Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022052 Camellia sinensis var. sinensis HOM05D005913 ORTHO05D007138 3.1e-139 498.4 251 100.0
CSS0006724 Camellia sinensis var. sinensis HOM05D005913 ORTHO05D007138 2.0e-133 479.2 242 100.0
Hma1.2p1_1287F.1_g273300 Hydrangea macrophylla HOM05D005913 ORTHO05D007138 1.8e-102 376.3 239 80.8
Dinv28648 Davidia involucrata HOM05D005913 ORTHO05D007138 7.6e-101 370.9 237 79.7
vmacro14595 Vaccinium macrocarpon HOM05D005913 ORTHO05D007138 7.8e-98 360.9 235 77.9
Rhsim01G0236700 Rhododendron simsii HOM05D005913 ORTHO05D007138 1.3e-97 360.1 236 78.4
Oeu008301.1 Olea europaea HOM05D005913 ORTHO05D007138 7.3e-96 354.4 230 77.0
Peaxi162Scf00228g00514 Petunia axillaris HOM05D000044 ORTHO05D007138 6.2e-95 351.3 227 76.2
TAR633G1775 Trochodendron aralioides HOM05D005913 ORTHO05D007138 1.4e-94 350.1 227 77.5
Nitab4.5_0000037g0040 Nicotiana tabacum HOM05D005913 ORTHO05D007138 4.0e-94 348.6 235 74.5
Dinv25093 Davidia involucrata HOM05D005913 ORTHO05D007138 4.4e-93 345.1 229 77.7
Sopen10g034140 Solanum pennellii HOM05D005913 ORTHO05D007138 7.1e-91 337.8 234 72.6
PGSC0003DMG400016288 Solanum tuberosum HOM05D005913 ORTHO05D007138 7.1e-91 337.8 234 72.6
Solyc10g084700.2 Solanum lycopersicum HOM05D005913 ORTHO05D007138 2.1e-90 336.3 234 72.2
CAN.G324.3 Capsicum annuum HOM05D005913 ORTHO05D007138 2.7e-90 335.9 227 73.1
QL05p072708 Quercus lobata HOM05D005913 ORTHO05D007138 3.5e-90 335.5 236 73.3
Sc21g0006400 Simmondsia chinensis HOM05D005913 ORTHO05D007138 4.6e-90 335.1 239 72.8
PGSC0003DMG402011001 Solanum tuberosum HOM05D005913 ORTHO05D007138 1.0e-89 334.0 234 71.8
Nn2g15825 Nelumbo nucifera HOM05D005913 ORTHO05D007138 2.3e-89 332.8 222 76.1
MSTRG.24154 Avicennia marina HOM05D005913 ORTHO05D007138 8.7e-89 330.9 232 73.3
Sc21g0006380 Simmondsia chinensis HOM05D005913 ORTHO05D007138 1.9e-88 329.7 239 72.4
GSVIVG01024730001 Vitis vinifera HOM05D005913 ORTHO05D007138 9.6e-88 327.4 242 70.2
TWI31G0765 Tripterygium wilfordii HOM05D005913 ORTHO05D007138 5.3e-86 321.6 229 71.2
CiPaw.13G076700 Carya illinoinensis HOM05D005913 ORTHO05D007138 9.0e-86 320.9 236 69.9
Lj3A585T46 Lonicera japonica HOM05D005913 ORTHO05D007138 9.9e-85 317.4 224 74.6
Lsat_1_v5_gn_9_20000 Lactuca sativa HOM05D005913 ORTHO05D007138 4.9e-84 315.1 221 72.4
MD11G1073200 Malus domestica HOM05D005913 ORTHO05D007138 3.2e-83 312.4 247 68.0
SGA_v2.0_scaffold25G11107 Striga asiatica HOM05D005913 ORTHO05D007138 7.1e-83 311.2 232 68.5
ECA247G1367 Erigeron canadensis HOM05D005913 ORTHO05D007138 2.7e-82 309.3 224 69.2
Duzib150G0854 Durio zibethinus HOM05D005913 ORTHO05D007138 2.3e-81 306.2 230 69.1
Peaxi162Scf00384g00045 Petunia axillaris HOM05D005913 ORTHO05D007138 2.1e-79 299.7 218 68.3
Migut.N03298 Erythranthe guttata HOM05D005913 ORTHO05D007138 2.8e-79 299.3 230 66.5
