 196.1 120 76.7
GSVIVG01023690001 Vitis vinifera HOM05D006038 ORTHO05D007547 1.6e-48 196.1 120 77.5
Manes.14G113700 Manihot esculenta HOM05D006038 ORTHO05D007547 3.6e-48 194.9 119 75.6
CANSAT11G1787 Cannabis sativa HOM05D006038 ORTHO05D007547 1.8e-47 192.6 122 74.6
Nitab4.5_0002809g0020 Nicotiana tabacum HOM05D006038 ORTHO05D007547 1.8e-47 192.6 124 72.6
Sopen07g002150 Solanum pennellii HOM05D006038 ORTHO05D007547 3.1e-47 191.8 122 74.6
PGSC0003DMG400011212 Solanum tuberosum HOM05D006038 ORTHO05D007547 3.1e-47 191.8 122 74.6
Ciclev10008825m.g Citrus clementina HOM05D006038 ORTHO05D007547 6.8e-47 190.7 118 78.0
Solyc07g006010.3 Solanum lycopersicum HOM05D006038 ORTHO05D007547 1.5e-46 189.5 122 73.8
Thecc.09G154200 Theobroma cacao HOM05D006038 ORTHO05D007547 1.5e-46 189.5 122 77.0
AL7G21280 Arabidopsis lyrata HOM05D006038 ORTHO05D007547 3.4e-46 188.3 118 76.3
Haze_19138 Corylus avellana HOM05D006038 ORTHO05D007547 3.4e-46 188.3 121 73.6
TAR625G0922 Trochodendron aralioides HOM05D006038 ORTHO05D007547 3.4e-46 188.3 120 76.7
Cc06_g14480 Coffea canephora HOM05D006038 ORTHO05D007547 4.4e-46 188.0 122 76.2
AT4G30840 Arabidopsis thaliana HOM05D006038 ORTHO05D007547 5.8e-46 187.6 118 75.4
Gohir.A05G007900 Gossypium hirsutum HOM05D006038 ORTHO05D007547 5.8e-46 187.6 122 74.6
CAN.G1190.21 Capsicum annuum HOM05D006038 ORTHO05D007547 7.5e-46 187.2 122 73.8
TWI63G0196 Tripterygium wilfordii HOM05D006038 ORTHO05D007547 7.5e-46 187.2 122 73.0
CARHR238700 Cardamine hirsuta HOM05D006038 ORTHO05D007547 9.8e-46 186.8 118 75.4
CiPaw.15G164200 Carya illinoinensis HOM05D006038 ORTHO05D007547 9.8e-46 186.8 120 74.2
Gohir.D05G008700 Gossypium hirsutum HOM05D006038 ORTHO05D007547 9.8e-46 186.8 122 74.6
Gorai.009G008900 Gossypium raimondii HOM05D006038 ORTHO05D007547 9.8e-46 186.8 122 74.6
MD10G1281400 Malus domestica HOM05D006038 ORTHO05D007547 1.7e-45 186.0 120 78.3
Prupe.1G102000 Prunus persica HOM05D006038 ORTHO05D007547 4.9e-45 184.5 122 76.2
Carub.0007s0972 Capsella rubella HOM05D006038 ORTHO05D007547 8.3e-45 183.7 118 73.7
BcaNung02736 Brassica carinata HOM05D006038 ORTHO05D007547 1.1e-44 183.3 118 74.6
BraA03t15077Z Brassica rapa HOM05D006038 ORTHO05D007547 1.4e-44 183.0 118 73.7
Sp7g28720 Schrenkiella parvula HOM05D006038 ORTHO05D007547 1.4e-44 183.0 118 73.7
Cfa020781 Carpinus fangiana HOM05D006038 ORTHO05D007547 2.4e-44 182.2 120 72.5
QL02p094222 Quercus lobata HOM05D006038 ORTHO05D007547 2.4e-44 182.2 120 71.7
Aa31LG2G19530 Aethionema arabicum HOM05D006038 ORTHO05D007547 3.2e-44 181.8 118 71.2
Hund08960 Selenicereus undatus HOM05D006038 ORTHO05D007547 3.2e-44 181.8 121 71.1
Peaxi162Scf00563g00418 Petunia axillaris HOM05D006038 ORTHO05D007547 4.1e-44 181.4 122 71.3
PGR114G0005 Punica granatum HOM05D006038 ORTHO05D007547 4.1e-44 181.4 122 73.0
PGR142G2424 Punica granatum HOM05D006038 ORTHO05D007547 4.1e-44 181.4 122 73.0
EL10Ac8g18905 Beta vulgaris HOM05D006038 ORTHO05D007547 7.1e-44 180.6 122 71.3
Potri.006G180300 Populus trichocarpa HOM05D006038 ORTHO05D007547 1.2e-43 179.9 119 70.6
