Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022090 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 2.1e-239 832.0 433 100.0
Actinidia35226 Actinidia chinensis HOM05D006105 ORTHO05D006345 2.6e-133 479.6 455 63.1
Actinidia18787 Actinidia chinensis HOM05D006105 ORTHO05D006345 3.9e-129 465.7 455 62.2
CSS0026032 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 9.6e-128 461.1 457 60.2
Rhsim06G0204700 Rhododendron simsii HOM05D006105 ORTHO05D006345 4.6e-114 415.6 449 58.8
Actinidia07497 Actinidia chinensis HOM05D006105 ORTHO05D006345 5.7e-112 408.7 407 60.4
Dinv14962 Davidia involucrata HOM05D006105 ORTHO05D006345 5.0e-108 395.6 402 59.7
Rhsim04G0024000 Rhododendron simsii HOM05D006105 ORTHO05D006345 2.0e-101 373.6 463 54.9
Hma1.2p1_0416F.1_g148610 Hydrangea macrophylla HOM05D006105 ORTHO05D006345 3.3e-96 356.3 403 56.1
Hma1.2p1_0688F.1_g203660 Hydrangea macrophylla HOM05D006105 ORTHO05D006345 5.9e-93 345.5 413 54.0
Lj8A152T79 Lonicera japonica HOM05D006105 ORTHO05D006345 2.2e-92 343.6 357 56.6
Prupe.4G171200 Prunus persica HOM05D006105 ORTHO05D006345 1.2e-85 321.2 472 47.5
Dinv18338 Davidia involucrata HOM05D006105 ORTHO05D006345 4.5e-85 319.3 319 60.2
QL08p027367 Quercus lobata HOM05D006105 ORTHO05D006345 8.0e-82 308.5 403 52.1
Oeu005394.1 Olea europaea HOM05D006105 ORTHO05D006345 1.1e-80 304.7 407 49.4
Nitab4.5_0005445g0040 Nicotiana tabacum HOM05D006105 ORTHO05D006345 1.1e-78 298.1 456 48.9
GSVIVG01014239001 Vitis vinifera HOM05D006105 ORTHO05D006345 4.1e-78 296.2 405 49.9
Sopen12g005900 Solanum pennellii HOM05D006105 ORTHO05D006345 1.2e-77 294.7 458 48.3
CSS0004572 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 3.5e-77 293.1 230 67.4
FAN21G1974 Fragaria x ananassa HOM05D006105 ORTHO05D006345 5.5e-75 285.8 438 46.6
PGSC0003DMG400015376 Solanum tuberosum HOM05D006105 ORTHO05D006345 2.3e-73 280.4 490 45.9
Ciclev10010617m.g Citrus clementina HOM05D006105 ORTHO05D006345 2.6e-72 276.9 444 45.0
MSTRG.14216 Avicennia marina HOM05D006105 ORTHO05D006345 4.4e-72 276.2 423 46.1
FAN16G1829 Fragaria x ananassa HOM05D006105 ORTHO05D006345 4.4e-72 276.2 443 45.1
FAN25G1303 Fragaria x ananassa HOM05D006105 ORTHO05D006345 5.7e-72 275.8 442 45.5
Haze_09360 Corylus avellana HOM05D006105 ORTHO05D006345 8.3e-71 271.9 412 48.1
Gohir.A08G021700 Gossypium hirsutum HOM05D006105 ORTHO05D006345 8.3e-71 271.9 422 46.4
Thecc.07G103600 Theobroma cacao HOM05D006105 ORTHO05D006345 1.1e-70 271.6 441 45.8
FvH4_3g18750 Fragaria vesca HOM05D006105 ORTHO05D006345 2.4e-70 270.4 441 44.9
FAN11G0448 Fragaria x ananassa HOM05D006105 ORTHO05D006345 3.1e-70 270.0 442 44.6
