Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021939 Camellia sinensis var. sinensis HOM05D006090 ORTHO05D007600 1.3e-42 176.0 90 100.0
Dinv19173 Davidia involucrata HOM05D006090 ORTHO05D007600 2.5e-38 161.8 88 89.8
vmacro14732 Vaccinium macrocarpon HOM05D006090 ORTHO05D007600 3.3e-38 161.4 87 90.8
Hma1.2p1_0052F.1_g030080 Hydrangea macrophylla HOM05D006090 ORTHO05D007600 7.3e-38 160.2 88 88.6
Rhsim01G0252800 Rhododendron simsii HOM05D006090 ORTHO05D007600 4.7e-37 157.5 87 89.7
Prupe.8G199000 Prunus persica HOM05D006090 ORTHO05D007600 8.0e-37 156.8 87 87.4
MD05G1171700 Malus domestica HOM05D006090 ORTHO05D007600 1.1e-36 156.4 87 86.2
FvH4_2g18550 Fragaria vesca HOM05D006090 ORTHO05D007600 6.8e-36 153.7 87 83.9
FAN15G1212 Fragaria x ananassa HOM05D006090 ORTHO05D007600 6.8e-36 153.7 87 83.9
MD10G1159900 Malus domestica HOM05D006090 ORTHO05D007600 6.8e-36 153.7 86 86.0
TAR362G1026 Trochodendron aralioides HOM05D006090 ORTHO05D007600 6.8e-36 153.7 88 86.4
BraA08t32537Z Brassica rapa HOM05D006090 ORTHO05D007600 1.2e-35 152.9 88 79.5
Hma1.2p1_0226F.1_g095400 Hydrangea macrophylla HOM05D006090 ORTHO05D007600 1.5e-35 152.5 88 85.2
Nn8g41078 Nelumbo nucifera HOM05D006090 ORTHO05D007600 1.5e-35 152.5 88 83.0
RcHm_v2.0_Chr6g0284111 Rosa chinensis HOM05D006090 ORTHO05D007600 1.5e-35 152.5 87 82.8
Manes.06G087700 Manihot esculenta HOM05D006090 ORTHO05D007600 3.4e-35 151.4 88 79.5
PSO170G6116 Papaver somniferum HOM05D006090 ORTHO05D007600 3.4e-35 151.4 88 83.0
BcaB04g17463 Brassica carinata HOM05D006090 ORTHO05D007600 4.4e-35 151.0 88 78.4
CANSAT21G0941 Cannabis sativa HOM05D006090 ORTHO05D007600 4.4e-35 151.0 87 83.9
PSO445G0009 Papaver somniferum HOM05D006090 ORTHO05D007600 5.8e-35 150.6 88 81.8
AT1G48140 Arabidopsis thaliana HOM05D006090 ORTHO05D007600 7.5e-35 150.2 88 79.5
A08p05190 Brassica napus HOM05D006090 ORTHO05D007600 7.5e-35 150.2 88 78.4
AL1G54720 Arabidopsis lyrata HOM05D006090 ORTHO05D007600 9.8e-35 149.8 88 78.4
BcaC07g37170 Brassica carinata HOM05D006090 ORTHO05D007600 9.8e-35 149.8 88 77.3
C08p05430 Brassica napus HOM05D006090 ORTHO05D007600 9.8e-35 149.8 88 77.3
BolC8t47360H Brassica oleracea HOM05D006090 ORTHO05D007600 9.8e-35 149.8 88 77.3
CARHR037780 Cardamine hirsuta HOM05D006090 ORTHO05D007600 9.8e-35 149.8 88 78.4
Thhalv10011899m.g Eutrema salsugineum HOM05D006090 ORTHO05D007600 9.8e-35 149.8 88 77.3
PGR044G2731 Punica granatum HOM05D006090 ORTHO05D007600 1.3e-34 149.4 88 81.8
Solyc01g005110.3 Solanum lycopersicum HOM05D006090 ORTHO05D007600 1.3e-34 149.4 88 80.7
Sopen01g001130 Solanum pennellii HOM05D006090 ORTHO05D007600 1.3e-34 149.4 88 80.7
TWI18G0803 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 1.3e-34 149.4 88 78.4