Thecc.09G300200 Theobroma cacao HOM05D005913 ORTHO05D007138 4.8e-79 298.5 227 67.4
CANSAT56G2716 Cannabis sativa HOM05D005913 ORTHO05D007138 1.1e-78 297.4 222 69.4
Cfa011705 Carpinus fangiana HOM05D005913 ORTHO05D007138 1.8e-78 296.6 241 64.3
TAR369G0609 Trochodendron aralioides HOM05D005913 ORTHO05D007138 6.9e-78 294.7 208 70.7
Prupe.6G056500 Prunus persica HOM05D005913 ORTHO05D007138 9.0e-78 294.3 236 65.7
Cc01_g14290 Coffea canephora HOM05D005913 ORTHO05D007138 1.2e-77 293.9 223 68.6
Eucgr.J01039 Eucalyptus grandis HOM05D005913 ORTHO05D007138 1.2e-77 293.9 219 68.9
HanXRQChr16g0518331 Helianthus annuus HOM05D005913 ORTHO05D007138 5.8e-77 291.6 227 65.6
FAN11G0587 Fragaria x ananassa HOM05D005913 ORTHO05D007138 3.8e-76 288.9 221 67.0
FvH4_3g38720 Fragaria vesca HOM05D005913 ORTHO05D007138 1.1e-75 287.3 221 66.5
Actinidia16099 Actinidia chinensis HOM05D005913 ORTHO05D007138 1.4e-75 287.0 179 80.4
MELO3C025845.2 Cucumis melo HOM05D005913 ORTHO05D007138 1.4e-75 287.0 243 62.6
Lalb_Chr19g0128221 Lupinus albus HOM05D005913 ORTHO05D007138 3.2e-75 285.8 239 63.2
Haze_24336 Corylus avellana HOM05D005913 ORTHO05D007138 5.5e-75 285.0 263 58.9
FAN25G2063 Fragaria x ananassa HOM05D005913 ORTHO05D007138 9.3e-75 284.3 221 65.6
CsaV3_6G016190 Cucumis sativus L. HOM05D005913 ORTHO05D007138 1.2e-74 283.9 236 62.7
Sed0020527 Sechium edule HOM05D005913 ORTHO05D007138 2.7e-74 282.7 235 62.1
Cpa.g.sc112.8 Carica papaya HOM05D005913 ORTHO05D007138 7.9e-74 281.2 233 63.9
AUR62020144 Chenopodium quinoa HOM05D005913 ORTHO05D007138 7.9e-74 281.2 223 63.7
RcHm_v2.0_Chr5g0069871 Rosa chinensis HOM05D005913 ORTHO05D007138 1.0e-73 280.8 233 63.5
FAN21G0630 Fragaria x ananassa HOM05D005913 ORTHO05D007138 2.3e-73 279.6 221 65.2
AUR62001638 Chenopodium quinoa HOM05D005913 ORTHO05D007138 5.1e-73 278.5 223 63.7
Gorai.013G259900 Gossypium raimondii HOM05D005913 ORTHO05D007138 5.1e-73 278.5 225 64.4
Hund09257 Selenicereus undatus HOM05D005913 ORTHO05D007138 6.7e-73 278.1 228 64.9
Gohir.D13G228900 Gossypium hirsutum HOM05D005913 ORTHO05D007138 1.9e-72 276.6 226 63.7
Manes.10G106300 Manihot esculenta HOM05D005913 ORTHO05D007138 2.5e-72 276.2 257 58.8
DCAR_002129 Daucus carota HOM05D005913 ORTHO05D007138 1.3e-71 273.9 240 63.3
DCAR_012499 Daucus carota HOM05D005913 ORTHO05D007138 4.8e-71 271.9 249 60.6
arahy.Tifrunner.gnm1.ann1.6RYY2X Arachis hypogaea HOM05D005913 ORTHO05D007138 3.1e-70 269.2 217 64.5
PGR044G1475 Punica granatum HOM05D005913 ORTHO05D007138 5.3e-70 268.5 222 60.8
ATR0681G105 Amborella trichopoda HOM05D005913 ORTHO05D007138 2.6e-69 266.2 224 63.4
CDE04G2145 Ceratophyllum demersum HOM05D005913 ORTHO05D007138 2.6e-69 266.2 211 67.3
PSO675G7356 Papaver somniferum HOM05D005913 ORTHO05D007138 2.6e-69 266.2 225 62.7
Ciclev10029073m.g Citrus clementina HOM05D005913 ORTHO05D007138 4.5e-69 265.4 227 64.8
