Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021967 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 3.7e-219 764.6 396 100.0
Dinv25255 Davidia involucrata HOM05D006137 ORTHO05D007697 1.0e-176 623.6 387 80.4
CSS0050317 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 1.4e-173 613.2 307 99.7
Rhsim11G0021000 Rhododendron simsii HOM05D006137 ORTHO05D007697 1.8e-157 559.7 408 72.8
Hma1.2p1_1027F.1_g249480 Hydrangea macrophylla HOM05D006137 ORTHO05D007697 6.4e-155 551.2 396 72.2
TAR629G2895 Trochodendron aralioides HOM05D006137 ORTHO05D007697 3.7e-150 535.4 384 71.1
Gorai.008G224300 Gossypium raimondii HOM05D006137 ORTHO05D007697 2.5e-143 512.7 324 75.0
Gohir.D12G208800 Gossypium hirsutum HOM05D006137 ORTHO05D007697 5.7e-143 511.5 324 74.4
CiPaw.11G098100 Carya illinoinensis HOM05D006137 ORTHO05D007697 1.3e-142 510.4 383 68.4
Gohir.A12G206400 Gossypium hirsutum HOM05D006137 ORTHO05D007697 1.1e-141 507.3 319 75.2
RcHm_v2.0_Chr7g0211741 Rosa chinensis HOM05D006137 ORTHO05D007697 1.4e-141 506.9 313 78.0
Thecc.03G309800 Theobroma cacao HOM05D006137 ORTHO05D007697 2.4e-141 506.1 383 67.1
GSVIVG01013108001 Vitis vinifera HOM05D006137 ORTHO05D007697 9.0e-141 504.2 343 73.5
Cc08_g03270 Coffea canephora HOM05D006137 ORTHO05D007697 2.0e-140 503.1 395 65.3
FvH4_5g23010 Fragaria vesca HOM05D006137 ORTHO05D007697 1.0e-139 500.7 313 77.0
Potri.003G096600 Populus trichocarpa HOM05D006137 ORTHO05D007697 2.2e-139 499.6 387 68.0
FAN08G1929 Fragaria x ananassa HOM05D006137 ORTHO05D007697 2.9e-139 499.2 394 66.2
FAN04G0555 Fragaria x ananassa HOM05D006137 ORTHO05D007697 3.8e-139 498.8 313 76.0
MD06G1026400 Malus domestica HOM05D006137 ORTHO05D007697 5.0e-139 498.4 319 74.3
FAN18G2668 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.4e-138 496.9 304 78.3
Nitab4.5_0002190g0020 Nicotiana tabacum HOM05D006137 ORTHO05D007697 5.5e-138 495.0 392 65.1
Duzib068G1414 Durio zibethinus HOM05D006137 ORTHO05D007697 7.2e-138 494.6 391 65.0
TWI15G1160 Tripterygium wilfordii HOM05D006137 ORTHO05D007697 1.2e-137 493.8 382 66.2
Nn3g19394 Nelumbo nucifera HOM05D006137 ORTHO05D007697 2.7e-137 492.7 324 74.1
FvH4_2g06760 Fragaria vesca HOM05D006137 ORTHO05D007697 3.9e-136 488.8 326 73.3
FAN13G2862 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.5e-135 486.9 330 72.4
Solyc08g076410.4 Solanum lycopersicum HOM05D006137 ORTHO05D007697 2.0e-135 486.5 373 67.0
Sopen08g024990 Solanum pennellii HOM05D006137 ORTHO05D007697 3.3e-135 485.7 384 64.6
Ciclev10001458m.g Citrus clementina HOM05D006137 ORTHO05D007697 4.3e-135 485.3 313 74.4
Peaxi162Scf00170g00615 Petunia axillaris HOM05D006137 ORTHO05D007697 9.7e-135 484.2 383 64.0
arahy.Tifrunner.gnm1.ann1.3JZK2J Arachis hypogaea HOM05D006137 ORTHO05D007697 1.3e-134 483.8 342 69.3
