Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022077 Camellia sinensis var. sinensis HOM05D026507 ORTHO05D000067 2.0e-98 362.5 188 100.0
CSS0029295 Camellia sinensis var. sinensis HOM05D026507 ORTHO05D110613 2.7e-71 272.3 189 77.8
CSS0001394 Camellia sinensis var. sinensis HOM05D026507 ORTHO05D000067 1.5e-69 266.5 184 76.1
CSS0041762 Camellia sinensis var. sinensis HOM05D026507 ORTHO05D000067 2.6e-69 265.8 192 77.6
CSS0011546 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 7.8e-58 227.6 291 51.9
CSS0016639 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 3.6e-55 218.8 291 50.5
CSS0021123 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.7e-52 209.9 291 49.1
CSS0035306 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 6.2e-47 191.4 270 48.5
CSS0018197 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.3e-46 189.5 291 47.1
CSS0041074 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 6.6e-25 118.2 269 37.9
CSS0020853 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.4e-22 109.8 299 32.1
Rhsim05G0213300 Rhododendron simsii HOM05D000045 ORTHO05D000067 3.4e-21 105.9 294 31.3
CSS0002394 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 9.9e-13 77.8 227 30.4
CSS0017425 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.7e-12 77.0 215 31.6
Rhsim01G0226000 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.7e-12 77.0 89 49.4
CSS0045912 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.2e-12 76.6 215 31.6
CSS0043688 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.9e-11 73.6 298 27.9
CSS0006298 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 3.2e-11 72.8 318 27.7
CSS0047046 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 3.2e-11 72.8 298 27.5
CSS0024514 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 7.1e-11 71.6 297 25.6
CSS0007642 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.6e-10 70.5 298 27.2
CSS0008128 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 3.5e-10 69.3 122 34.4
CSS0024954 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 6.0e-10 68.6 122 34.4
CSS0035044 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 7.9e-10 68.2 122 34.4
FvH4_7g13761 Fragaria vesca HOM05D000045 ORTHO05D000067 7.9e-10 68.2 89 40.4
CSS0041777 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.3e-09 67.4 87 46.0
CSS0046475 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.3e-09 66.6 302 25.5
Atru.chr3.3093 Acer truncatum HOM05D000045 ORTHO05D000067 3.0e-09 66.2 310 24.2
CSS0024773 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 3.0e-09 66.2 87 44.8
CSS0046621 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 3.9e-09 65.9 122 32.8
FvH4_3g31442 Fragaria vesca HOM05D000045 ORTHO05D000067 5.1e-09 65.5 293 27.0
CSS0008641 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 6.7e-09 65.1 299 25.4
CSS0040930 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.9e-08 63.5 302 25.2
Ciclev10003358m.g Citrus clementina HOM05D000045 ORTHO05D000067 1.9e-08 63.5 92 41.3
CSS0017444 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.5e-08 63.2 89 40.4
TAR245G0006 Trochodendron aralioides HOM05D000045 ORTHO05D000067 1.3e-07 60.8 89 38.2
Atru.chr8.1689 Acer truncatum HOM05D000045 ORTHO05D000067 1.6e-07 60.5 88 40.9
Psat5g221600 Pisum sativum HOM05D000045 ORTHO05D000067 1.6e-07 60.5 145 32.4
Ciclev10030151m.g Citrus clementina HOM05D000045 ORTHO05D000067 2.1e-07 60.1 108 34.3
CSS0025634 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D004773 3.7e-07 59.3 258 26.0
CSS0037911 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D004773 3.7e-07 59.3 258 26.0
CSS0006434 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D004773 4.8e-07 58.9 258 26.0
CSS0021643 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D004773 4.8e-07 58.9 258 26.0
CSS0024962 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D004773 4.8e-07 58.9 258 26.0
CSS0035229 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D004773 8.1e-07 58.2 258 26.0
RhsimUnG0130200 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.1e-06 57.8 81 42.0
TPR.G28050 Trifolium pratense HOM05D000045 ORTHO05D000001 1.1e-06 57.8 83 43.4
FvH4_4g06832 Fragaria vesca HOM05D000045 ORTHO05D000067 1.4e-06 57.4 87 37.9


User provided reference genes

Program Settings