Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014503 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 2.4e-30 134.8 66 100.0
CSS0021979 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 2.4e-30 134.8 66 100.0
CSS0015421 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 4.7e-26 120.6 63 92.1
CSS0022236 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 3.4e-24 114.4 63 88.9
GSVIVG01029768001 Vitis vinifera HOM05D007316 ORTHO05D009393 4.4e-24 114.0 61 86.9
Duzib106G1284 Durio zibethinus HOM05D007316 ORTHO05D009393 7.5e-24 113.2 62 82.3
Hma1.2p1_0157F.1_g069460 Hydrangea macrophylla HOM05D007316 ORTHO05D009393 9.8e-24 112.8 62 85.5
Duzib128G0483 Durio zibethinus HOM05D007316 ORTHO05D009393 1.7e-23 112.1 62 82.3
Manes.17G057300 Manihot esculenta HOM05D007316 ORTHO05D009393 2.2e-23 111.7 61 85.2
QL09p015786 Quercus lobata HOM05D007316 ORTHO05D009393 3.7e-23 110.9 62 82.3
QL09p023249 Quercus lobata HOM05D007316 ORTHO05D009393 3.7e-23 110.9 62 82.3
Thecc.05G261200 Theobroma cacao HOM05D007316 ORTHO05D009393 6.3e-23 110.2 62 82.3
Potri.004G058400 Populus trichocarpa HOM05D007316 ORTHO05D009393 1.1e-22 109.4 61 82.0
THA.LOC104813939 Tarenaya hassleriana HOM05D007316 ORTHO05D009393 1.1e-22 109.4 62 82.3
Cc02_g36870 Coffea canephora HOM05D007316 ORTHO05D009393 1.8e-22 108.6 62 83.9
Gohir.D13G105800 Gossypium hirsutum HOM05D007316 ORTHO05D009393 1.8e-22 108.6 62 80.6
Phvul.001G220400 Phaseolus vulgaris HOM05D007316 ORTHO05D009393 1.8e-22 108.6 61 82.0
QL02p030600 Quercus lobata HOM05D007316 ORTHO05D009393 1.8e-22 108.6 62 80.6
RcHm_v2.0_Chr4g0387941 Rosa chinensis HOM05D007316 ORTHO05D009393 2.4e-22 108.2 62 75.8
A07p29930 Brassica napus HOM05D007316 ORTHO05D009393 4.1e-22 107.5 62 80.6
C06p34200 Brassica napus HOM05D007316 ORTHO05D009393 4.1e-22 107.5 62 80.6
BolC6t38541H Brassica oleracea HOM05D007316 ORTHO05D009393 4.1e-22 107.5 62 80.6
BraA07t30632Z Brassica rapa HOM05D007316 ORTHO05D009393 4.1e-22 107.5 62 80.6
RcHm_v2.0_Chr4g0387841 Rosa chinensis HOM05D007316 ORTHO05D009393 4.1e-22 107.5 62 75.8
Ciclev10023234m.g Citrus clementina HOM05D007316 ORTHO05D009393 5.4e-22 107.1 62 80.6
Potri.011G067800 Populus trichocarpa HOM05D007316 ORTHO05D009393 5.4e-22 107.1 61 78.7
RcHm_v2.0_Chr4g0385941 Rosa chinensis HOM05D007316 ORTHO05D009393 5.4e-22 107.1 62 75.8
AL2G32940 Arabidopsis lyrata HOM05D007316 ORTHO05D009393 9.1e-22 106.3 62 79.0
Ca_09261_v3 Cicer arietinum L. HOM05D007316 ORTHO05D009393 9.1e-22 106.3 61 78.7
Migut.B00683 Erythranthe guttata HOM05D007316 ORTHO05D009393 9.1e-22 106.3 60 81.7
Migut.B00911 Erythranthe guttata HOM05D007316 ORTHO05D009393 9.1e-22 106.3 60 81.7
Psat3g015560 Pisum sativum HOM05D007316 ORTHO05D009393 9.1e-22 106.3 61 80.3
Aa31LG4G3460 Aethionema arabicum HOM05D007316 ORTHO05D009393 1.2e-21 105.9 62 80.6