arahy.Tifrunner.gnm1.ann1.J91B8N Arachis hypogaea HOM05D006137 ORTHO05D007697 1.3e-134 483.8 342 69.3
HanXRQChr04g0098961 Helianthus annuus HOM05D006137 ORTHO05D007697 1.3e-134 483.8 387 63.0
Atru.chr6.1520 Acer truncatum HOM05D006137 ORTHO05D007697 1.7e-134 483.4 391 64.5
FAN18G2637 Fragaria x ananassa HOM05D006137 ORTHO05D007697 2.2e-134 483.0 348 69.3
Lj3g0008594 Lotus japonicus HOM05D006137 ORTHO05D007697 1.4e-133 480.3 372 64.8
Aqoxy2G03876 Aquilegia oxysepala HOM05D006137 ORTHO05D007697 1.8e-133 479.9 318 69.8
PGSC0003DMG400014792 Solanum tuberosum HOM05D006137 ORTHO05D007697 2.4e-133 479.6 384 64.1
TPR.G19427 Trifolium pratense HOM05D006137 ORTHO05D007697 5.3e-133 478.4 317 71.9
VMungo1215G0535 Vigna mungo HOM05D006137 ORTHO05D007697 5.3e-133 478.4 314 72.3
Glyma.01G014900 Glycine max HOM05D006137 ORTHO05D007697 9.1e-133 477.6 315 72.1
ECA233G6209 Erigeron canadensis HOM05D006137 ORTHO05D007697 2.0e-132 476.5 370 64.6
Medtr5g029550 Medicago truncatula HOM05D006137 ORTHO05D007697 4.5e-132 475.3 339 67.8
CAN.G726.20 Capsicum annuum HOM05D006137 ORTHO05D007697 7.7e-132 474.6 392 62.2
COL.COLO4_16947 Corchorus olitorius HOM05D006137 ORTHO05D007697 7.7e-132 474.6 306 74.2
AT2G35500 Arabidopsis thaliana HOM05D006137 ORTHO05D007697 1.0e-131 474.2 319 70.5
MELO3C013825.2 Cucumis melo HOM05D006137 ORTHO05D007697 1.0e-131 474.2 389 63.2
Carub.0004s1719 Capsella rubella HOM05D006137 ORTHO05D007697 5.0e-131 471.9 345 67.5
PGR042G0393 Punica granatum HOM05D006137 ORTHO05D007697 5.0e-131 471.9 391 62.4
Sabra03G0065200 Salix brachista HOM05D006137 ORTHO05D007697 5.0e-131 471.9 307 73.9
Lalb_Chr09g0325501 Lupinus albus HOM05D006137 ORTHO05D007697 1.1e-130 470.7 391 62.1
Phvul.002G137400 Phaseolus vulgaris HOM05D006137 ORTHO05D007697 1.1e-130 470.7 317 70.3
AL4G31550 Arabidopsis lyrata HOM05D006137 ORTHO05D007697 1.4e-130 470.3 322 69.9
A04p26930 Brassica napus HOM05D006137 ORTHO05D007697 7.2e-130 468.0 328 68.0
C04p64320 Brassica napus HOM05D006137 ORTHO05D007697 7.2e-130 468.0 328 68.0
BraA04t18192Z Brassica rapa HOM05D006137 ORTHO05D007697 1.2e-129 467.2 328 68.0
BcaB06g28845 Brassica carinata HOM05D006137 ORTHO05D007697 1.6e-129 466.8 328 67.7
CsaV3_3G001380 Cucumis sativus L. HOM05D006137 ORTHO05D007697 1.6e-129 466.8 396 61.6
Thhalv10016768m.g Eutrema salsugineum HOM05D006137 ORTHO05D007697 2.1e-129 466.5 329 68.7
vmacro08163 Vaccinium macrocarpon HOM05D006137 ORTHO05D007697 2.1e-129 466.5 272 84.2
DCAR_008226 Daucus carota HOM05D006137 ORTHO05D007697 4.7e-129 465.3 305 74.4
BolC4t27919H Brassica oleracea HOM05D006137 ORTHO05D007697 1.0e-128 464.2 328 67.7
Sp4g17720 Schrenkiella parvula HOM05D006137 ORTHO05D007697 1.4e-128 463.8 316 69.6
CARHR129650 Cardamine hirsuta HOM05D006137 ORTHO05D007697 2.3e-128 463.0 376 62.0
CANSAT21G0809 Cannabis sativa HOM05D006137 ORTHO05D007697 1.5e-127 460.3 344 66.6