HanXRQChr10g0304731 Helianthus annuus HOM05D006105 ORTHO05D006345 4.1e-70 269.6 456 49.6
DCAR_019586 Daucus carota HOM05D006105 ORTHO05D006345 9.1e-70 268.5 459 43.4
Gorai.004G029900 Gossypium raimondii HOM05D006105 ORTHO05D006345 2.0e-69 267.3 421 46.3
COL.COLO4_17616 Corchorus olitorius HOM05D006105 ORTHO05D006345 5.9e-69 265.8 476 43.5
Gohir.D08G032500 Gossypium hirsutum HOM05D006105 ORTHO05D006345 5.0e-68 262.7 423 45.9
RcHm_v2.0_Chr5g0031561 Rosa chinensis HOM05D006105 ORTHO05D006345 1.9e-67 260.8 437 46.7
Duzib213G0100 Durio zibethinus HOM05D006105 ORTHO05D006345 7.2e-67 258.8 468 43.6
MD03G1238800 Malus domestica HOM05D006105 ORTHO05D006345 9.4e-67 258.5 442 45.2
Manes.03G103501 Manihot esculenta HOM05D006105 ORTHO05D006345 9.4e-67 258.5 451 43.2
ECA234G3938 Erigeron canadensis HOM05D006105 ORTHO05D006345 1.2e-66 258.1 459 47.1
CiPaw.12G115300 Carya illinoinensis HOM05D006105 ORTHO05D006345 4.7e-66 256.1 414 46.4
Peaxi162Scf00000g02515 Petunia axillaris HOM05D006105 ORTHO05D006345 1.2e-64 251.5 433 45.7
Cfa019604 Carpinus fangiana HOM05D006105 ORTHO05D006345 1.5e-64 251.1 418 46.7
Duzib268G0903 Durio zibethinus HOM05D006105 ORTHO05D006345 3.7e-63 246.5 467 42.2
TWI38G0440 Tripterygium wilfordii HOM05D006105 ORTHO05D006345 1.1e-62 245.0 409 45.5
MSTRG.14950 Avicennia marina HOM05D006105 ORTHO05D006345 7.0e-62 242.3 406 43.8
Cpa.g.sc131.73 Carica papaya HOM05D006105 ORTHO05D006345 1.2e-61 241.5 467 40.7
CiPaw.11G164300 Carya illinoinensis HOM05D006105 ORTHO05D006345 5.9e-61 239.2 423 43.3
Oeu059277.1 Olea europaea HOM05D006105 ORTHO05D006345 1.1e-59 235.0 415 41.9
Potri.001G375600 Populus trichocarpa HOM05D006105 ORTHO05D006345 1.5e-59 234.6 456 41.7
Nitab4.5_0003077g0030 Nicotiana tabacum HOM05D006105 ORTHO05D006345 3.3e-59 233.4 469 41.8
TAR629G0423 Trochodendron aralioides HOM05D000109 ORTHO05D000965 5.5e-59 232.6 405 42.5
TAR629G1657 Trochodendron aralioides HOM05D006105 ORTHO05D006345 7.2e-59 232.3 450 43.1
MD11G1258600 Malus domestica HOM05D006105 ORTHO05D006345 5.2e-57 226.1 447 41.8
Nn1g09023 Nelumbo nucifera HOM05D006105 ORTHO05D006345 1.5e-56 224.6 465 42.2
Sc03g0010360 Simmondsia chinensis HOM05D006105 ORTHO05D006345 2.9e-55 220.3 365 43.6
PSO541G5705 Papaver somniferum HOM05D006105 ORTHO05D006345 5.4e-54 216.1 471 38.6
Lsat_1_v5_gn_5_129201 Lactuca sativa HOM05D006105 ORTHO05D006345 4.6e-53 213.0 470 42.3
VMungo1080G1877 Vigna mungo HOM05D006105 ORTHO05D006345 1.7e-52 211.1 421 42.0
AUR62019562 Chenopodium quinoa HOM05D006105 ORTHO05D006345 2.3e-52 210.7 427 37.9
Nitab4.5_0003202g0040 Nicotiana tabacum HOM05D006105 ORTHO05D006345 2.9e-52 210.3 417 41.2
