Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021980 Camellia sinensis var. sinensis HOM05D020499 ORTHO05D024702 1.6e-42 175.6 84 100.0
CSS0028897 Camellia sinensis var. sinensis HOM05D020499 ORTHO05D024702 1.6e-42 175.6 84 100.0
CSS0006533 Camellia sinensis var. sinensis HOM05D020499 ORTHO05D024702 9.5e-40 166.4 84 95.2
CSS0023114 Camellia sinensis var. sinensis HOM05D020499 ORTHO05D024702 9.5e-40 166.4 84 95.2
PSO339G1989 Papaver somniferum HOM05D000004 ORTHO05D000002 4.9e-12 74.3 62 58.1
Thecc.01G232700 Theobroma cacao HOM05D000004 ORTHO05D000002 6.0e-10 67.4 76 44.7
Thecc.03G066200 Theobroma cacao HOM05D000004 ORTHO05D000002 7.8e-10 67.0 76 46.1
CSS0043413 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.0e-09 66.6 56 53.6
CSS0004631 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.3e-09 65.5 56 51.8
Rhsim03G0232100 Rhododendron simsii HOM05D000004 ORTHO05D007985 3.0e-09 65.1 77 41.6
CSS0023711 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.1e-09 64.3 55 52.7
Prupe.8G229300 Prunus persica HOM05D000650 ORTHO05D000735 5.1e-09 64.3 59 52.5
Thecc.05G097300 Theobroma cacao HOM05D000004 ORTHO05D000002 8.7e-09 63.5 76 42.1
TWI14G0868 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 8.7e-09 63.5 53 56.6
CSS0049161 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.5e-08 62.8 56 51.8
CSS0008496 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.5e-08 62.0 56 50.0
CSS0022143 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.5e-08 62.0 56 50.0
Rhsim02G0058400 Rhododendron simsii HOM05D000004 ORTHO05D000002 2.5e-08 62.0 56 50.0
CSS0011571 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.3e-08 61.2 56 51.8
Hma1.2p1_0042F.1_g025490 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 7.3e-08 60.5 55 52.7
SEGI_07278 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 7.3e-08 60.5 55 50.9
TWI77G0040 Tripterygium wilfordii HOM05D000188 ORTHO05D000362 9.6e-08 60.1 57 45.6
EL10Ac4g09853 Beta vulgaris HOM05D000004 ORTHO05D000002 1.2e-07 59.7 56 44.6
CSS0023637 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.2e-07 59.7 56 48.2
TWI14G0262 Tripterygium wilfordii HOM05D000650 ORTHO05D000735 1.2e-07 59.7 66 43.9
TWI73G0917 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.2e-07 59.7 53 52.8
Atru.chr6.117 Acer truncatum HOM05D000004 ORTHO05D000002 1.6e-07 59.3 59 47.5
BcaC05g27996 Brassica carinata HOM05D000004 ORTHO05D000002 1.6e-07 59.3 56 44.6
Rhsim04G0004700 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.6e-07 59.3 73 39.7
TWI09G1040 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 2.1e-07 58.9 53 54.7
Hma1.2p1_1832F.1_g304590 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 2.8e-07 58.5 80 38.8
Rhsim02G0024000 Rhododendron simsii HOM05D000004 ORTHO05D000002 2.8e-07 58.5 57 45.6
CSS0034640 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.6e-07 58.2 54 50.0
CSS0000480 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.7e-07 57.8 56 44.6
CSS0024529 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.7e-07 57.8 56 44.6
SEGI_24325 Sequoiadendron giganteum HOM05D020499 ORTHO05D000002 4.7e-07 57.8 60 46.7
TWI63G0248 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 4.7e-07 57.8 57 43.9
SEGI_34349 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 6.2e-07 57.4 55 47.3
TWI34G1848 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 6.2e-07 57.4 57 43.9
