Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021934 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 1.5e-59 232.6 117 100.0
CSS0030281 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 7.4e-59 230.3 117 98.3
Actinidia32339 Actinidia chinensis HOM05D007268 ORTHO05D009152 2.7e-53 211.8 115 90.4
Rhsim13G0115400 Rhododendron simsii HOM05D007268 ORTHO05D009152 2.2e-47 192.2 117 82.9
Dinv32234 Davidia involucrata HOM05D007268 ORTHO05D009152 5.0e-47 191.0 116 79.3
vmacro03337 Vaccinium macrocarpon HOM05D007268 ORTHO05D009152 8.5e-47 190.3 117 82.1
Oeu030940.1 Olea europaea HOM05D007268 ORTHO05D009152 2.3e-44 182.2 116 76.7
Cfa000925 Carpinus fangiana HOM05D007268 ORTHO05D009152 3.0e-44 181.8 114 78.1
Manes.17G072200 Manihot esculenta HOM05D007268 ORTHO05D009152 7.5e-43 177.2 116 75.9
Duzib235G0597 Durio zibethinus HOM05D007268 ORTHO05D009152 2.8e-42 175.3 111 76.6
QL05p055849 Quercus lobata HOM05D007268 ORTHO05D009152 2.8e-42 175.3 111 79.3
Prupe.4G083100 Prunus persica HOM05D007268 ORTHO05D009152 4.1e-41 171.4 113 77.9
Atru.chr10.1171 Acer truncatum HOM05D007268 ORTHO05D009152 1.6e-40 169.5 114 73.7
Gohir.A10G042300 Gossypium hirsutum HOM05D007268 ORTHO05D009152 1.6e-40 169.5 111 73.0
Thecc.06G148000 Theobroma cacao HOM05D007268 ORTHO05D009152 1.6e-40 169.5 111 74.8
CAN.G42.16 Capsicum annuum HOM05D007268 ORTHO05D009152 2.0e-40 169.1 112 73.2
Gorai.011G045800 Gossypium raimondii HOM05D007268 ORTHO05D009152 2.0e-40 169.1 109 74.3
RcHm_v2.0_Chr5g0014441 Rosa chinensis HOM05D007268 ORTHO05D009152 2.7e-40 168.7 120 72.5
Gohir.D10G043200 Gossypium hirsutum HOM05D007268 ORTHO05D009152 3.5e-40 168.3 109 74.3
Solyc08g048540.2 Solanum lycopersicum HOM05D007268 ORTHO05D009152 3.5e-40 168.3 112 73.2
Duzib160G0929 Durio zibethinus HOM05D007268 ORTHO05D009152 4.5e-40 167.9 111 73.9
TPR.G26254 Trifolium pratense HOM05D007268 ORTHO05D009152 7.7e-40 167.2 104 79.8
Sopen08g010950 Solanum pennellii HOM05D007268 ORTHO05D009152 1.0e-39 166.8 110 73.6
Psat1g188600 Pisum sativum HOM05D007268 ORTHO05D009152 1.7e-39 166.0 114 73.7
CAN.G500.67 Capsicum annuum HOM05D007268 ORTHO05D009152 2.3e-39 165.6 112 73.2
Eucgr.E02425 Eucalyptus grandis HOM05D007268 ORTHO05D009152 2.3e-39 165.6 115 73.9
CiPaw.09G121900 Carya illinoinensis HOM05D007268 ORTHO05D009152 2.9e-39 165.2 108 75.9
PGSC0003DMG400029871 Solanum tuberosum HOM05D007268 ORTHO05D009152 2.9e-39 165.2 112 72.3
FvH4_3g05282 Fragaria vesca HOM05D007268 ORTHO05D009152 3.8e-39 164.9 122 71.3
TWI53G0467 Tripterygium wilfordii HOM05D007268 ORTHO05D009152 3.8e-39 164.9 113 72.6
Ah.04g158630 Amaranthus hybridus HOM05D007268 ORTHO05D009152 5.0e-39 164.5 118 66.9
AUR62006739 Chenopodium quinoa HOM05D007268 ORTHO05D009152 5.0e-39 164.5 118 69.5
Ciclev10017240m.g Citrus clementina HOM05D007268 ORTHO05D009152 5.0e-39 164.5 114 69.3
MD05G1281500 Malus domestica HOM05D007268 ORTHO05D009152 5.0e-39 164.5 110 76.4
Atru.chr4.1816 Acer truncatum HOM05D007268 ORTHO05D009152 8.6e-39 163.7 114 71.9
Hund21552 Selenicereus undatus HOM05D007268 ORTHO05D009152 1.1e-38 163.3 107 70.1