Lsat_1_v5_gn_8_5041 Lactuca sativa HOM05D006090 ORTHO05D007600 2.2e-34 148.7 87 82.8
Potri.002G245800 Populus trichocarpa HOM05D006090 ORTHO05D007600 2.2e-34 148.7 88 80.7
CAN.G282.104 Capsicum annuum HOM05D006090 ORTHO05D007600 2.9e-34 148.3 88 80.7
HanXRQChr01g0015271 Helianthus annuus HOM05D006090 ORTHO05D007600 2.9e-34 148.3 88 81.8
Sp1g35110 Schrenkiella parvula HOM05D006090 ORTHO05D007600 2.9e-34 148.3 88 76.1
Carub.0001s3724 Capsella rubella HOM05D006090 ORTHO05D007600 3.7e-34 147.9 88 76.1
Cc06_g17130 Coffea canephora HOM05D006090 ORTHO05D007600 4.9e-34 147.5 88 80.7
SalBow6G1264 Salvia bowleyana HOM05D006090 ORTHO05D007600 4.9e-34 147.5 88 81.8
SalBow6G7055 Salvia bowleyana HOM05D006090 ORTHO05D007600 4.9e-34 147.5 88 81.8
TPR.G6479 Trifolium pratense HOM05D006090 ORTHO05D007600 4.9e-34 147.5 88 79.5
Psat3g148760 Pisum sativum HOM05D006090 ORTHO05D007600 6.4e-34 147.1 88 78.4
CAN.G151.21 Capsicum annuum HOM05D006090 ORTHO05D007600 1.1e-33 146.4 88 79.5
ECA248G3406 Erigeron canadensis HOM05D006090 ORTHO05D007600 1.1e-33 146.4 88 79.5
Gohir.D07G205600 Gossypium hirsutum HOM05D006090 ORTHO05D007600 1.4e-33 146.0 88 77.3
Glyma.08G349000 Glycine max HOM05D006090 ORTHO05D007600 2.4e-33 145.2 88 78.4
Medtr7g056250 Medicago truncatula HOM05D006090 ORTHO05D007600 2.4e-33 145.2 88 76.1
Migut.N03342 Erythranthe guttata HOM05D006090 ORTHO05D007600 3.2e-33 144.8 88 78.4
Lsat_1_v5_gn_5_180801 Lactuca sativa HOM05D006090 ORTHO05D007600 3.2e-33 144.8 83 84.3
Oeu051534.1 Olea europaea HOM05D006090 ORTHO05D007600 3.2e-33 144.8 88 77.3
THA.LOC104802658 Tarenaya hassleriana HOM05D006090 ORTHO05D007600 3.2e-33 144.8 88 77.3
Thecc.02G015400 Theobroma cacao HOM05D006090 ORTHO05D007600 3.2e-33 144.8 88 78.4
Gorai.001G231600 Gossypium raimondii HOM05D006090 ORTHO05D007600 4.1e-33 144.4 88 76.1
CiPaw.01G050400 Carya illinoinensis HOM05D006090 ORTHO05D007600 5.4e-33 144.1 87 80.5
Gohir.A07G199200 Gossypium hirsutum HOM05D006090 ORTHO05D007600 5.4e-33 144.1 88 75.0
FAN24G0022 Fragaria x ananassa HOM05D006090 ORTHO05D007600 7.0e-33 143.7 100 72.0
MBI04_g03342_MAGBIO Magnolia biondii HOM05D006090 ORTHO05D007600 7.0e-33 143.7 88 75.0
Nitab4.5_0014260g0010 Nicotiana tabacum HOM05D006090 ORTHO05D007600 7.0e-33 143.7 88 76.1
Atru.chr6.1016 Acer truncatum HOM05D006090 ORTHO05D007600 9.2e-33 143.3 88 79.5
QL09p032732 Quercus lobata HOM05D006090 ORTHO05D007600 9.2e-33 143.3 86 82.6
Aa31LG10G5590 Aethionema arabicum HOM05D006090 ORTHO05D007600 1.6e-32 142.5 95 71.6
EL10Ac7g17901 Beta vulgaris HOM05D006090 ORTHO05D007600 1.6e-32 142.5 88 72.7
CDE09G0476 Ceratophyllum demersum HOM05D006090 ORTHO05D007600 1.6e-32 142.5 88 76.1
