Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021921 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 6.3e-45 183.7 92 100.0
CSS0004734 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.8e-21 104.4 62 87.1
CSS0001174 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.5e-19 97.8 63 77.8
CSS0001345 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.5e-19 97.8 63 77.8
CSS0013307 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.5e-19 97.8 63 77.8
CSS0017826 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.5e-19 97.8 63 77.8
CSS0026447 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.5e-19 97.8 63 77.8
CSS0026772 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.5e-19 97.8 63 77.8
CSS0049921 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.5e-19 97.8 63 77.8
CSS0003769 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.8e-18 94.7 63 74.6
CSS0004443 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.9e-17 92.4 63 73.0
CSS0032723 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.9e-17 92.4 88 60.2
CSS0047120 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 5.5e-17 90.9 63 71.4
CSS0004685 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.4e-12 75.5 63 58.7
CSS0008205 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.1e-12 75.1 63 58.7
CSS0021747 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.1e-12 75.1 63 58.7
CSS0022173 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.1e-12 75.1 63 58.7
CSS0029753 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.1e-12 75.1 63 58.7
CSS0031004 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.1e-12 75.1 63 58.7
CSS0034332 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.1e-12 75.1 63 58.7
CSS0045394 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.1e-12 75.1 63 58.7
CSS0047376 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.1e-12 75.1 63 58.7
CSS0003759 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 7.0e-12 73.9 63 57.1
CSS0038208 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.6e-11 72.8 63 55.6
CSS0033268 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.5e-11 71.2 63 57.1
Rhsim05G0212100 Rhododendron simsii HOM05D007798 ORTHO05D009882 3.8e-10 68.2 46 65.2
Rhsim11G0007300 Rhododendron simsii HOM05D007798 ORTHO05D009882 3.8e-10 68.2 46 65.2
Rhsim02G0017800 Rhododendron simsii HOM05D007798 ORTHO05D009882 5.0e-10 67.8 46 63.0
Rhsim06G0104000 Rhododendron simsii HOM05D007798 ORTHO05D009882 4.3e-09 64.7 46 63.0
Rhsim11G0003100 Rhododendron simsii HOM05D007798 ORTHO05D009882 4.3e-09 64.7 46 60.9
Rhsim11G0017600 Rhododendron simsii HOM05D007798 ORTHO05D009882 4.3e-09 64.7 46 60.9
Rhsim05G0032900 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.8e-08 62.0 46 60.9
RhsimUnG0063700 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.8e-08 62.0 46 60.9
CSS0035454 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D015543 3.6e-08 61.6 44 61.4
Rhsim02G0157700 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.6e-08 61.6 46 58.7
Rhsim09G0076000 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.6e-08 61.6 46 60.9
Rhsim01G0156700 Rhododendron simsii HOM05D007798 ORTHO05D009882 4.7e-08 61.2 45 60.0
Rhsim11G0057000 Rhododendron simsii HOM05D007798 ORTHO05D009882 6.1e-08 60.8 45 62.2
RhsimUnG0041700 Rhododendron simsii HOM05D007798 ORTHO05D009882 8.0e-08 60.5 46 58.7
Rhsim03G0114400 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.0e-07 60.1 45 62.2
Rhsim09G0073700 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.4e-07 59.7 43 65.1
Rhsim06G0120600 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.3e-07 58.9 46 58.7
Rhsim02G0156600 Rhododendron simsii HOM05D007798 ORTHO05D009882 3.0e-07 58.5 44 59.1
Rhsim06G0076200 Rhododendron simsii HOM05D000107 ORTHO05D009882 3.0e-07 58.5 45 60.0
Rhsim03G0060900 Rhododendron simsii HOM05D007798 ORTHO05D009882 6.8e-07 57.4 45 57.8
Rhsim01G0063300 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.2e-06 56.6 43 62.8
Rhsim01G0150700 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.5e-06 56.2 39 66.7


User provided reference genes

Program Settings