Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021925 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 6.5e-103 377.5 203 100.0
CSS0013123 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 6.8e-92 340.9 203 92.6
CSS0032446 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 3.7e-90 335.1 203 91.6
CSS0008827 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 6.3e-90 334.3 193 90.2
CSS0006348 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.2e-83 313.5 194 89.7
CSS0007245 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 6.8e-76 287.7 203 75.9
CSS0033613 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.0e-75 286.2 203 81.8
CSS0001693 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 7.5e-75 284.3 204 72.5
CSS0000671 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.3e-74 283.5 205 76.6
CSS0008461 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 3.5e-72 275.4 201 74.1
CSS0009704 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 3.5e-72 275.4 203 74.9
CSS0011935 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.7e-64 249.2 193 71.5
CSS0008468 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.4e-57 226.1 112 96.4
CSS0014991 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 5.6e-54 214.9 156 84.0
CSS0015212 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 4.2e-49 198.7 204 60.3
CSS0009631 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.8e-45 186.0 207 52.7
CSS0005018 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 3.7e-37 159.1 126 63.5
CSS0027810 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.2e-35 154.1 204 46.6
CSS0009699 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.8e-28 130.2 194 44.3
RhsimUnG0235700 Rhododendron simsii HOM05D008623 ORTHO05D007789 8.4e-26 121.3 186 44.1
Rhsim03G0082100 Rhododendron simsii HOM05D008623 ORTHO05D007789 6.5e-18 95.1 181 38.1
PGR083G2854 Punica granatum HOM05D008623 ORTHO05D007789 7.9e-16 88.2 114 41.2
Rhsim02G0175700 Rhododendron simsii HOM05D008623 ORTHO05D007789 1.4e-15 87.4 157 39.5
PGR083G1822 Punica granatum HOM05D008623 ORTHO05D007789 1.5e-14 84.0 114 41.2
PGR083G2548 Punica granatum HOM05D008623 ORTHO05D007789 9.7e-14 81.3 114 40.4
QL10p030102 Quercus lobata HOM05D019990 ORTHO05D007789 2.8e-13 79.7 140 40.7
Sed0001543 Sechium edule HOM05D008623 ORTHO05D007789 2.8e-13 79.7 135 35.6
Sed0025575 Sechium edule HOM05D008623 ORTHO05D007789 1.1e-12 77.8 125 36.8
QL10p030090 Quercus lobata HOM05D019990 ORTHO05D007789 4.1e-12 75.9 140 40.7
QL10p030388 Quercus lobata HOM05D019990 ORTHO05D007789 4.1e-12 75.9 145 39.3
QL10p030420 Quercus lobata HOM05D019990 ORTHO05D007789 5.3e-12 75.5 127 40.2
Dinv01175 Davidia involucrata HOM05D008623 ORTHO05D007789 6.9e-12 75.1 119 39.5
QL10p030347 Quercus lobata HOM05D019990 ORTHO05D007789 2.0e-11 73.6 145 38.6
Dinv41634 Davidia involucrata HOM05D008623 ORTHO05D007789 4.5e-11 72.4 119 37.8
Sed0015244 Sechium edule HOM05D008623 ORTHO05D007789 4.5e-11 72.4 128 34.4
Dinv41569 Davidia involucrata HOM05D008623 ORTHO05D007789 7.7e-11 71.6 128 39.8
Rhsim12G0026200 Rhododendron simsii HOM05D010787 ORTHO05D011812 7.7e-11 71.6 128 35.9
TWI36G0009 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 1.3e-10 70.9 131 30.5
Rhsim10G0165100 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.7e-10 70.5 106 40.6
PGR142G1144 Punica granatum HOM05D008623 ORTHO05D007789 2.2e-10 70.1 109 33.9
Hma1.2p1_0785F.1_g217500 Hydrangea macrophylla HOM05D008623 ORTHO05D007789 2.9e-10 69.7 132 33.3
CiPaw.10G106000 Carya illinoinensis HOM05D010787 ORTHO05D011812 3.8e-10 69.3 144 38.2
Nitab4.5_0000043g0040 Nicotiana tabacum HOM05D008744 ORTHO05D010647 8.5e-10 68.2 172 29.1
Actinidia14014 Actinidia chinensis HOM05D008623 ORTHO05D010647 1.1e-09 67.8 133 36.8
CiPaw.10G108400 Carya illinoinensis HOM05D010787 ORTHO05D011812 1.1e-09 67.8 127 39.4
Nitab4.5_0000043g0070 Nicotiana tabacum HOM05D008744 ORTHO05D010647 1.1e-09 67.8 134 32.1
Duzib187G0243 Durio zibethinus HOM05D016489 ORTHO05D007789 3.2e-09 66.2 137 36.5