FAN16G2194 Fragaria x ananassa HOM05D005913 ORTHO05D007138 4.5e-69 265.4 222 63.5
Medtr7g117410 Medicago truncatula HOM05D005913 ORTHO05D007138 1.7e-68 263.5 217 64.1
PSO801G0017 Papaver somniferum HOM05D005913 ORTHO05D007138 3.8e-68 262.3 217 63.6
PSO339G4526 Papaver somniferum HOM05D005913 ORTHO05D007138 6.5e-68 261.5 215 63.3
Psat3g002480 Pisum sativum HOM05D005913 ORTHO05D007138 1.1e-67 260.8 214 65.0
Gohir.A13G224200 Gossypium hirsutum HOM05D005913 ORTHO05D007138 1.4e-67 260.4 224 60.3
Potri.006G170500 Populus trichocarpa HOM05D005913 ORTHO05D007138 1.4e-67 260.4 225 64.9
Sabra06G0131300 Salix brachista HOM05D005913 ORTHO05D007138 1.9e-67 260.0 230 63.5
QL01p038500 Quercus lobata HOM05D005913 ORTHO05D007138 4.2e-67 258.8 183 73.2
Lj4A493T9 Lonicera japonica HOM05D005913 ORTHO05D007138 1.6e-66 256.9 230 63.0
LjContig00155g0009730 Lotus japonicus HOM05D005913 ORTHO05D007138 3.9e-65 252.3 227 61.2
Ca_09509_v3 Cicer arietinum L. HOM05D000390 ORTHO05D007138 7.4e-64 248.1 208 63.0
Ca_30058_v3 Cicer arietinum L. HOM05D000390 ORTHO05D007138 7.4e-64 248.1 208 63.0
VMungo0647G0764 Vigna mungo HOM05D005913 ORTHO05D007138 9.7e-64 247.7 221 61.5
Aqoxy4G02545 Aquilegia oxysepala HOM05D005913 ORTHO05D007138 5.3e-62 241.9 217 59.0
Phvul.001G033300 Phaseolus vulgaris HOM05D005913 ORTHO05D007138 7.7e-61 238.0 174 71.3
CDE04G2770 Ceratophyllum demersum HOM05D005913 ORTHO05D007138 1.7e-60 236.9 210 62.4
Glyma.05G235600 Glycine max HOM05D005913 ORTHO05D007138 2.9e-60 236.1 223 58.3
COL.COLO4_19170 Corchorus olitorius HOM05D005913 ORTHO05D001548 1.9e-59 233.4 211 61.6
EL10Ac7g16180 Beta vulgaris HOM05D005913 ORTHO05D007138 5.5e-59 231.9 237 54.0
HPP92_028632 Vanilla planifolia HOM05D005913 ORTHO05D007138 2.1e-58 229.9 205 61.0
Thhalv10008508m.g Eutrema salsugineum HOM05D005913 ORTHO05D007138 2.2e-55 219.9 235 53.6
Ah.15g099480 Amaranthus hybridus HOM05D005913 ORTHO05D007138 1.3e-52 210.7 217 53.0
HPP92_002930 Vanilla planifolia HOM05D005913 ORTHO05D007138 1.7e-52 210.3 211 55.9
SalBow6G3913 Salvia bowleyana HOM05D005913 ORTHO05D007138 6.5e-52 208.4 324 41.0
CARHR006930 Cardamine hirsuta HOM05D005913 ORTHO05D007138 9.4e-51 204.5 209 55.0
A10p05770 Brassica napus HOM05D005913 ORTHO05D007138 4.7e-50 202.2 214 55.1
BraA10t42838Z Brassica rapa HOM05D005913 ORTHO05D007138 4.7e-50 202.2 214 55.1
C05p05290 Brassica napus HOM05D005913 ORTHO05D007138 6.1e-50 201.8 214 55.1
BolC5t29300H Brassica oleracea HOM05D005913 ORTHO05D007138 6.1e-50 201.8 214 55.1
Sp1g05970 Schrenkiella parvula HOM05D005913 ORTHO05D007138 3.0e-49 199.5 234 50.0
Aa31LG1G6450 Aethionema arabicum HOM05D005913 ORTHO05D007138 6.7e-49 198.4 232 50.0
Carub.0001s0651 Capsella rubella HOM05D005913 ORTHO05D007138 2.6e-48 196.4 235 50.2
