Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022034 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 1.3e-51 206.1 101 100.0
CSS0036054 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 2.8e-38 161.8 102 85.3
RhsimUnG0119200 Rhododendron simsii HOM05D007368 ORTHO05D009330 1.9e-34 149.1 88 85.2
vmacro20068 Vaccinium macrocarpon HOM05D007368 ORTHO05D009330 3.2e-34 148.3 88 85.2
CSS0023324 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 6.1e-33 144.1 88 80.7
Atru.chr8.2541 Acer truncatum HOM05D007368 ORTHO05D009330 7.9e-33 143.7 88 80.7
GSVIVG01025542001 Vitis vinifera HOM05D007368 ORTHO05D009330 1.0e-32 143.3 88 78.4
AUR62002707 Chenopodium quinoa HOM05D007368 ORTHO05D009330 1.3e-32 142.9 91 79.1
ClCG10G020660 Citrullus lanatus HOM05D007368 ORTHO05D009330 1.8e-32 142.5 86 81.4
Eucgr.A01185 Eucalyptus grandis HOM05D007368 ORTHO05D009330 1.8e-32 142.5 88 80.7
EL10Ac7g17332 Beta vulgaris HOM05D007368 ORTHO05D009330 2.3e-32 142.1 88 78.4
Manes.08G002100 Manihot esculenta HOM05D007368 ORTHO05D009330 3.0e-32 141.7 88 79.5
TWI18G0236 Tripterygium wilfordii HOM05D007368 ORTHO05D009330 3.0e-32 141.7 88 77.3
CsaV3_3G035440 Cucumis sativus L. HOM05D007368 ORTHO05D009330 3.9e-32 141.4 92 76.1
QL07p045528 Quercus lobata HOM05D007368 ORTHO05D009330 3.9e-32 141.4 87 80.5
PGR004G1717 Punica granatum HOM05D007368 ORTHO05D009330 8.7e-32 140.2 86 79.1
Haze_20668 Corylus avellana HOM05D007368 ORTHO05D009330 1.1e-31 139.8 88 78.4
Lsat_1_v5_gn_2_109820 Lactuca sativa HOM05D007368 ORTHO05D009330 1.1e-31 139.8 90 78.9
HanXRQChr07g0195701 Helianthus annuus HOM05D007368 ORTHO05D009330 1.5e-31 139.4 90 76.7
Aqoxy4G03165 Aquilegia oxysepala HOM05D007368 ORTHO05D009330 1.9e-31 139.0 87 77.0
SalBow4G2292 Salvia bowleyana HOM05D007368 ORTHO05D009330 2.5e-31 138.7 94 75.5
MELO3C009303.2 Cucumis melo HOM05D007368 ORTHO05D009330 3.3e-31 138.3 92 75.0
Nn2g10623 Nelumbo nucifera HOM05D007368 ORTHO05D009330 3.3e-31 138.3 94 70.2
Ciclev10013048m.g Citrus clementina HOM05D007368 ORTHO05D009330 4.3e-31 137.9 88 79.5
CANSAT80G2753 Cannabis sativa HOM05D007368 ORTHO05D009330 5.7e-31 137.5 90 77.8
Cfa017494 Carpinus fangiana HOM05D007368 ORTHO05D009330 5.7e-31 137.5 88 77.3
Migut.L01655 Erythranthe guttata HOM05D007368 ORTHO05D009330 5.7e-31 137.5 88 77.3
Sc20g0004140 Simmondsia chinensis HOM05D007368 ORTHO05D009330 7.4e-31 137.1 89 77.5
SGA_v2.0_scaffold35G14174 Striga asiatica HOM05D007368 ORTHO05D009330 9.7e-31 136.7 88 76.1
TAR623G0445 Trochodendron aralioides HOM05D007368 ORTHO05D009330 9.7e-31 136.7 88 75.0
PSO384G2936 Papaver somniferum HOM05D007368 ORTHO05D009330 1.6e-30 136.0 88 72.7
Potri.016G084000 Populus trichocarpa HOM05D007368 ORTHO05D009330 2.2e-30 135.6 88 76.1
Lj1g0027781 Lotus japonicus HOM05D007368 ORTHO05D009330 2.8e-30 135.2 86 75.6