Nitab4.5_0000556g0070 Nicotiana tabacum HOM05D010354 ORTHO05D012840 5.5e-09 65.5 141 31.9
Rhsim10G0206900 Rhododendron simsii HOM05D009663 ORTHO05D007789 7.2e-09 65.1 124 32.3
Actinidia04665 Actinidia chinensis HOM05D008623 ORTHO05D010647 1.2e-08 64.3 114 37.7
TWI36G0661 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 2.1e-08 63.5 134 32.1
Dinv04048 Davidia involucrata HOM05D000041 ORTHO05D019419 2.7e-08 63.2 99 39.4
PGR142G3708 Punica granatum HOM05D008623 ORTHO05D007789 2.7e-08 63.2 107 33.6
RhsimUnG0120400 Rhododendron simsii HOM05D009663 ORTHO05D007789 2.7e-08 63.2 109 34.9
vmacro16961 Vaccinium macrocarpon HOM05D009663 ORTHO05D007789 2.7e-08 63.2 108 37.0
Dinv36278 Davidia involucrata HOM05D000519 ORTHO05D001210 4.7e-08 62.4 138 33.3
CiPaw.10G039400 Carya illinoinensis HOM05D010787 ORTHO05D011812 1.0e-07 61.2 130 33.8
Rhsim10G0207200 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.0e-07 61.2 138 30.4
PGSC0003DMG402009490 Solanum tuberosum HOM05D010354 ORTHO05D012840 1.0e-07 61.2 130 31.5
Peaxi162Scf00700g00238 Petunia axillaris HOM05D008744 ORTHO05D010647 1.4e-07 60.8 112 37.5
Rhsim04G0228600 Rhododendron simsii HOM05D009663 ORTHO05D011812 2.3e-07 60.1 109 33.0
Sopen09g005440 Solanum pennellii HOM05D008744 ORTHO05D010647 3.0e-07 59.7 92 39.1
Sopen09g005480 Solanum pennellii HOM05D008744 ORTHO05D010647 3.0e-07 59.7 92 39.1
Medtr3g082340 Medicago truncatula HOM05D009148 ORTHO05D011895 3.9e-07 59.3 136 38.2
Medtr3g082420 Medicago truncatula HOM05D009148 ORTHO05D011895 3.9e-07 59.3 136 38.2
Nitab4.5_0002593g0040 Nicotiana tabacum HOM05D008744 ORTHO05D010647 3.9e-07 59.3 136 32.4
Rhsim06G0038100 Rhododendron simsii HOM05D038451 ORTHO05D007789 3.9e-07 59.3 121 28.9
TWI73G0112 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 3.9e-07 59.3 122 34.4
arahy.Tifrunner.gnm1.ann1.B6M36H Arachis hypogaea HOM05D010841 ORTHO05D007789 8.8e-07 58.2 130 33.8
Lj1A777T20 Lonicera japonica HOM05D011954 ORTHO05D014236 8.8e-07 58.2 146 32.9
Rhsim04G0228800 Rhododendron simsii HOM05D009663 ORTHO05D011812 8.8e-07 58.2 110 33.6
arahy.Tifrunner.gnm1.ann1.52E6WN Arachis hypogaea HOM05D010841 ORTHO05D007789 1.5e-06 57.4 130 33.8
Carub.0002s0170 Capsella rubella HOM05D007210 ORTHO05D006152 1.5e-06 57.4 97 34.0
Rhsim12G0199400 Rhododendron simsii HOM05D009663 ORTHO05D007789 1.5e-06 57.4 106 34.0
Sed0015950 Sechium edule HOM05D034586 ORTHO05D007789 2.0e-06 57.0 134 32.1
TWI73G0560 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 2.0e-06 57.0 121 33.9
TWI73G1234 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 2.0e-06 57.0 121 33.9
Peaxi162Scf00045g00629 Petunia axillaris HOM05D010354 ORTHO05D012840 3.3e-06 56.2 128 35.2
AL304U10030 Arabidopsis lyrata HOM05D004201 ORTHO05D011677 4.4e-06 55.8 139 29.5
COL.COLO4_08085 Corchorus olitorius HOM05D016489 ORTHO05D007789 4.4e-06 55.8 121 35.5
RhsimUnG0120300 Rhododendron simsii HOM05D009663 ORTHO05D007789 4.4e-06 55.8 107 33.6
TWI36G0611 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 4.4e-06 55.8 117 33.3
CAN.G762.6 Capsicum annuum HOM05D008623 ORTHO05D007789 5.7e-06 55.5 113 35.4
Dinv41577 Davidia involucrata HOM05D008623 ORTHO05D007789 5.7e-06 55.5 96 37.5
AL2G12320 Arabidopsis lyrata HOM05D007210 ORTHO05D006152 7.4e-06 55.1 110 33.6
C03p93270 Brassica napus HOM05D007210 ORTHO05D006152 7.4e-06 55.1 124 36.3
BolC3t21625H Brassica oleracea HOM05D007210 ORTHO05D006152 7.4e-06 55.1 124 36.3
Migut.F00817 Erythranthe guttata HOM05D020956 ORTHO05D015643 7.4e-06 55.1 75 36.0
Lj1A773T40 Lonicera japonica HOM05D011954 ORTHO05D014236 7.4e-06 55.1 146 32.2
vmacro13892 Vaccinium macrocarpon HOM05D000906 ORTHO05D000713 7.4e-06 55.1 132 31.1
CSS0001720 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 9.7e-06 54.7 118 33.1
Lj1A778T39 Lonicera japonica HOM05D011954 ORTHO05D014236 9.7e-06 54.7 146 32.2
Lj1A786G23 Lonicera japonica HOM05D011954 ORTHO05D014236 9.7e-06 54.7 130 30.8


User provided reference genes

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