Cfa016046 Carpinus fangiana HOM05D007316 ORTHO05D009393 1.2e-21 105.9 62 80.6
FvH4_4g00490 Fragaria vesca HOM05D007316 ORTHO05D009393 1.2e-21 105.9 62 74.2
FAN12G3999 Fragaria x ananassa HOM05D007316 ORTHO05D009393 1.2e-21 105.9 62 74.2
FAN17G1024 Fragaria x ananassa HOM05D007316 ORTHO05D009393 1.2e-21 105.9 62 74.2
FAN22G1131 Fragaria x ananassa HOM05D007316 ORTHO05D009393 1.2e-21 105.9 62 74.2
SalBow3G1440 Salvia bowleyana HOM05D007316 ORTHO05D009393 1.2e-21 105.9 61 80.3
Sed0015703 Sechium edule HOM05D007316 ORTHO05D009393 1.2e-21 105.9 61 80.3
TWI23G0494 Tripterygium wilfordii HOM05D007316 ORTHO05D009393 1.2e-21 105.9 62 79.0
CANSAT56G2903 Cannabis sativa HOM05D007316 ORTHO05D009393 1.6e-21 105.5 61 80.3
Glyma.19G223500 Glycine max HOM05D007316 ORTHO05D009393 1.6e-21 105.5 61 80.3
ClCG09G016900 Citrullus lanatus HOM05D007316 ORTHO05D009393 2.0e-21 105.1 61 80.3
Glyma.03G226500 Glycine max HOM05D007316 ORTHO05D009393 2.7e-21 104.8 61 80.3
MELO3C021892.2 Cucumis melo HOM05D007316 ORTHO05D009393 3.5e-21 104.4 61 78.7
Sp5g28140 Schrenkiella parvula HOM05D007316 ORTHO05D009393 3.5e-21 104.4 62 77.4
CsaV3_2G036390 Cucumis sativus L. HOM05D007316 ORTHO05D009393 4.5e-21 104.0 61 78.7
Medtr7g111090 Medicago truncatula HOM05D007316 ORTHO05D009393 5.9e-21 103.6 61 78.7
Atru.chr12.1494 Acer truncatum HOM05D007316 ORTHO05D009393 7.7e-21 103.2 61 78.7
Eucgr.H00565 Eucalyptus grandis HOM05D007316 ORTHO05D009393 7.7e-21 103.2 62 74.2
Lj1g0006735 Lotus japonicus HOM05D007316 ORTHO05D009393 7.7e-21 103.2 61 75.4
AT1G73177 Arabidopsis thaliana HOM05D007316 ORTHO05D009393 2.9e-20 101.3 62 75.8
arahy.Tifrunner.gnm1.ann1.AE1MMP Arachis hypogaea HOM05D007316 ORTHO05D009393 2.9e-20 101.3 61 75.4
arahy.Tifrunner.gnm1.ann1.CUXT1U Arachis hypogaea HOM05D007316 ORTHO05D009393 2.9e-20 101.3 61 75.4
Sopen08g002530 Solanum pennellii HOM05D007316 ORTHO05D009393 3.8e-20 100.9 65 75.4
Peaxi162Scf00071g00128 Petunia axillaris HOM05D007316 ORTHO05D009393 6.6e-20 100.1 58 79.3
Prupe.3G122600 Prunus persica HOM05D007316 ORTHO05D009393 6.6e-20 100.1 62 74.2
HanXRQChr07g0193721 Helianthus annuus HOM05D007316 ORTHO05D009393 8.6e-20 99.8 60 75.0
Carub.0002s1996 Capsella rubella HOM05D007316 ORTHO05D009393 1.1e-19 99.4 62 74.2
PGSC0003DMG400026307 Solanum tuberosum HOM05D007316 ORTHO05D009393 2.5e-19 98.2 65 72.3
Cpa.g.sc233.10 Carica papaya HOM05D007316 ORTHO05D009393 3.3e-19 97.8 62 75.8
CARHR066170 Cardamine hirsuta HOM05D007316 ORTHO05D009393 4.2e-19 97.4 62 72.6
COL.COLO4_20544 Corchorus olitorius HOM05D007316 ORTHO05D009393 5.5e-19 97.1 63 73.0
BcaC08g45665 Brassica carinata HOM05D007316 ORTHO05D009393 7.2e-19 96.7 77 64.9
Lsat_1_v5_gn_9_84180 Lactuca sativa HOM05D007316 ORTHO05D009393 7.2e-19 96.7 60 70.0
PGR119G2118 Punica granatum HOM05D007316 ORTHO05D009393 1.2e-18 95.9 60 73.3