Thecc.05G052500 Theobroma cacao HOM05D007368 ORTHO05D009330 3.7e-30 134.8 88 76.1
Gohir.A04G077000 Gossypium hirsutum HOM05D007368 ORTHO05D009330 4.8e-30 134.4 88 76.1
Gohir.D04G116100 Gossypium hirsutum HOM05D007368 ORTHO05D009330 4.8e-30 134.4 88 76.1
Gorai.009G420700 Gossypium raimondii HOM05D007368 ORTHO05D009330 4.8e-30 134.4 88 76.1
Peaxi162Scf00005g05110 Petunia axillaris HOM05D007368 ORTHO05D009330 6.3e-30 134.0 91 75.8
Prupe.6G242800 Prunus persica HOM05D007368 ORTHO05D009330 1.4e-29 132.9 93 73.1
Os03g0285100 Oryza sativa ssp. japonica HOM05D007368 ORTHO05D009330 1.8e-29 132.5 86 75.6
Nitab4.5_0000848g0200 Nicotiana tabacum HOM05D007368 ORTHO05D009330 2.4e-29 132.1 94 71.3
MBI05_g24570_MAGBIO Magnolia biondii HOM05D007368 ORTHO05D009330 4.1e-29 131.3 94 68.1
PSO339G6044 Papaver somniferum HOM05D007368 ORTHO05D009330 5.3e-29 131.0 86 72.1
Duzib106G0389 Durio zibethinus HOM05D007368 ORTHO05D009330 9.0e-29 130.2 85 75.3
Lalb_Chr01g0019071 Lupinus albus HOM05D007368 ORTHO05D009330 9.0e-29 130.2 88 72.7
FvH4_6g15150 Fragaria vesca HOM05D007368 ORTHO05D009330 1.2e-28 129.8 87 75.9
FAN02G4571 Fragaria x ananassa HOM05D007368 ORTHO05D009330 1.2e-28 129.8 87 75.9
FAN05G3151 Fragaria x ananassa HOM05D007368 ORTHO05D009330 1.2e-28 129.8 87 75.9
FAN09G3524 Fragaria x ananassa HOM05D007368 ORTHO05D009330 1.2e-28 129.8 87 75.9
FAN14G0355 Fragaria x ananassa HOM05D007368 ORTHO05D009330 1.2e-28 129.8 87 75.9
Nitab4.5_0006316g0030 Nicotiana tabacum HOM05D007368 ORTHO05D009330 1.5e-28 129.4 94 71.3
Medtr7g061255 Medicago truncatula HOM05D007368 ORTHO05D009330 2.6e-28 128.6 86 72.1
Medtr7g100570 Medicago truncatula HOM05D007368 ORTHO05D009330 2.6e-28 128.6 86 72.1
RcHm_v2.0_Chr3g0468451 Rosa chinensis HOM05D007368 ORTHO05D009330 3.4e-28 128.3 90 73.3
Sabra16G0091100 Salix brachista HOM05D007368 ORTHO05D009330 4.5e-28 127.9 88 71.6
MD12G1126200 Malus domestica HOM05D007368 ORTHO05D009330 1.3e-27 126.3 93 74.2
Aa31LG10G9720 Aethionema arabicum HOM05D007368 ORTHO05D009330 1.7e-27 125.9 88 72.7
Cc06_g03400 Coffea canephora HOM05D007368 ORTHO05D009330 2.9e-27 125.2 88 72.7
Thhalv10010814m.g Eutrema salsugineum HOM05D007368 ORTHO05D009330 2.9e-27 125.2 88 72.7
Psat3g046880 Pisum sativum HOM05D007368 ORTHO05D009330 2.9e-27 125.2 86 69.8
Carub.0005s2004 Capsella rubella HOM05D007368 ORTHO05D009330 3.8e-27 124.8 86 73.3
Glyma.03G177200 Glycine max HOM05D007368 ORTHO05D009330 5.0e-27 124.4 88 73.9
Sp5g08870 Schrenkiella parvula HOM05D007368 ORTHO05D009330 5.0e-27 124.4 100 67.0
THA.LOC104806520 Tarenaya hassleriana HOM05D007368 ORTHO05D009330 5.0e-27 124.4 88 71.6
Zm00001eb013060 Zea mays HOM05D007368 ORTHO05D009330 1.1e-26 123.2 90 67.8
BcaC07g39711 Brassica carinata HOM05D007368 ORTHO05D009330 1.4e-26 122.9 98 67.3
A09p46480 Brassica napus HOM05D007368 ORTHO05D009330 1.4e-26 122.9 98 67.3