MSTRG.7499 Avicennia marina HOM05D007268 ORTHO05D009152 1.9e-38 162.5 115 68.7
Aqoxy4G02868 Aquilegia oxysepala HOM05D007268 ORTHO05D009152 2.5e-38 162.2 101 77.2
BcaNung02699 Brassica carinata HOM05D007268 ORTHO05D009152 3.3e-38 161.8 117 70.1
C07p49660 Brassica napus HOM05D007268 ORTHO05D009152 3.3e-38 161.8 117 70.1
BolC7t45467H Brassica oleracea HOM05D007268 ORTHO05D009152 3.3e-38 161.8 117 70.1
Ca_00530_v3 Cicer arietinum L. HOM05D007268 ORTHO05D009152 4.2e-38 161.4 113 74.3
ECA236G4633 Erigeron canadensis HOM05D007268 ORTHO05D009152 4.2e-38 161.4 108 68.5
Nn3g20236 Nelumbo nucifera HOM05D007268 ORTHO05D009152 4.2e-38 161.4 99 79.8
THA.LOC104798395 Tarenaya hassleriana HOM05D007268 ORTHO05D009152 4.2e-38 161.4 117 70.9
SGA_v2.0_scaffold1G00193 Striga asiatica HOM05D007268 ORTHO05D009152 5.5e-38 161.0 100 75.0
BraA03t14206Z Brassica rapa HOM05D007268 ORTHO05D009152 7.2e-38 160.6 117 68.4
Sp7g15690 Schrenkiella parvula HOM05D007268 ORTHO05D009152 7.2e-38 160.6 115 73.0
A03p51230 Brassica napus HOM05D007268 ORTHO05D009152 9.5e-38 160.2 114 69.3
CiPaw.10G090400 Carya illinoinensis HOM05D007268 ORTHO05D009152 9.5e-38 160.2 111 73.0
Thhalv10026609m.g Eutrema salsugineum HOM05D007268 ORTHO05D009152 9.5e-38 160.2 115 72.2
Lsat_1_v5_gn_7_27661 Lactuca sativa HOM05D007268 ORTHO05D009152 9.5e-38 160.2 92 80.4
MBI02_g20985_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 9.5e-38 160.2 106 73.6
BcaC06g30594 Brassica carinata HOM05D007268 ORTHO05D009152 1.2e-37 159.8 114 71.1
BcaNung00009 Brassica carinata HOM05D007268 ORTHO05D009152 1.2e-37 159.8 114 71.1
Medtr2g019100 Medicago truncatula HOM05D007268 ORTHO05D009152 1.2e-37 159.8 112 73.2
Aa31LG6G1080 Aethionema arabicum HOM05D007268 ORTHO05D009152 1.6e-37 159.5 118 67.8
BcaC06g30591 Brassica carinata HOM05D007268 ORTHO05D009152 1.6e-37 159.5 117 68.4
FAN25G0109 Fragaria x ananassa HOM05D007268 ORTHO05D009152 1.6e-37 159.5 122 67.2
Sc24g0001710 Simmondsia chinensis HOM05D007268 ORTHO05D009152 2.1e-37 159.1 116 69.0
unitig_92.g28163 Utricularia gibba HOM05D007268 ORTHO05D009152 2.1e-37 159.1 114 64.9
BcaC09g51527 Brassica carinata HOM05D007268 ORTHO05D009152 3.6e-37 158.3 98 77.6
A01p10290 Brassica napus HOM05D007268 ORTHO05D009152 4.7e-37 157.9 104 75.0
BraA01t00976Z Brassica rapa HOM05D007268 ORTHO05D009152 4.7e-37 157.9 104 75.0
Glyma.13G219500 Glycine max HOM05D007268 ORTHO05D009152 6.1e-37 157.5 92 80.4
Sed0026056 Sechium edule HOM05D007268 ORTHO05D009152 6.1e-37 157.5 111 68.5
C01p12240 Brassica napus HOM05D007268 ORTHO05D009152 8.0e-37 157.1 98 77.6
BolC1t01200H Brassica oleracea HOM05D007268 ORTHO05D009152 8.0e-37 157.1 98 77.6
Migut.M00895 Erythranthe guttata HOM05D007268 ORTHO05D009152 8.0e-37 157.1 117 65.8
AL7G36000 Arabidopsis lyrata HOM05D007268 ORTHO05D009152 1.0e-36 156.8 117 69.2
CARHR225150 Cardamine hirsuta HOM05D007268 ORTHO05D009152 1.4e-36 156.4 114 68.4
Lalb_Chr18g0055321 Lupinus albus HOM05D007268 ORTHO05D009152 1.4e-36 156.4 100 76.0
Potri.015G138100 Populus trichocarpa HOM05D007268 ORTHO05D009152 1.4e-36 156.4 102 71.6
