Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0022002 Camellia sinensis var. sinensis HOM05D002897 ORTHO05D008718 1.6e-135 486.1 252 100.0
Actinidia09731 Actinidia chinensis HOM05D002897 ORTHO05D008718 3.8e-108 395.2 252 81.3
Rhsim06G0166000 Rhododendron simsii HOM05D002897 ORTHO05D008718 6.6e-105 384.4 263 76.0
vmacro12177 Vaccinium macrocarpon HOM05D002897 ORTHO05D008718 1.9e-104 382.9 252 80.6
Hma1.2p1_2044F.1_g312350 Hydrangea macrophylla HOM05D002897 ORTHO05D008718 4.6e-98 361.7 257 74.7
Dinv39736 Davidia involucrata HOM05D002897 ORTHO05D008718 3.1e-94 349.0 254 74.4
Cpa.g.sc132.3 Carica papaya HOM05D002897 ORTHO05D008718 4.0e-94 348.6 253 73.1
TAR624G0001 Trochodendron aralioides HOM05D002897 ORTHO05D008718 3.4e-93 345.5 252 72.6
Cfa014332 Carpinus fangiana HOM05D002897 ORTHO05D008718 1.7e-92 343.2 257 72.8
Duzib138G1172 Durio zibethinus HOM05D002897 ORTHO05D008718 2.9e-92 342.4 247 72.1
Nn1g07262 Nelumbo nucifera HOM05D002897 ORTHO05D008718 4.9e-92 341.7 256 69.9
Solyc07g049200.4 Solanum lycopersicum HOM05D002897 ORTHO05D008718 4.9e-92 341.7 255 71.0
Gorai.007G171100 Gossypium raimondii HOM05D002897 ORTHO05D008718 1.1e-91 340.5 253 69.6
PGSC0003DMG400000696 Solanum tuberosum HOM05D002897 ORTHO05D008718 1.1e-91 340.5 255 70.2
Gohir.D11G160500 Gossypium hirsutum HOM05D002897 ORTHO05D008718 3.2e-91 339.0 253 69.2
HanXRQChr12g0373611 Helianthus annuus HOM05D002897 ORTHO05D008718 3.2e-91 339.0 250 70.0
ECA234G1553 Erigeron canadensis HOM05D002897 ORTHO05D008718 4.2e-91 338.6 251 69.7
Lsat_1_v5_gn_5_123640 Lactuca sativa HOM05D002897 ORTHO05D008718 4.2e-91 338.6 254 67.3
Nitab4.5_0012091g0010 Nicotiana tabacum HOM05D002897 ORTHO05D008718 9.3e-91 337.4 250 70.4
Manes.13G067751 Manihot esculenta HOM05D002897 ORTHO05D008718 1.2e-90 337.0 256 69.5
CiPaw.03G157200 Carya illinoinensis HOM05D002897 ORTHO05D008718 2.1e-90 336.3 256 69.1
Manes.13G067750 Manihot esculenta HOM05D002897 ORTHO05D008718 2.7e-90 335.9 256 69.1
Peaxi162Scf00921g00023 Petunia axillaris HOM05D002897 ORTHO05D008718 3.5e-90 335.5 260 68.8
Sopen07g025210 Solanum pennellii HOM05D002897 ORTHO05D008718 3.5e-90 335.5 254 69.7
GSVIVG01030483001 Vitis vinifera HOM05D002897 ORTHO05D008718 3.5e-90 335.5 254 70.1
Thecc.01G180000 Theobroma cacao HOM05D002897 ORTHO05D008718 4.6e-90 335.1 253 69.6
TWI18G1283 Tripterygium wilfordii HOM05D002897 ORTHO05D008718 1.5e-88 330.1 258 68.2
Gohir.A11G153700 Gossypium hirsutum HOM05D002897 ORTHO05D008718 2.5e-88 329.3 253 68.0
Potri.014G156700 Populus trichocarpa HOM05D002897 ORTHO05D008718 2.5e-88 329.3 257 68.5
ClCG02G002140 Citrullus lanatus HOM05D002897 ORTHO05D008718 4.8e-87 325.1 258 66.7
Haze_12787 Corylus avellana HOM05D002897 ORTHO05D008718 1.1e-86 323.9 277 65.0
Nitab4.5_0000482g0070 Nicotiana tabacum HOM05D002897 ORTHO05D008718 3.1e-86 322.4 255 67.5
Oeu051891.2 Olea europaea HOM05D002897 ORTHO05D008718 3.1e-86 322.4 283 64.0
RcHm_v2.0_Chr2g0158471 Rosa chinensis HOM05D002897 ORTHO05D008718 4.0e-86 322.0 257 65.4
Sabra14G0118500 Salix brachista HOM05D002897 ORTHO05D008718 5.3e-86 321.6 255 66.7
Sed0013072 Sechium edule HOM05D002897 ORTHO05D008718 1.5e-85 320.1 254 66.9