Lalb_Chr04g0260251 Lupinus albus HOM05D007316 ORTHO05D009393 2.1e-18 95.1 59 72.9
MD09G1239400 Malus domestica HOM05D007316 ORTHO05D009393 2.1e-18 95.1 60 71.7
Aqoxy7G02856 Aquilegia oxysepala HOM05D007316 ORTHO05D009393 6.1e-18 93.6 60 71.7
CSS0008863 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 8.3e-15 83.2 44 93.2
CSS0021742 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 8.3e-15 83.2 48 85.4
CSS0044079 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 8.3e-15 83.2 44 93.2
CSS0028514 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 1.1e-14 82.8 44 90.9
CSS0044918 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 1.1e-14 82.8 44 90.9
CSS0047183 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 1.1e-14 82.8 44 90.9
ECA236G4186 Erigeron canadensis HOM05D007316 ORTHO05D009393 7.0e-14 80.1 61 60.7
CSS0025187 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 9.2e-14 79.7 44 86.4
CSS0047605 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 9.2e-14 79.7 44 86.4
TAR362G0014 Trochodendron aralioides HOM05D007316 ORTHO05D009393 9.2e-14 79.7 43 83.7
Nn7g37509 Nelumbo nucifera HOM05D007316 ORTHO05D009393 2.0e-13 78.6 42 85.7
vmacro19806 Vaccinium macrocarpon HOM05D007316 ORTHO05D009393 2.7e-13 78.2 50 74.0
Thhalv10019421m.g Eutrema salsugineum HOM05D007316 ORTHO05D009393 4.5e-13 77.4 59 66.1
CiPaw.05G216300 Carya illinoinensis HOM05D007316 ORTHO05D009393 1.0e-12 76.3 55 70.9
Oeu034759.1 Olea europaea HOM05D007316 ORTHO05D009393 2.3e-12 75.1 44 77.3
Os07g0633800 Oryza sativa ssp. japonica HOM05D007316 ORTHO05D009393 2.3e-12 75.1 60 58.3
GSVIVG01026029001 Vitis vinifera HOM05D007316 ORTHO05D009393 1.9e-11 72.0 44 72.7
Actinidia11709 Actinidia chinensis HOM05D007316 ORTHO05D009393 9.5e-11 69.7 35 88.6
Gorai.013G118500 Gossypium raimondii HOM05D007316 ORTHO05D009393 2.8e-10 68.2 62 58.1
MBI18_g28941_MAGBIO Magnolia biondii HOM05D000032 ORTHO05D004701 8.0e-10 66.6 43 67.4
AUR62021328 Chenopodium quinoa HOM05D007316 ORTHO05D009393 3.1e-09 64.7 43 67.4
Rhsim05G0117300 Rhododendron simsii HOM05D007316 ORTHO05D009393 3.1e-09 64.7 64 56.2
RhsimUnG0015700 Rhododendron simsii HOM05D007316 ORTHO05D009393 3.1e-09 64.7 64 56.2
Ah.09g230190 Amaranthus hybridus HOM05D007316 ORTHO05D009393 6.8e-09 63.5 43 67.4
Gohir.A13G102600 Gossypium hirsutum HOM05D007316 ORTHO05D009393 6.8e-09 63.5 62 54.8
EL10Ac8g18312 Beta vulgaris HOM05D007316 ORTHO05D009393 1.5e-08 62.4 43 65.1
Solyc08g006570.4 Solanum lycopersicum HOM05D007316 ORTHO05D009393 2.2e-07 58.5 38 65.8
Mapoly0010s0075 Marchantia polymorpha HOM05D007316 ORTHO05D009393 2.9e-07 58.2 56 46.4
CAN.G530.4 Capsicum annuum HOM05D007316 ORTHO05D009393 6.4e-07 57.0 35 68.6
MCO03G596 Micromonas commoda HOM05D007316 ORTHO05D009393 7.0e-06 53.5 56 41.1


User provided reference genes

Program Settings