AUR62037870 Chenopodium quinoa HOM05D006105 ORTHO05D006345 1.1e-51 208.4 423 39.7
TWI39G0145 Tripterygium wilfordii HOM05D006105 ORTHO05D006345 1.1e-51 208.4 458 41.9
PSO675G6909 Papaver somniferum HOM05D006105 ORTHO05D006345 2.5e-51 207.2 472 37.9
DCAR_013141 Daucus carota HOM05D006105 ORTHO05D006345 7.3e-51 205.7 444 40.8
Peaxi162Scf00069g01930 Petunia axillaris HOM05D006105 ORTHO05D006345 7.3e-51 205.7 425 39.1
Cc05_g11450 Coffea canephora HOM05D006105 ORTHO05D006345 2.1e-50 204.1 254 47.6
DCAR_021012 Daucus carota HOM05D006105 ORTHO05D006345 1.8e-49 201.1 397 41.3
Nitab4.5_0000246g0110 Nicotiana tabacum HOM05D006105 ORTHO05D006345 1.8e-49 201.1 440 37.0
Phvul.005G068000 Phaseolus vulgaris HOM05D006105 ORTHO05D006345 6.8e-49 199.1 425 40.9
MBI07_g17039_MAGBIO Magnolia biondii HOM05D006105 ORTHO05D006345 1.5e-48 198.0 406 43.1
Gorai.002G064700 Gossypium raimondii HOM05D006105 ORTHO05D006345 2.0e-48 197.6 450 40.4
Atru.chr2.2260 Acer truncatum HOM05D006105 ORTHO05D006345 4.4e-48 196.4 384 41.9
Glyma.12G228100 Glycine max HOM05D006105 ORTHO05D006345 1.7e-47 194.5 421 40.6
Gohir.D01G045100 Gossypium hirsutum HOM05D006105 ORTHO05D006345 3.9e-44 183.3 448 39.7
Glyma.13G271900 Glycine max HOM05D006105 ORTHO05D006345 1.1e-43 181.8 423 40.9
Solyc07g062685.2 Solanum lycopersicum HOM05D006105 ORTHO05D006345 1.9e-43 181.0 398 39.7
SGA_v2.0_scaffold73G24208 Striga asiatica HOM05D006105 ORTHO05D006345 1.9e-43 181.0 425 38.1
Lj3g0024128 Lotus japonicus HOM05D006105 ORTHO05D006345 2.5e-43 180.6 408 39.2
Lalb_Chr25g0286021 Lupinus albus HOM05D006105 ORTHO05D006345 2.5e-43 180.6 415 38.3
HanXRQChr12g0372831 Helianthus annuus HOM05D006105 ORTHO05D006345 3.3e-43 180.3 442 40.0
PGSC0003DMG400021273 Solanum tuberosum HOM05D006105 ORTHO05D006345 7.3e-43 179.1 395 37.2
Sopen07g030920 Solanum pennellii HOM05D006105 ORTHO05D006345 1.1e-41 175.3 405 38.5
Solyc12g014120.3 Solanum lycopersicum HOM05D006105 ORTHO05D006345 5.2e-41 172.9 225 48.0
arahy.Tifrunner.gnm1.ann1.KE6FEG Arachis hypogaea HOM05D006105 ORTHO05D006345 3.4e-40 170.2 406 36.7
ClCG11G017660 Citrullus lanatus HOM05D006105 ORTHO05D006345 3.2e-38 163.7 463 36.3
Aqoxy1G02199 Aquilegia oxysepala HOM05D006105 ORTHO05D006345 4.1e-38 163.3 468 37.2
Sabra16G0247400 Salix brachista HOM05D006105 ORTHO05D006345 1.6e-37 161.4 424 36.8
Oeu061338.1 Olea europaea HOM05D006105 ORTHO05D006345 3.5e-37 160.2 229 46.7
DCAR_024487 Daucus carota HOM05D006105 ORTHO05D006345 7.8e-37 159.1 366 35.8
MELO3C025628.2 Cucumis melo HOM05D006105 ORTHO05D006345 1.7e-36 157.9 468 35.5