THA.LOC104803556 Tarenaya hassleriana HOM05D006038 ORTHO05D007547 1.2e-43 179.9 118 71.2
Sabra06G0137300 Salix brachista HOM05D006038 ORTHO05D007547 2.1e-43 179.1 119 70.6
SGA_v2.0_scaffold265G46074 Striga asiatica HOM05D006038 ORTHO05D007547 2.7e-43 178.7 124 71.0
Atru.chr7.352 Acer truncatum HOM05D006038 ORTHO05D007547 3.5e-43 178.3 118 72.0
Aqoxy7G02400 Aquilegia oxysepala HOM05D006038 ORTHO05D007547 4.6e-43 177.9 120 70.0
Glyma.02G206900 Glycine max HOM05D006038 ORTHO05D007547 4.6e-43 177.9 118 72.0
Rhsim03G0259500 Rhododendron simsii HOM05D006038 ORTHO05D007547 4.6e-43 177.9 111 78.4
Nn8g40105 Nelumbo nucifera HOM05D006038 ORTHO05D007547 1.0e-42 176.8 120 68.3
RcHm_v2.0_Chr4g0405491 Rosa chinensis HOM05D006038 ORTHO05D007547 1.3e-42 176.4 120 75.8
Cpa.g.sc199.14 Carica papaya HOM05D006038 ORTHO05D007547 1.7e-42 176.0 118 71.2
AUR62028377 Chenopodium quinoa HOM05D006038 ORTHO05D007547 2.3e-42 175.6 122 70.5
Lj4g0023904 Lotus japonicus HOM05D006038 ORTHO05D007547 3.0e-42 175.3 122 71.3
DCAR_020091 Daucus carota HOM05D006038 ORTHO05D007547 3.9e-42 174.9 121 68.6
FvH4_4g09770 Fragaria vesca HOM05D006038 ORTHO05D007547 8.6e-42 173.7 120 73.3
FAN07G2585 Fragaria x ananassa HOM05D006038 ORTHO05D007547 8.6e-42 173.7 120 73.3
Glyma.17G071100 Glycine max HOM05D006038 ORTHO05D007547 8.6e-42 173.7 121 71.1
Migut.J01393 Erythranthe guttata HOM05D006038 ORTHO05D007547 1.1e-41 173.3 121 68.6
FAN22G1283 Fragaria x ananassa HOM05D006038 ORTHO05D007547 1.1e-41 173.3 120 73.3
Lalb_Chr13g0300671 Lupinus albus HOM05D006038 ORTHO05D007547 1.1e-41 173.3 120 70.0
TPR.G22112 Trifolium pratense HOM05D006038 ORTHO05D007547 1.9e-41 172.6 122 68.9
AUR62025374 Chenopodium quinoa HOM05D006038 ORTHO05D007547 2.5e-41 172.2 122 68.9
FAN17G0258 Fragaria x ananassa HOM05D006038 ORTHO05D007547 2.5e-41 172.2 120 72.5
Lj7A464G38 Lonicera japonica HOM05D006038 ORTHO05D007547 2.5e-41 172.2 126 71.4
Phvul.003G153400 Phaseolus vulgaris HOM05D006038 ORTHO05D007547 2.5e-41 172.2 122 69.7
MSTRG.6162 Avicennia marina HOM05D006038 ORTHO05D007547 5.6e-41 171.0 121 66.1
VMungo1215G1375 Vigna mungo HOM05D006038 ORTHO05D007547 9.5e-41 170.2 122 68.0
Ca_21155_v3 Cicer arietinum L. HOM05D006038 ORTHO05D007547 1.6e-40 169.5 120 69.2
Psat4g010160 Pisum sativum HOM05D006038 ORTHO05D007547 3.6e-40 168.3 122 66.4
ECA236G4218 Erigeron canadensis HOM05D006038 ORTHO05D007547 4.7e-40 167.9 121 70.2
Nitab4.5_0001036g0170 Nicotiana tabacum HOM05D006038 ORTHO05D007547 4.7e-40 167.9 106 74.5
MELO3C004111.2 Cucumis melo HOM05D006038 ORTHO05D007547 1.1e-39 166.8 122 63.9
Sed0013580 Sechium edule HOM05D006038 ORTHO05D007547 3.1e-39 165.2 122 63.1
CsaV3_2G007740 Cucumis sativus L. HOM05D006038 ORTHO05D007547 4.0e-39 164.9 120 63.3
Medtr4g130280 Medicago truncatula HOM05D006038 ORTHO05D007547 6.8e-39 164.1 122 66.4
PSO170G4900 Papaver somniferum HOM05D006038 ORTHO05D007547 6.8e-39 164.1 119 65.5
ClCG02G014260 Citrullus lanatus HOM05D006038 ORTHO05D007547 2.6e-38 162.2 121 62.0
BcaNung01557 Brassica carinata HOM05D006038 ORTHO05D007547 4.4e-38 161.4 101 76.2