Nitab4.5_0000521g0090 Nicotiana tabacum HOM05D006090 ORTHO05D007600 1.6e-32 142.5 88 75.0
TWI36G1609 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 1.6e-32 142.5 88 75.0
Sed0025432 Sechium edule HOM05D006090 ORTHO05D007600 2.1e-32 142.1 88 76.1
Lj5g0019908 Lotus japonicus HOM05D006090 ORTHO05D007600 2.7e-32 141.7 88 75.0
Ca_06547_v3 Cicer arietinum L. HOM05D006090 ORTHO05D007600 3.5e-32 141.4 88 73.9
Peaxi162Scf01111g00025 Petunia axillaris HOM05D006090 ORTHO05D007600 3.5e-32 141.4 88 75.0
Os02g0749450 Oryza sativa ssp. japonica HOM05D006090 ORTHO05D007600 4.6e-32 141.0 88 73.9
Phvul.002G080700 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 4.6e-32 141.0 86 76.7
QL02p097583 Quercus lobata HOM05D006090 ORTHO05D007600 4.6e-32 141.0 86 80.2
Sp3g06170 Schrenkiella parvula HOM05D006090 ORTHO05D007600 4.6e-32 141.0 88 72.7
GSVIVG01028416001 Vitis vinifera HOM05D006090 ORTHO05D007600 4.6e-32 141.0 88 76.1
Zm00001eb059180 Zea mays HOM05D006090 ORTHO05D007600 6.0e-32 140.6 88 76.1
Lj1g0010865 Lotus japonicus HOM05D006090 ORTHO05D007600 7.8e-32 140.2 88 73.9
TWI75G0179 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 7.8e-32 140.2 88 73.9
ClCG10G009020 Citrullus lanatus HOM05D006090 ORTHO05D007600 1.0e-31 139.8 88 72.7
Duzib211G0371 Durio zibethinus HOM05D006090 ORTHO05D007600 1.0e-31 139.8 87 74.7
Lalb_Chr03g0041481 Lupinus albus HOM05D006090 ORTHO05D007600 1.0e-31 139.8 88 72.7
Thecc.01G220300 Theobroma cacao HOM05D006090 ORTHO05D007600 1.0e-31 139.8 87 75.9
Duzib211G0047 Durio zibethinus HOM05D006090 ORTHO05D007600 1.3e-31 139.4 87 74.7
BcaB04g21317 Brassica carinata HOM05D006090 ORTHO05D007600 1.7e-31 139.0 90 66.7
BcaC08g43006 Brassica carinata HOM05D006090 ORTHO05D007600 1.7e-31 139.0 89 73.0
C06p02550 Brassica napus HOM05D006090 ORTHO05D007600 1.7e-31 139.0 89 73.0
Eucgr.A02241 Eucalyptus grandis HOM05D006090 ORTHO05D007600 8.6e-31 136.7 88 75.0
BolC6t35383H Brassica oleracea HOM05D006090 ORTHO05D007600 1.9e-30 135.6 89 71.9
Aa31LG5G17800 Aethionema arabicum HOM05D006090 ORTHO05D007600 2.5e-30 135.2 87 69.0
BcaB07g33788 Brassica carinata HOM05D006090 ORTHO05D007600 4.3e-30 134.4 92 69.6
Phvul.002G081100 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 4.3e-30 134.4 83 77.1
PGR004G1711 Punica granatum HOM05D006090 ORTHO05D007600 5.6e-30 134.0 88 76.1
BNapus_Darmor_BZH_scaffold_109p00180 Brassica napus HOM05D006090 ORTHO05D007600 9.5e-30 133.3 90 66.7
Sed0016973 Sechium edule HOM05D006090 ORTHO05D007600 1.6e-29 132.5 86 70.9
PGSC0003DMG400022770 Solanum tuberosum HOM05D006090 ORTHO05D007600 1.1e-28 129.8 121 57.0
Cpa.g.sc71.6 Carica papaya HOM05D006090 ORTHO05D007600 4.0e-28 127.9 83 71.1