CsaV3_4G033280 Cucumis sativus L. HOM05D006105 ORTHO05D006345 8.6e-36 155.6 461 35.4
SalBow7G3373 Salvia bowleyana HOM05D006105 ORTHO05D006345 2.8e-34 150.6 407 35.6
MELO3C016090.2 Cucumis melo HOM05D006105 ORTHO05D006345 4.7e-34 149.8 417 34.5
SalBow7G2198 Salvia bowleyana HOM05D006105 ORTHO05D006345 8.1e-34 149.1 407 35.4
CsaV3_4G008420 Cucumis sativus L. HOM05D006105 ORTHO05D006345 1.1e-33 148.7 417 35.0
Sed0015488 Sechium edule HOM05D006105 ORTHO05D006345 1.8e-33 147.9 410 36.8
ClCG07G009910 Citrullus lanatus HOM05D006105 ORTHO05D006345 2.3e-33 147.5 405 36.5
Ca_04016_v3 Cicer arietinum L. HOM05D006105 ORTHO05D006345 5.2e-33 146.4 447 34.7
arahy.Tifrunner.gnm1.ann1.TTJ9YL Arachis hypogaea HOM05D006105 ORTHO05D006345 6.8e-33 146.0 399 33.8
TPR.G9213 Trifolium pratense HOM05D006105 ORTHO05D006345 6.8e-33 146.0 431 34.6
arahy.Tifrunner.gnm1.ann1.LEI4AX Arachis hypogaea HOM05D006105 ORTHO05D006345 2.6e-32 144.1 413 34.1
Glyma.06G232600 Glycine max HOM05D006105 ORTHO05D006345 2.6e-32 144.1 403 36.5
Sed0005720 Sechium edule HOM05D006105 ORTHO05D006345 1.3e-31 141.7 458 34.3
Gohir.A01G059000 Gossypium hirsutum HOM05D006105 ORTHO05D006345 2.9e-31 140.6 312 40.7
Sed0026435 Sechium edule HOM05D006105 ORTHO05D006345 4.9e-31 139.8 415 36.4
SGA_v2.0_scaffold34G13768 Striga asiatica HOM05D006105 ORTHO05D006345 1.1e-30 138.7 443 37.0
Medtr2g078220 Medicago truncatula HOM05D006105 ORTHO05D006345 1.4e-30 138.3 436 32.8
SalBow8G2605 Salvia bowleyana HOM05D006105 ORTHO05D006345 3.5e-29 133.7 408 33.3
Dinv17387 Davidia involucrata HOM05D006105 ORTHO05D006345 5.6e-27 126.3 433 34.9
PGSC0003DMG400012397 Solanum tuberosum HOM05D006105 ORTHO05D006345 7.3e-27 125.9 225 41.3
Migut.M00751 Erythranthe guttata HOM05D006105 ORTHO05D006345 1.6e-26 124.8 398 32.9
VMungo1127G1756 Vigna mungo HOM05D006105 ORTHO05D006345 4.7e-26 123.2 353 35.7
Phvul.011G157100 Phaseolus vulgaris HOM05D006105 ORTHO05D006345 1.1e-25 122.1 400 33.8
Eucgr.F01202 Eucalyptus grandis HOM05D006105 ORTHO05D006345 8.9e-25 119.0 280 38.2
ECA236G3415 Erigeron canadensis HOM05D006105 ORTHO05D006345 2.6e-24 117.5 261 37.5
Sopen10g003350 Solanum pennellii HOM05D016660 ORTHO05D006345 4.4e-24 116.7 209 40.2
Nn1g04330 Nelumbo nucifera HOM05D006105 ORTHO05D006345 1.3e-23 115.2 234 43.6
Manes.17G052800 Manihot esculenta HOM05D013066 ORTHO05D010890 8.4e-23 112.5 413 30.5
Lsat_1_v5_gn_7_103061 Lactuca sativa HOM05D006105 ORTHO05D006345 7.1e-22 109.4 436 32.3
TAR627G0886 Trochodendron aralioides HOM05D000157 ORTHO05D006345 9.3e-22 109.0 228 40.8
Glyma.06G232800 Glycine max HOM05D006105 ORTHO05D006345 1.0e-20 105.5 484 29.1