AT1G07210 Arabidopsis thaliana HOM05D005913 ORTHO05D007138 4.4e-48 195.7 242 49.2
C08p50760 Brassica napus HOM05D005913 ORTHO05D007138 5.7e-48 195.3 220 52.3
BolC8t52604H Brassica oleracea HOM05D005913 ORTHO05D007138 5.7e-48 195.3 220 52.3
AL1G17350 Arabidopsis lyrata HOM05D005913 ORTHO05D007138 9.7e-48 194.5 242 48.8
BcaC07g42020 Brassica carinata HOM05D005913 ORTHO05D007138 2.8e-47 193.0 220 51.8
BraA09t41996Z Brassica rapa HOM05D005913 ORTHO05D007138 8.2e-47 191.4 206 52.9
A09p66580 Brassica napus HOM05D005913 ORTHO05D007138 1.1e-46 191.0 228 50.4
Os10g0500500 Oryza sativa ssp. japonica HOM05D005913 ORTHO05D007138 1.4e-46 190.7 217 51.2
Zm00001eb012770 Zea mays HOM05D005913 ORTHO05D007138 2.2e-44 183.3 251 46.2
unitig_26.g9973 Utricularia gibba HOM05D005913 ORTHO05D007138 4.2e-43 179.1 122 73.8
BcaC07g42452 Brassica carinata HOM05D005913 ORTHO05D007138 3.6e-42 176.0 164 56.7
Zm00001eb142300 Zea mays HOM05D005913 ORTHO05D007138 6.7e-41 171.8 163 58.3
TPR.G37238 Trifolium pratense HOM05D005913 ORTHO05D007138 2.8e-39 166.4 186 53.2
MD03G1068700 Malus domestica HOM05D005913 ORTHO05D007138 4.1e-38 162.5 101 81.2
BcaB07g33371 Brassica carinata HOM05D005913 ORTHO05D007138 2.0e-32 143.7 165 49.7
BcaC07g42451 Brassica carinata HOM05D005913 ORTHO05D007138 4.4e-32 142.5 105 66.7
ClCG02G019520 Citrullus lanatus HOM05D005913 ORTHO05D007138 8.3e-31 138.3 124 54.8
Atru.chr3.4201 Acer truncatum HOM05D005913 ORTHO05D007138 1.4e-30 137.5 142 50.7
MD03G1068600 Malus domestica HOM05D005913 ORTHO05D007138 2.7e-29 133.3 135 56.3
SEGI_23907 Sequoiadendron giganteum HOM05D005913 ORTHO05D007138 1.0e-28 131.3 153 51.0
TPR.G4738 Trifolium pratense HOM05D005913 ORTHO05D007138 1.1e-27 127.9 144 48.6
arahy.Tifrunner.gnm1.ann1.6CR394 Arachis hypogaea HOM05D005913 ORTHO05D007138 6.8e-25 118.6 84 71.4
TPR.G3936 Trifolium pratense HOM05D005913 ORTHO05D007138 1.5e-24 117.5 70 82.9
Pp3c9_1670 Physcomitrium patens HOM05D005913 ORTHO05D007138 9.8e-24 114.8 214 39.3
Mapoly0046s0093 Marchantia polymorpha HOM05D005913 ORTHO05D007138 1.1e-22 111.3 207 38.2
SEGI_13957 Sequoiadendron giganteum HOM05D005913 ORTHO05D007138 4.1e-22 109.4 72 76.4
AagrBONN_evm.TU.Sc2ySwM_362.942 Anthoceros agrestis HOM05D005913 ORTHO05D007138 3.5e-21 106.3 213 36.6
Atru.chr3.4202 Acer truncatum HOM05D005913 ORTHO05D007138 1.4e-17 94.4 55 83.6
Solyc01g058530.4 Solanum lycopersicum HOM05D005913 ORTHO05D007138 2.0e-16 90.5 63 69.8
Peaxi162Scf00378g00212 Petunia axillaris HOM05D000011 ORTHO05D010520 8.3e-15 85.1 48 91.7
SHI19145 Sapria himalayana HOM05D000002 ORTHO05D000001 5.4e-14 82.4 112 42.0
TPR.G39004 Trifolium pratense HOM05D006629 ORTHO05D008430 2.5e-11 73.6 105 41.9
CBR_g41534 Chara braunii HOM05D005913 ORTHO05D007138 3.6e-10 69.7 66 53.0


User provided reference genes

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