C08p28830 Brassica napus HOM05D007368 ORTHO05D009330 1.4e-26 122.9 98 67.3
BolC8t50485H Brassica oleracea HOM05D007368 ORTHO05D009330 1.9e-26 122.5 88 71.6
BraA09t40112Z Brassica rapa HOM05D007368 ORTHO05D009330 1.9e-26 122.5 88 71.6
CARHR163370 Cardamine hirsuta HOM05D007368 ORTHO05D009330 2.5e-26 122.1 86 72.1
VMungo1383G1325 Vigna mungo HOM05D007368 ORTHO05D009330 2.5e-26 122.1 86 73.3
A07p02830 Brassica napus HOM05D007368 ORTHO05D009330 3.2e-26 121.7 86 72.1
BraA07t28082Z Brassica rapa HOM05D007368 ORTHO05D009330 3.2e-26 121.7 86 72.1
AL5G34390 Arabidopsis lyrata HOM05D007368 ORTHO05D009330 4.2e-26 121.3 88 70.5
AT3G53470 Arabidopsis thaliana HOM05D007368 ORTHO05D009330 4.2e-26 121.3 88 70.5
Zm00001eb039440 Zea mays HOM05D007368 ORTHO05D009330 4.2e-26 121.3 87 67.8
Zm00001eb039470 Zea mays HOM05D007368 ORTHO05D009330 4.2e-26 121.3 87 67.8
Glyma.19G177900 Glycine max HOM05D007368 ORTHO05D009330 5.5e-26 120.9 88 71.6
Phvul.001G174100 Phaseolus vulgaris HOM05D007368 ORTHO05D009330 7.2e-26 120.6 88 71.6
Zm00001eb039540 Zea mays HOM05D007368 ORTHO05D009330 7.2e-26 120.6 87 67.8
BcaB01g00269 Brassica carinata HOM05D007368 ORTHO05D009330 2.1e-25 119.0 86 70.9
Cpa.g.sc114.58 Carica papaya HOM05D007368 ORTHO05D009330 2.1e-25 119.0 71 78.9
CDE07G1273 Ceratophyllum demersum HOM05D007368 ORTHO05D009330 7.9e-25 117.1 86 61.6
AUR62030166 Chenopodium quinoa HOM05D007368 ORTHO05D009330 1.1e-23 113.2 66 80.3
arahy.Tifrunner.gnm1.ann1.FER711 Arachis hypogaea HOM05D007368 ORTHO05D009330 1.7e-22 109.4 72 72.2
Dinv37241 Davidia involucrata HOM05D007368 ORTHO05D009330 2.2e-22 109.0 63 77.8
HPP92_003604 Vanilla planifolia HOM05D007368 ORTHO05D009330 4.8e-22 107.8 94 59.6
arahy.Tifrunner.gnm1.ann1.XWNT9U Arachis hypogaea HOM05D007368 ORTHO05D009330 6.3e-22 107.5 68 72.1
Sopen09g002110 Solanum pennellii HOM05D007368 ORTHO05D009330 1.4e-21 106.3 84 69.0
BcaC03g13096 Brassica carinata HOM05D007368 ORTHO05D009330 2.4e-21 105.5 80 67.5
BolC2t05999H Brassica oleracea HOM05D007368 ORTHO05D009330 2.4e-21 105.5 80 67.5
Solyc09g007240.3 Solanum lycopersicum HOM05D007368 ORTHO05D009330 5.3e-21 104.4 83 68.7
Actinidia11231 Actinidia chinensis HOM05D007368 ORTHO05D009330 2.6e-20 102.1 69 69.6
SEGI_06625 Sequoiadendron giganteum HOM05D007368 ORTHO05D009330 1.0e-19 100.1 81 58.0
Sed0014476 Sechium edule HOM05D007368 ORTHO05D009330 3.2e-18 95.1 91 58.2
ECA238G4406 Erigeron canadensis HOM05D001465 ORTHO05D001434 4.8e-14 81.3 47 76.6
Mapoly0019s0018 Marchantia polymorpha HOM05D007368 ORTHO05D009330 4.1e-13 78.2 82 50.0
Pp3c5_6130 Physcomitrium patens HOM05D007368 ORTHO05D009330 1.5e-10 69.7 92 42.4
TAR369G0858 Trochodendron aralioides HOM05D000391 ORTHO05D011523 4.0e-08 61.6 46 58.7
SMO180G0004 Selaginella moellendorffii HOM05D007368 ORTHO05D009330 6.7e-08 60.8 80 40.0


User provided reference genes

Program Settings