Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021917 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 1.0e-223 779.6 373 100.0
CSS0002377 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 4.7e-131 471.9 246 94.3
Rhsim12G0166600 Rhododendron simsii HOM05D007081 ORTHO05D008834 2.7e-94 349.7 328 58.5
Lj5A128T65 Lonicera japonica HOM05D007081 ORTHO05D008834 7.6e-81 305.1 376 47.6
vmacro16631 Vaccinium macrocarpon HOM05D007081 ORTHO05D008834 9.9e-81 304.7 262 63.7
Dinv38554 Davidia involucrata HOM05D007081 ORTHO05D008834 1.9e-79 300.4 271 59.0
CiPaw.11G022400 Carya illinoinensis HOM05D007081 ORTHO05D008834 1.9e-76 290.4 347 51.0
GSVIVG01007682001 Vitis vinifera HOM05D007081 ORTHO05D008834 8.7e-69 265.0 330 48.5
Cfa019177 Carpinus fangiana HOM05D007081 ORTHO05D008834 3.1e-66 256.5 359 44.3
CANSAT80G0092 Cannabis sativa HOM05D007081 ORTHO05D008834 1.1e-63 248.1 369 43.9
TWI39G1151 Tripterygium wilfordii HOM05D007081 ORTHO05D008834 1.9e-63 247.3 364 42.6
Gohir.D02G120200 Gossypium hirsutum HOM05D007081 ORTHO05D008834 7.1e-63 245.4 356 44.4
Haze_07555 Corylus avellana HOM05D007081 ORTHO05D008834 9.3e-63 245.0 330 44.5
TAR629G3400 Trochodendron aralioides HOM05D007081 ORTHO05D008834 1.2e-62 244.6 337 45.7
Gorai.005G133700 Gossypium raimondii HOM05D007081 ORTHO05D008834 1.6e-62 244.2 356 44.1
QL10p008493 Quercus lobata HOM05D007081 ORTHO05D008834 1.9e-60 237.3 358 43.3
QL10p008625 Quercus lobata HOM05D007081 ORTHO05D008834 1.9e-60 237.3 358 43.3
Sc04g0001640 Simmondsia chinensis HOM05D007081 ORTHO05D008834 4.8e-59 232.6 335 46.3
THA.LOC104809251 Tarenaya hassleriana HOM05D007081 ORTHO05D008834 1.1e-58 231.5 362 41.2
Thecc.03G023800 Theobroma cacao HOM05D007081 ORTHO05D008834 1.4e-58 231.1 372 41.4
DCAR_016469 Daucus carota HOM05D007081 ORTHO05D008834 4.5e-57 226.1 343 44.0
MD14G1175400 Malus domestica HOM05D007081 ORTHO05D008834 5.8e-57 225.7 271 49.1
Cc04_g12600 Coffea canephora HOM05D007081 ORTHO05D008834 1.3e-56 224.6 296 45.9
Cpa.g.sc35.77 Carica papaya HOM05D007081 ORTHO05D008834 6.5e-56 222.2 286 47.6
Glyma.04G186500 Glycine max HOM05D007081 ORTHO05D008834 5.5e-55 219.2 371 39.1
Sed0005220 Sechium edule HOM05D007081 ORTHO05D008834 7.1e-55 218.8 344 42.4
Nitab4.5_0010304g0020 Nicotiana tabacum HOM05D007081 ORTHO05D008834 6.0e-54 215.7 285 42.8
CSS0048681 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 1.8e-53 214.2 124 87.1
Eucgr.K02814 Eucalyptus grandis HOM05D007081 ORTHO05D008834 1.8e-53 214.2 342 42.1
Solyc03g112510.2 Solanum lycopersicum HOM05D007081 ORTHO05D008834 1.1e-52 211.5 265 45.7
Sopen03g031570 Solanum pennellii HOM05D007081 ORTHO05D008834 1.5e-52 211.1 265 45.7
PGSC0003DMG400018175 Solanum tuberosum HOM05D007081 ORTHO05D008834 1.5e-52 211.1 298 41.3
PGR044G1978 Punica granatum HOM05D007081 ORTHO05D008834 1.9e-52 210.7 323 41.2
Lsat_1_v5_gn_1_28080 Lactuca sativa HOM05D007081 ORTHO05D008834 2.5e-52 210.3 289 42.6
arahy.Tifrunner.gnm1.ann1.G5F0QK Arachis hypogaea HOM05D007081 ORTHO05D008834 4.3e-52 209.5 350 40.3