Prupe.3G212700 Prunus persica HOM05D002897 ORTHO05D008718 3.4e-85 318.9 259 67.6
Hma1.2p1_1986F.1_g310090 Hydrangea macrophylla HOM05D002897 ORTHO05D008718 7.6e-85 317.8 213 75.6
Ciclev10016301m.g Citrus clementina HOM05D002897 ORTHO05D008718 1.0e-84 317.4 259 66.4
MELO3C018838.2 Cucumis melo HOM05D002897 ORTHO05D008718 2.2e-84 316.2 258 65.1
SGA_v2.0_scaffold49G18345 Striga asiatica HOM05D002897 ORTHO05D008718 4.9e-84 315.1 259 63.7
MSTRG.14141 Avicennia marina HOM05D002897 ORTHO05D008718 1.9e-83 313.2 262 64.5
FAN05G4893 Fragaria x ananassa HOM05D002897 ORTHO05D008718 5.5e-83 311.6 255 64.3
QL08p031170 Quercus lobata HOM05D002897 ORTHO05D008718 7.1e-83 311.2 256 63.3
FAN02G2770 Fragaria x ananassa HOM05D002897 ORTHO05D008718 1.6e-82 310.1 255 64.3
Atru.chr6.3235 Acer truncatum HOM05D002897 ORTHO05D008718 2.1e-82 309.7 254 66.9
CsaV3_7G003360 Cucumis sativus L. HOM05D002897 ORTHO05D008718 4.6e-82 308.5 257 63.4
FvH4_6g42620 Fragaria vesca HOM05D002897 ORTHO05D008718 4.6e-82 308.5 255 63.9
SalBow1G3579 Salvia bowleyana HOM05D002897 ORTHO05D008718 7.9e-82 307.8 259 64.1
Cc05_g03270 Coffea canephora HOM05D002897 ORTHO05D008718 1.8e-81 306.6 251 63.7
Lj8C128G4 Lonicera japonica HOM05D002897 ORTHO05D008718 2.3e-81 306.2 255 64.3
SalBow1G2496 Salvia bowleyana HOM05D002897 ORTHO05D008718 2.3e-81 306.2 259 63.7
Migut.H01234 Erythranthe guttata HOM05D002897 ORTHO05D008718 6.7e-81 304.7 264 63.6
Sc06g0009610 Simmondsia chinensis HOM05D002897 ORTHO05D008718 1.9e-80 303.1 259 62.9
AL1G14810 Arabidopsis lyrata HOM05D002897 ORTHO05D008718 7.4e-80 301.2 254 63.8
Thhalv10008572m.g Eutrema salsugineum HOM05D002897 ORTHO05D008718 3.7e-79 298.9 252 62.3
THA.LOC104826141 Tarenaya hassleriana HOM05D002897 ORTHO05D008718 2.4e-78 296.2 251 63.3
Aqoxy1G03476 Aquilegia oxysepala HOM05D002897 ORTHO05D008718 4.1e-78 295.4 257 64.2
Sp1g03930 Schrenkiella parvula HOM05D002897 ORTHO05D008718 5.3e-78 295.0 252 63.1
AT1G05060 Arabidopsis thaliana HOM05D002897 ORTHO05D008718 6.9e-78 294.7 254 63.4
Carub.0001s0433 Capsella rubella HOM05D002897 ORTHO05D008718 1.2e-77 293.9 256 61.7
Glyma.14G046500 Glycine max HOM05D002897 ORTHO05D008718 3.8e-76 288.9 253 63.6
arahy.Tifrunner.gnm1.ann1.QRVI7E Arachis hypogaea HOM05D002897 ORTHO05D008718 8.5e-76 287.7 267 58.8
Glyma.02G270500 Glycine max HOM05D002897 ORTHO05D008718 5.5e-75 285.0 250 62.0
BcaC05g27288 Brassica carinata HOM05D002897 ORTHO05D008718 7.2e-75 284.6 252 59.9
BraA09t38920Z Brassica rapa HOM05D002897 ORTHO05D008718 9.4e-75 284.3 255 60.0
arahy.Tifrunner.gnm1.ann1.YEZ88R Arachis hypogaea HOM05D002897 ORTHO05D008718 2.1e-74 283.1 267 58.1
BolC5t31920H Brassica oleracea HOM05D002897 ORTHO05D008718 2.1e-74 283.1 252 59.5
BcaB07g32946 Brassica carinata HOM05D002897 ORTHO05D008718 2.7e-74 282.7 252 59.5
Ca_06120_v3 Cicer arietinum L. HOM05D002897 ORTHO05D008718 3.6e-74 282.3 253 59.3
Eucgr.A01101 Eucalyptus grandis HOM05D002897 ORTHO05D008718 3.6e-74 282.3 265 56.2
Phvul.008G211400 Phaseolus vulgaris HOM05D002897 ORTHO05D008718 3.6e-74 282.3 256 62.1
AUR62035641 Chenopodium quinoa HOM05D002897 ORTHO05D008718 4.6e-74 282.0 252 59.5
MBI19_g24999_MAGBIO Magnolia biondii HOM05D002897 ORTHO05D008718 4.6e-74 282.0 257 61.1