EL10Ac2g03238 Beta vulgaris HOM05D006137 ORTHO05D007697 5.7e-127 458.4 301 73.1
CANSAT21G0548 Cannabis sativa HOM05D006137 ORTHO05D007697 7.4e-127 458.0 376 62.8
Nitab4.5_0003416g0030 Nicotiana tabacum HOM05D006137 ORTHO05D007697 6.3e-126 454.9 393 61.3
Oeu017078.1 Olea europaea HOM05D006137 ORTHO05D007697 6.3e-126 454.9 308 71.1
Psat2g138120 Pisum sativum HOM05D006137 ORTHO05D007697 5.3e-125 451.8 332 66.9
PSO782G3150 Papaver somniferum HOM05D006137 ORTHO05D007697 1.5e-124 450.3 386 60.9
ClCG10G001310 Citrullus lanatus HOM05D006137 ORTHO05D007697 7.7e-124 448.0 446 55.2
BcaC02g07708 Brassica carinata HOM05D006137 ORTHO05D007697 3.8e-123 445.7 307 69.7
Lsat_1_v5_gn_6_3681 Lactuca sativa HOM05D006137 ORTHO05D007697 3.8e-123 445.7 387 59.9
MSTRG.24846 Avicennia marina HOM05D006137 ORTHO05D007697 1.9e-122 443.4 335 64.8
Sc24g0002950 Simmondsia chinensis HOM05D006137 ORTHO05D007697 2.3e-120 436.4 289 72.7
PSO063G4597 Papaver somniferum HOM05D006137 ORTHO05D007697 3.0e-120 436.0 302 68.5
THA.LOC104814417 Tarenaya hassleriana HOM05D006137 ORTHO05D007697 1.1e-119 434.1 330 64.5
Sed0022354 Sechium edule HOM05D006137 ORTHO05D007697 1.5e-119 433.7 316 66.5
Ah.09g233490 Amaranthus hybridus HOM05D006137 ORTHO05D007697 5.7e-119 431.8 309 67.3
CDE06G2536 Ceratophyllum demersum HOM05D006137 ORTHO05D007697 6.3e-118 428.3 333 63.7
Migut.A01172 Erythranthe guttata HOM05D006137 ORTHO05D007697 8.2e-118 427.9 320 68.8
FAN24G0436 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.6e-116 423.7 299 70.2
QL12p001513 Quercus lobata HOM05D006137 ORTHO05D007697 2.6e-116 422.9 362 63.5
Aa31LG9G15490 Aethionema arabicum HOM05D006137 ORTHO05D007697 3.8e-115 419.1 363 59.5
HPP92_014848 Vanilla planifolia HOM05D006137 ORTHO05D007697 2.5e-114 416.4 333 61.3
Prupe.5G028300 Prunus persica HOM05D006137 ORTHO05D007697 2.3e-112 409.8 393 57.8
unitig_748.g7545 Utricularia gibba HOM05D006137 ORTHO05D007697 4.0e-112 409.1 316 64.6
Oeu019613.1 Olea europaea HOM05D006137 ORTHO05D007697 1.2e-111 407.5 306 66.3
Os10g0577700 Oryza sativa ssp. japonica HOM05D006137 ORTHO05D007697 8.3e-110 401.4 311 60.8
Eucgr.E00233 Eucalyptus grandis HOM05D006137 ORTHO05D007697 3.1e-109 399.4 293 66.6
Lj2A232T29 Lonicera japonica HOM05D006137 ORTHO05D007697 1.3e-107 394.0 327 63.9
Oeu019614.1 Olea europaea HOM05D006137 ORTHO05D007697 2.1e-105 386.7 306 63.7
SGA_v2.0_scaffold36G14297 Striga asiatica HOM05D006137 ORTHO05D007697 2.7e-105 386.3 358 56.7
ATR0829G218 Amborella trichopoda HOM05D006137 ORTHO05D007697 1.2e-103 380.9 277 66.8
Zm00001eb025030 Zea mays HOM05D006137 ORTHO05D007697 6.3e-102 375.2 344 54.4
Haze_08142 Corylus avellana HOM05D006137 ORTHO05D007697 1.6e-97 360.5 530 43.2
FAN20G1935 Fragaria x ananassa HOM05D006137 ORTHO05D007697 6.1e-97 358.6 305 62.0