Carub.0007s2291 Capsella rubella HOM05D007268 ORTHO05D009152 2.3e-36 155.6 112 71.4
CsaV3_1G004630 Cucumis sativus L. HOM05D007268 ORTHO05D009152 2.3e-36 155.6 111 69.4
Sabra15G0149200 Salix brachista HOM05D007268 ORTHO05D009152 2.3e-36 155.6 114 67.5
AT4G18372 Arabidopsis thaliana HOM05D007268 ORTHO05D009152 5.2e-36 154.5 115 68.7
ClCG03G006700 Citrullus lanatus HOM05D007268 ORTHO05D009152 8.9e-36 153.7 111 69.4
DCAR_003898 Daucus carota HOM05D007268 ORTHO05D009152 2.6e-35 152.1 115 65.2
PGR031G1097 Punica granatum HOM05D007268 ORTHO05D009152 2.6e-35 152.1 101 72.3
unitig_37.g12097 Utricularia gibba HOM05D007268 ORTHO05D009152 3.4e-35 151.8 114 65.8
Phvul.006G166200 Phaseolus vulgaris HOM05D007268 ORTHO05D009152 4.4e-35 151.4 109 68.8
HanXRQChr04g0115721 Helianthus annuus HOM05D007268 ORTHO05D009152 1.3e-34 149.8 77 88.3
GSVIVG01035542001 Vitis vinifera HOM05D007268 ORTHO05D009152 3.1e-33 145.2 76 88.2
SalBow8G1886 Salvia bowleyana HOM05D007268 ORTHO05D009152 4.1e-33 144.8 76 86.8
CANSAT21G2169 Cannabis sativa HOM05D007268 ORTHO05D009152 2.0e-32 142.5 111 64.0
Solyc08g048520.1 Solanum lycopersicum HOM05D007268 ORTHO05D009152 2.0e-32 142.5 94 71.3
PSO541G1787 Papaver somniferum HOM05D007268 ORTHO05D009152 3.5e-32 141.7 115 65.2
FAN16G0810 Fragaria x ananassa HOM05D007268 ORTHO05D009152 1.0e-31 140.2 107 71.0
Cc09_g08780 Coffea canephora HOM05D007268 ORTHO05D009152 8.6e-31 137.1 76 82.9
EL10Ac4g09469 Beta vulgaris HOM05D007268 ORTHO05D009152 4.3e-30 134.8 79 77.2
MBI02_g43299_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 4.3e-30 134.8 76 81.6
ATR0618G449 Amborella trichopoda HOM05D007268 ORTHO05D009152 1.2e-29 133.3 92 68.5
Os06g0677600 Oryza sativa ssp. japonica HOM05D007268 ORTHO05D009152 1.2e-29 133.3 93 66.7
Zm00001eb273860 Zea mays HOM05D007268 ORTHO05D009152 1.8e-28 129.4 90 67.8
FAN21G3321 Fragaria x ananassa HOM05D007268 ORTHO05D009152 2.3e-28 129.0 100 71.0
HPP92_004157 Vanilla planifolia HOM05D007268 ORTHO05D009152 4.0e-28 128.3 87 67.8
Zm00001eb224700 Zea mays HOM05D007268 ORTHO05D009152 8.9e-28 127.1 107 59.8
arahy.Tifrunner.gnm1.ann1.H0S66A Arachis hypogaea HOM05D007268 ORTHO05D009152 1.7e-26 122.9 91 68.1
SEGI_36221 Sequoiadendron giganteum HOM05D007268 ORTHO05D009152 1.2e-24 116.7 113 54.9
Pp3c2_29020 Physcomitrium patens HOM05D007268 ORTHO05D009152 8.6e-23 110.5 102 50.0
Mapoly0012s0147 Marchantia polymorpha HOM05D007268 ORTHO05D009152 6.2e-21 104.4 131 45.0
SMO358G0115 Selaginella moellendorffii HOM05D007268 ORTHO05D009152 6.8e-20 100.9 87 54.0
Nitab4.5_0005488g0010 Nicotiana tabacum HOM05D007268 ORTHO05D009152 8.3e-18 94.0 110 51.8
SHI24845 Sapria himalayana HOM05D007268 ORTHO05D009152 1.6e-16 89.7 76 56.6
CBR_g29441 Chara braunii HOM05D007268 ORTHO05D009152 7.8e-16 87.4 111 41.4
PRCOL_00005812 Prasinoderma coloniale HOM05D007268 ORTHO05D009152 1.7e-10 69.7 96 41.7
QL05p056380 Quercus lobata HOM05D005741 ORTHO05D007240 2.5e-06 55.8 36 77.8
MCO15G665 Micromonas commoda HOM05D007268 ORTHO05D009152 7.3e-06 54.3 75 37.3


User provided reference genes

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