unitig_8.g4837 Utricularia gibba HOM05D006090 ORTHO05D007600 5.2e-28 127.5 88 70.5
Ciclev10023078m.g Citrus clementina HOM05D006090 ORTHO05D007600 2.6e-27 125.2 72 83.3
Haze_03967 Corylus avellana HOM05D006090 ORTHO05D007600 2.6e-27 125.2 95 68.4
HPP92_023706 Vanilla planifolia HOM05D006090 ORTHO05D007600 5.8e-27 124.0 87 66.7
arahy.Tifrunner.gnm1.ann1.7I8V6Q Arachis hypogaea HOM05D006090 ORTHO05D007600 8.3e-26 120.2 90 68.9
arahy.Tifrunner.gnm1.ann1.NKLH1V Arachis hypogaea HOM05D006090 ORTHO05D007600 1.1e-25 119.8 90 68.9
Medtr3g437420 Medicago truncatula HOM05D006090 ORTHO05D007600 3.2e-25 118.2 70 78.6
Cpa.g.sc428.3 Carica papaya HOM05D006090 ORTHO05D007600 5.4e-25 117.5 70 77.1
Rhsim13G0047700 Rhododendron simsii HOM05D006090 ORTHO05D007600 7.1e-25 117.1 71 83.1
MELO3C026729.2 Cucumis melo HOM05D006090 ORTHO05D007600 2.1e-24 115.5 70 78.6
Duzib138G1257 Durio zibethinus HOM05D006090 ORTHO05D007600 2.1e-24 115.5 69 78.3
Actinidia30052 Actinidia chinensis HOM05D006090 ORTHO05D007600 7.8e-24 113.6 66 81.8
Lj2C1126T3 Lonicera japonica HOM05D006090 ORTHO05D007600 6.6e-23 110.5 63 81.0
Phvul.009G016400 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 8.6e-23 110.2 66 78.8
BraA01t04392Z Brassica rapa HOM05D006090 ORTHO05D007600 7.3e-22 107.1 68 72.1
CDE02G0014 Ceratophyllum demersum HOM05D006090 ORTHO05D007600 4.7e-21 104.4 69 71.0
Eucgr.K03282 Eucalyptus grandis HOM05D006090 ORTHO05D007600 8.9e-20 100.1 55 85.5
Glyma.18G167500 Glycine max HOM05D006090 ORTHO05D007600 1.7e-18 95.9 70 62.9
Sabra02G0187100 Salix brachista HOM05D006090 ORTHO05D007600 2.2e-18 95.5 59 76.3
Haze_15253 Corylus avellana HOM05D006090 ORTHO05D007600 2.9e-18 95.1 77 66.2
CiPaw.02G023500 Carya illinoinensis HOM05D006090 ORTHO05D007600 3.8e-18 94.7 71 70.4
Mapoly0057s0028 Marchantia polymorpha HOM05D006090 ORTHO05D007600 5.4e-17 90.9 89 50.6
TAR633G0277 Trochodendron aralioides HOM05D006090 ORTHO05D007600 1.2e-16 89.7 49 87.8
Pp3c20_9690 Physcomitrium patens HOM05D006090 ORTHO05D007600 1.1e-12 76.6 91 41.8
AagrBONN_evm.TU.Sc2ySwM_228.829 Anthoceros agrestis HOM05D006090 ORTHO05D007600 1.5e-11 72.8 90 45.6
arahy.Tifrunner.gnm1.ann1.L6G805 Arachis hypogaea HOM05D006090 ORTHO05D007600 2.0e-11 72.4 53 67.9
Nitab4.5_0001873g0080 Nicotiana tabacum HOM05D006090 ORTHO05D007600 3.2e-09 65.1 45 68.9
AUR62016546 Chenopodium quinoa HOM05D006090 ORTHO05D007600 1.5e-06 56.2 51 52.9
arahy.Tifrunner.gnm1.ann1.DI5ISS Arachis hypogaea HOM05D006090 ORTHO05D038896 2.5e-06 55.5 41 68.3
Aa31LG11G3540 Aethionema arabicum HOM05D006090 ORTHO05D007600 9.6e-06 53.5 31 67.7


User provided reference genes

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