Oeu002327.1 Olea europaea HOM05D006137 ORTHO05D007697 6.1e-97 358.6 225 75.6
SEGI_14560 Sequoiadendron giganteum HOM05D006137 ORTHO05D007697 1.1e-93 347.8 299 56.9
Eucgr.E00231 Eucalyptus grandis HOM05D006137 ORTHO05D007697 9.2e-85 318.2 267 60.7
Mapoly0006s0263 Marchantia polymorpha HOM05D006137 ORTHO05D007697 1.6e-84 317.4 307 49.5
AagrBONN_evm.TU.Sc2ySwM_344.1996 Anthoceros agrestis HOM05D006137 ORTHO05D007697 9.2e-77 291.6 302 47.7
Pp3c12_17740 Physcomitrium patens HOM05D006137 ORTHO05D007697 1.6e-76 290.8 382 39.8
SMO228G0118 Selaginella moellendorffii HOM05D006137 ORTHO05D007697 2.7e-76 290.0 303 46.2
Manes.15G185701 Manihot esculenta HOM05D006137 ORTHO05D007697 6.0e-76 288.9 252 61.5
Ca_25185_v3 Cicer arietinum L. HOM05D006137 ORTHO05D007697 2.8e-65 253.4 185 65.9
Hund09822 Selenicereus undatus HOM05D006137 ORTHO05D007697 3.6e-65 253.1 153 78.4
AUR62002644 Chenopodium quinoa HOM05D006137 ORTHO05D007697 7.1e-61 238.8 202 59.4
Oeu033557.2 Olea europaea HOM05D006137 ORTHO05D007697 3.0e-59 233.4 187 64.7
C03p78000 Brassica napus HOM05D006137 ORTHO05D007697 3.6e-49 199.9 164 60.4
AUR62002645 Chenopodium quinoa HOM05D006137 ORTHO05D007697 5.8e-47 192.6 194 52.6
BolC1t02019H Brassica oleracea HOM05D006137 ORTHO05D007697 2.2e-46 190.7 169 59.2
AUR62040998 Chenopodium quinoa HOM05D006137 ORTHO05D007697 1.4e-45 188.0 134 64.9
Hund09821 Selenicereus undatus HOM05D006137 ORTHO05D000006 1.2e-44 184.9 140 62.9
BolC3t20061H Brassica oleracea HOM05D006137 ORTHO05D007697 2.5e-42 177.2 174 52.9
C01p20920 Brassica napus HOM05D006137 ORTHO05D007697 3.3e-42 176.8 174 54.0
CBR_g18978 Chara braunii HOM05D006137 ORTHO05D007697 8.7e-35 152.1 180 47.2
Glyma.07G152633 Glycine max HOM05D006137 ORTHO05D007697 1.9e-34 151.0 112 65.2
MCO11G470 Micromonas commoda HOM05D006137 ORTHO05D007697 6.2e-33 146.0 205 36.6
AUR62040999 Chenopodium quinoa HOM05D006137 ORTHO05D007697 1.2e-28 131.7 89 69.7
Medtr1g009450 Medicago truncatula HOM05D006137 ORTHO05D007697 1.3e-27 128.3 126 54.0
PRCOL_00002339 Prasinoderma coloniale HOM05D006137 ORTHO05D007697 1.0e-22 112.1 199 32.7
C02p41610 Brassica napus HOM05D006137 ORTHO05D007697 6.7e-11 72.8 46 71.7
BolC2t10179H Brassica oleracea HOM05D006137 ORTHO05D007697 6.7e-11 72.8 46 71.7
BcaC09g50780 Brassica carinata HOM05D006137 ORTHO05D007697 8.8e-11 72.4 99 44.4
BolC2t11174H Brassica oleracea HOM05D006137 ORTHO05D007697 4.8e-09 66.6 31 87.1
Cre16.g659850 Chlamydomonas reinhardtii HOM05D006137 ORTHO05D007697 1.4e-08 65.1 209 25.4
Mapoly0089s0033 Marchantia polymorpha HOM05D002058 ORTHO05D003758 3.5e-07 60.5 108 35.2
MCO12G135 Micromonas commoda HOM05D002058 ORTHO05D003758 1.3e-06 58.5 194 23.7
Mapoly0035s0139 Marchantia polymorpha HOM05D002058 ORTHO05D003758 6.5e-06 56.2 148 27.7


User provided reference genes

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