PSO017G0013 Papaver somniferum HOM05D006038 ORTHO05D007547 4.4e-38 161.4 120 64.2
Os08g0266600 Oryza sativa ssp. japonica HOM05D006038 ORTHO05D007547 1.3e-37 159.8 119 63.9
HanXRQChr06g0179781 Helianthus annuus HOM05D006038 ORTHO05D007547 1.7e-37 159.5 122 66.4
C07p58240 Brassica napus HOM05D006038 ORTHO05D007547 2.9e-37 158.7 101 75.2
BolC7t46282H Brassica oleracea HOM05D006038 ORTHO05D007547 2.9e-37 158.7 101 75.2
A03p60370 Brassica napus HOM05D006038 ORTHO05D007547 6.4e-37 157.5 101 74.3
MBI15_g26068_MAGBIO Magnolia biondii HOM05D006038 ORTHO05D007547 9.2e-36 153.7 103 70.9
Sc14g0000990 Simmondsia chinensis HOM05D006038 ORTHO05D007547 1.2e-35 153.3 124 58.9
CDE04G0171 Ceratophyllum demersum HOM05D006038 ORTHO05D007547 3.5e-35 151.8 120 64.2
ATR0580G061 Amborella trichopoda HOM05D006038 ORTHO05D007547 7.8e-35 150.6 118 63.6
HPP92_020613 Vanilla planifolia HOM05D006038 ORTHO05D007547 7.8e-35 150.6 119 62.2
Zm00001eb177980 Zea mays HOM05D006038 ORTHO05D007547 5.1e-34 147.9 119 60.5
Ah.14g084370 Amaranthus hybridus HOM05D001135 ORTHO05D001005 1.1e-33 146.7 105 69.5
SEGI_08614 Sequoiadendron giganteum HOM05D006038 ORTHO05D007547 2.5e-33 145.6 121 57.9
Eucgr.K03188 Eucalyptus grandis HOM05D006038 ORTHO05D007547 4.3e-33 144.8 104 70.2
Lsat_1_v5_gn_8_64821 Lactuca sativa HOM05D006038 ORTHO05D007547 6.8e-31 137.5 107 63.6
SMO367G0193 Selaginella moellendorffii HOM05D006038 ORTHO05D007547 1.6e-27 126.3 118 50.0
CSS0047172 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.0e-26 123.6 66 92.4
CSS0031036 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.3e-24 116.7 66 86.4
CSS0034156 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.9e-20 102.8 66 80.3
AagrBONN_evm.TU.Sc2ySwM_117.2538 Anthoceros agrestis HOM05D006038 ORTHO05D007547 3.5e-19 98.6 159 37.1
CBR_g22430 Chara braunii HOM05D006038 ORTHO05D007547 2.3e-18 95.9 142 37.3
Pp3c6_28770 Physcomitrium patens HOM05D006038 ORTHO05D007547 2.5e-17 92.4 118 41.5
SHI18668 Sapria himalayana HOM05D006038 ORTHO05D007547 6.2e-16 87.8 80 56.2
Zm00001eb124580 Zea mays HOM05D006038 ORTHO05D007547 7.1e-12 74.3 52 63.5
Zm00001eb038770 Zea mays HOM05D006038 ORTHO05D007547 3.5e-11 72.0 53 64.2
Zm00001eb046820 Zea mays HOM05D006038 ORTHO05D007547 3.5e-11 72.0 53 64.2
Zm00001eb051760 Zea mays HOM05D006038 ORTHO05D007547 3.5e-11 72.0 53 64.2
Zm00001eb369920 Zea mays HOM05D006038 ORTHO05D007547 4.6e-11 71.6 68 54.4
Zm00001eb253640 Zea mays HOM05D006038 ORTHO05D007547 6.0e-11 71.2 50 66.0
Thhalv10025548m.g Eutrema salsugineum HOM05D006038 ORTHO05D007547 7.4e-09 64.3 71 47.9
A01p07320 Brassica napus HOM05D006038 ORTHO05D007547 5.3e-07 58.2 36 75.0
Zm00001eb021100 Zea mays HOM05D002913 ORTHO05D026003 6.9e-07 57.8 49 57.1
Zm00001eb156390 Zea mays HOM05D009386 ORTHO05D011419 6.9e-07 57.8 49 57.1
Zm00001eb343430 Zea mays HOM05D002913 ORTHO05D020952 6.9e-07 57.8 49 57.1
Zm00001eb354900 Zea mays HOM05D002913 ORTHO05D026003 6.9e-07 57.8 49 57.1


User provided reference genes

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