Rhsim06G0128700 Rhododendron simsii HOM05D000004 ORTHO05D012524 8.1e-07 57.0 61 47.5
SEGI_13621 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 8.1e-07 57.0 64 42.2
Hma1.2p1_0085F.1_g044690 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 1.1e-06 56.6 84 38.1
SEGI_26455 Sequoiadendron giganteum HOM05D000004 ORTHO05D024702 1.1e-06 56.6 78 41.0
Hma1.2p1_0975F.1_g243150 Hydrangea macrophylla HOM05D034186 ORTHO05D000002 1.4e-06 56.2 63 41.3
SHI08945 Sapria himalayana HOM05D000004 ORTHO05D000002 1.8e-06 55.8 63 42.9
RcHm_v2.0_Chr3g0461871 Rosa chinensis HOM05D000004 ORTHO05D000002 2.4e-06 55.5 55 47.3
RcHm_v2.0_Chr4g0427231 Rosa chinensis HOM05D000004 ORTHO05D000002 2.4e-06 55.5 55 47.3
TWI32G0910 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 2.4e-06 55.5 64 40.6
FvH4_2g17922 Fragaria vesca HOM05D000004 ORTHO05D000002 3.1e-06 55.1 59 44.1
Hma1.2p1_3477F.1_g336310 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 3.1e-06 55.1 65 46.2
MBI02_g46969_MAGBIO Magnolia biondii HOM05D000004 ORTHO05D000002 3.1e-06 55.1 58 43.1
PSO063G5531 Papaver somniferum HOM05D000004 ORTHO05D000002 3.1e-06 55.1 56 44.6
SHI15021 Sapria himalayana HOM05D000004 ORTHO05D000002 3.1e-06 55.1 61 44.3
SEGI_00165 Sequoiadendron giganteum HOM05D000067 ORTHO05D000002 3.1e-06 55.1 73 45.2
FvH4_2g19253 Fragaria vesca HOM05D000004 ORTHO05D000002 4.0e-06 54.7 56 46.4
FvH4_4g14287 Fragaria vesca HOM05D000004 ORTHO05D000002 4.0e-06 54.7 56 39.3
PSO063G0884 Papaver somniferum HOM05D001642 ORTHO05D000002 4.0e-06 54.7 57 45.6
SHI00352 Sapria himalayana HOM05D000004 ORTHO05D000002 4.0e-06 54.7 61 44.3
SHI03109 Sapria himalayana HOM05D000004 ORTHO05D000002 4.0e-06 54.7 61 44.3
SHI07308 Sapria himalayana HOM05D000004 ORTHO05D000002 4.0e-06 54.7 61 44.3
SHI50378 Sapria himalayana HOM05D000004 ORTHO05D000002 4.0e-06 54.7 61 44.3
SHI50854 Sapria himalayana HOM05D000004 ORTHO05D000002 4.0e-06 54.7 61 44.3
SHI50872 Sapria himalayana HOM05D000004 ORTHO05D000002 4.0e-06 54.7 61 44.3
SHI54655 Sapria himalayana HOM05D000004 ORTHO05D000002 4.0e-06 54.7 61 44.3
SHI54723 Sapria himalayana HOM05D000004 ORTHO05D000002 4.0e-06 54.7 61 44.3
SHI55032 Sapria himalayana HOM05D000004 ORTHO05D000002 4.0e-06 54.7 61 44.3
Hund05069 Selenicereus undatus HOM05D014633 ORTHO05D012524 4.0e-06 54.7 53 54.7
TWI12G0374 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 4.0e-06 54.7 71 38.0
TWI74G1083 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 4.0e-06 54.7 71 38.0
FvH4_4g12741 Fragaria vesca HOM05D000004 ORTHO05D000002 5.2e-06 54.3 59 42.4
QL04p050706 Quercus lobata HOM05D000059 ORTHO05D009759 5.2e-06 54.3 69 39.1
SEGI_40688 Sequoiadendron giganteum HOM05D020499 ORTHO05D000002 5.2e-06 54.3 55 52.7
BcaC03g16463 Brassica carinata HOM05D000004 ORTHO05D000002 6.9e-06 53.9 55 41.8
Atru.chr8.135 Acer truncatum HOM05D000004 ORTHO05D000002 9.0e-06 53.5 56 44.6
QL02p062220 Quercus lobata HOM05D000004 ORTHO05D000002 9.0e-06 53.5 56 44.6
QL05p044227 Quercus lobata HOM05D000004 ORTHO05D000002 9.0e-06 53.5 56 44.6
QL05p084077 Quercus lobata HOM05D000004 ORTHO05D000002 9.0e-06 53.5 56 44.6
QL93p0053_0688 Quercus lobata HOM05D000004 ORTHO05D000002 9.0e-06 53.5 56 44.6
TWI36G1097 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 9.0e-06 53.5 57 43.9


User provided reference genes

Program Settings