TPR.G14446 Trifolium pratense HOM05D002897 ORTHO05D008718 4.6e-74 282.0 252 59.5
Medtr5g085980 Medicago truncatula HOM05D002897 ORTHO05D008718 1.4e-73 280.4 250 60.0
VMungo0647G1784 Vigna mungo HOM05D002897 ORTHO05D008718 1.8e-73 280.0 257 61.9
Zm00001eb280010 Zea mays HOM05D002897 ORTHO05D008718 5.1e-73 278.5 252 57.5
CARHR004510 Cardamine hirsuta HOM05D002897 ORTHO05D008718 2.5e-72 276.2 254 59.8
Lalb_Chr04g0249891 Lupinus albus HOM05D002897 ORTHO05D008718 5.7e-72 275.0 257 58.4
Psat4g114440 Pisum sativum HOM05D002897 ORTHO05D008718 6.3e-71 271.6 250 57.6
EL10Ac4g07512 Beta vulgaris HOM05D002897 ORTHO05D008718 8.2e-71 271.2 261 56.3
A09p33710 Brassica napus HOM05D002897 ORTHO05D008718 1.4e-70 270.4 280 54.6
CDE07G0516 Ceratophyllum demersum HOM05D002897 ORTHO05D008718 4.1e-70 268.9 251 53.8
C05p31940 Brassica napus HOM05D002897 ORTHO05D008718 5.3e-70 268.5 277 54.2
Hma1.2p1_2044F.1_g312360 Hydrangea macrophylla HOM05D002897 ORTHO05D008718 2.6e-69 266.2 192 75.0
Os06g0239700 Oryza sativa ssp. japonica HOM05D002897 ORTHO05D008718 4.5e-69 265.4 251 54.2
MD17G1102200 Malus domestica HOM05D002897 ORTHO05D008718 1.7e-68 263.5 212 68.9
AUR62017163 Chenopodium quinoa HOM05D002897 ORTHO05D008718 2.2e-68 263.1 255 57.3
Aqoxy1G03469 Aquilegia oxysepala HOM05D002897 ORTHO05D008718 2.9e-68 262.7 258 58.1
LjContig00564g0002899 Lotus japonicus HOM05D002897 ORTHO05D008718 7.2e-67 258.1 258 56.2
PSO210G2604 Papaver somniferum HOM05D002897 ORTHO05D008718 1.8e-62 243.4 258 51.9
DCAR_012931 Daucus carota HOM05D002897 ORTHO05D008718 2.0e-61 240.0 255 53.3
Aa31LG1G19710 Aethionema arabicum HOM05D002897 ORTHO05D008718 4.2e-59 232.3 302 45.7
FAN14G2576 Fragaria x ananassa HOM05D002897 ORTHO05D008718 1.8e-57 226.9 254 53.5
HPP92_017354 Vanilla planifolia HOM05D002897 ORTHO05D008718 1.3e-55 220.7 245 49.4
COL.COLO4_21853 Corchorus olitorius HOM05D002897 ORTHO05D008718 2.6e-53 213.0 157 71.3
CSS0034853 Camellia sinensis var. sinensis HOM05D002897 ORTHO05D008718 3.4e-48 196.1 172 62.8
unitig_21.g21003 Utricularia gibba HOM05D002897 ORTHO05D008718 9.7e-48 194.5 160 59.4
SEGI_41028 Sequoiadendron giganteum HOM05D002897 ORTHO05D008718 1.2e-40 171.0 240 44.2
Pp3c23_20260 Physcomitrium patens HOM05D002897 ORTHO05D008718 5.5e-35 152.1 244 39.3
ATR0059G011 Amborella trichopoda HOM05D002897 ORTHO05D008718 5.2e-33 145.6 143 59.4
AagrBONN_evm.TU.Sc2ySwM_117.2821 Anthoceros agrestis HOM05D002897 ORTHO05D008718 5.0e-28 129.0 236 35.2
MD06G1049400 Malus domestica HOM05D002897 ORTHO05D008718 8.9e-25 118.2 128 57.0
CANSAT64G1786 Cannabis sativa HOM05D002897 ORTHO05D008718 3.6e-18 96.3 59 69.5
ATR0059G040 Amborella trichopoda HOM05D002897 ORTHO05D008718 1.1e-17 94.7 92 50.0
SMO290G0011 Selaginella moellendorffii HOM05D013342 ORTHO05D008718 1.6e-13 80.9 219 28.8
SMO356G0703 Selaginella moellendorffii HOM05D013342 ORTHO05D008718 2.1e-13 80.5 219 29.2
HPP92_017340 Vanilla planifolia HOM05D002897 ORTHO05D008718 5.2e-09 65.9 108 40.7
Aa31sc72G10 Aethionema arabicum HOM05D002897 ORTHO05D008718 2.2e-07 60.5 114 36.0


User provided reference genes

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