Aqoxy4G00493 Aquilegia oxysepala HOM05D006105 ORTHO05D006345 2.5e-19 100.9 397 29.7
GSVIVG01021165001 Vitis vinifera HOM05D006105 ORTHO05D006345 1.6e-18 98.2 425 29.2
Manes.16G035200 Manihot esculenta HOM05D013066 ORTHO05D006345 3.6e-18 97.1 415 30.1
PGR083G1480 Punica granatum HOM05D006105 ORTHO05D006345 8.1e-18 95.9 421 30.9
Psat5g240600 Pisum sativum HOM05D006105 ORTHO05D006345 2.4e-17 94.4 278 34.9
CANSAT35G1552 Cannabis sativa HOM05D006105 ORTHO05D006345 5.3e-17 93.2 410 29.8
Solyc10g007156.2 Solanum lycopersicum HOM05D016660 ORTHO05D006345 3.4e-16 90.5 185 37.3
Gohir.A13G148200 Gossypium hirsutum HOM05D006105 ORTHO05D006345 1.1e-14 85.5 278 36.0
Oeu051102.1 Olea europaea HOM05D006105 ORTHO05D006345 3.2e-14 84.0 123 42.3
ATR0602G093 Amborella trichopoda HOM05D006105 ORTHO05D006345 5.1e-12 76.6 378 27.8
Migut.H01972 Erythranthe guttata HOM05D006105 ORTHO05D006345 1.1e-11 75.5 191 34.6
PGSC0003DMG400044967 Solanum tuberosum HOM05D016660 ORTHO05D006345 3.3e-11 73.9 391 26.1
Thecc.06G176400 Theobroma cacao HOM05D013066 ORTHO05D010890 4.0e-09 67.0 447 26.8
Sopen10g003360 Solanum pennellii HOM05D016660 ORTHO05D006345 5.3e-09 66.6 391 25.6
Sopen10g003370 Solanum pennellii HOM05D016660 ORTHO05D006345 6.9e-09 66.2 391 26.6
MBI06_g40465_MAGBIO Magnolia biondii HOM05D026394 ORTHO05D030051 9.0e-09 65.9 81 51.9
MBI06_g46086_MAGBIO Magnolia biondii HOM05D026394 ORTHO05D030051 1.5e-08 65.1 91 49.5
HanXRQChr17g0545011 Helianthus annuus HOM05D006105 ORTHO05D006345 2.0e-08 64.7 187 33.7
SEGI_16969 Sequoiadendron giganteum HOM05D016559 ORTHO05D019650 2.0e-08 64.7 294 29.9
SGA_v2.0_scaffold130G34335 Striga asiatica HOM05D006105 ORTHO05D006345 3.4e-08 63.9 184 33.7
Gohir.D05G159900 Gossypium hirsutum HOM05D013066 ORTHO05D010890 4.5e-08 63.5 423 27.9
arahy.Tifrunner.gnm1.ann1.81KKWU Arachis hypogaea HOM05D009670 ORTHO05D010890 2.2e-07 61.2 273 28.9
Glyma.15G079800 Glycine max HOM05D009670 ORTHO05D010890 2.9e-07 60.8 424 26.9
arahy.Tifrunner.gnm1.ann1.33PIHY Arachis hypogaea HOM05D009670 ORTHO05D010890 3.8e-07 60.5 273 28.9
Potri.004G052900 Populus trichocarpa HOM05D058718 ORTHO05D010890 4.9e-07 60.1 425 24.0
CiPaw.09G066800 Carya illinoinensis HOM05D009670 ORTHO05D010890 1.4e-06 58.5 453 28.5
Gohir.A05G157001 Gossypium hirsutum HOM05D013066 ORTHO05D010890 1.9e-06 58.2 344 28.2
Gorai.009G164800 Gossypium raimondii HOM05D013066 ORTHO05D010890 3.2e-06 57.4 421 27.3
MBI06_g25724_MAGBIO Magnolia biondii HOM05D026394 ORTHO05D030051 3.2e-06 57.4 60 60.0
PGSC0003DMG400021274 Solanum tuberosum HOM05D016660 ORTHO05D006345 3.2e-06 57.4 382 24.1


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