Oeu040853.3 Olea europaea HOM05D007081 ORTHO05D008834 9.7e-52 208.4 393 36.9
CSS0004033 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 1.6e-51 207.6 133 76.7
FvH4_5g05850 Fragaria vesca HOM05D007081 ORTHO05D008834 1.6e-51 207.6 319 42.6
RcHm_v2.0_Chr7g0192971 Rosa chinensis HOM05D007081 ORTHO05D008834 8.2e-51 205.3 351 40.5
ECA247G4072 Erigeron canadensis HOM05D007081 ORTHO05D008834 1.8e-50 204.1 283 43.8
HanXRQChr04g0101311 Helianthus annuus HOM05D007081 ORTHO05D008834 1.8e-50 204.1 325 41.8
Peaxi162Scf00089g01519 Petunia axillaris HOM05D007081 ORTHO05D008834 1.8e-50 204.1 214 52.3
Duzib205G1440 Durio zibethinus HOM05D007081 ORTHO05D008834 3.1e-50 203.4 400 37.5
arahy.Tifrunner.gnm1.ann1.4N1ELM Arachis hypogaea HOM05D007081 ORTHO05D008834 4.1e-50 203.0 350 39.4
CAN.G338.9 Capsicum annuum HOM05D007081 ORTHO05D008834 2.0e-49 200.7 324 39.5
Manes.14G062600 Manihot esculenta HOM05D007081 ORTHO05D008834 4.5e-49 199.5 317 41.0
Phvul.009G175500 Phaseolus vulgaris HOM05D007081 ORTHO05D008834 5.9e-49 199.1 307 42.0
FAN08G1021 Fragaria x ananassa HOM05D007081 ORTHO05D008834 1.7e-48 197.6 218 51.4
Lalb_Chr11g0070341 Lupinus albus HOM05D007081 ORTHO05D008834 1.7e-48 197.6 322 40.1
Migut.O00134 Erythranthe guttata HOM05D007081 ORTHO05D008834 5.0e-48 196.1 254 43.3
SGA_v2.0_scaffold90G27870 Striga asiatica HOM05D007081 ORTHO05D008834 1.9e-47 194.1 223 47.5
Lj1g0004270 Lotus japonicus HOM05D007081 ORTHO05D008834 9.4e-47 191.8 394 36.0
Gohir.A03G091750 Gossypium hirsutum HOM05D007081 ORTHO05D008834 6.1e-46 189.1 289 42.2
Ciclev10023760m.g Citrus clementina HOM05D007081 ORTHO05D008834 1.4e-45 188.0 325 42.5
Sp7g31890 Schrenkiella parvula HOM05D007081 ORTHO05D008834 3.9e-45 186.4 309 39.8
TPR.G31056 Trifolium pratense HOM05D007081 ORTHO05D008834 5.1e-45 186.0 360 36.9
BraA01t00418Z Brassica rapa HOM05D007081 ORTHO05D008834 1.5e-44 184.5 309 40.1
MBI10_g32034_MAGBIO Magnolia biondii HOM05D007081 ORTHO05D008834 1.5e-44 184.5 219 50.7
Ca_16151_v3 Cicer arietinum L. HOM05D007081 ORTHO05D008834 1.9e-44 184.1 314 40.4
A01p04290 Brassica napus HOM05D007081 ORTHO05D008834 7.4e-44 182.2 309 39.8
Ah.02g110780 Amaranthus hybridus HOM05D007081 ORTHO05D008834 2.2e-43 180.6 295 38.0
FAN18G1088 Fragaria x ananassa HOM05D007081 ORTHO05D008834 2.2e-43 180.6 304 39.1
Sabra02G0160000 Salix brachista HOM05D007081 ORTHO05D008834 8.2e-43 178.7 300 41.0
Potri.002G197500 Populus trichocarpa HOM05D007081 ORTHO05D008834 2.4e-42 177.2 310 40.3
Carub.0007s0626 Capsella rubella HOM05D007081 ORTHO05D008834 9.1e-42 175.3 312 39.4
Thhalv10025133m.g Eutrema salsugineum HOM05D007081 ORTHO05D008834 2.6e-41 173.7 310 38.4
Aa31LG2G16580 Aethionema arabicum HOM05D007081 ORTHO05D008834 4.5e-41 172.9 268 41.0
AL7G17230 Arabidopsis lyrata HOM05D007081 ORTHO05D008834 4.5e-41 172.9 309 37.9
AT4G34140 Arabidopsis thaliana HOM05D007081 ORTHO05D008834 4.5e-41 172.9 314 40.1
Aqoxy3G02825 Aquilegia oxysepala HOM05D007081 ORTHO05D008834 5.9e-41 172.6 240 43.8
Psat0s2597g0120 Pisum sativum HOM05D007081 ORTHO05D008834 7.7e-41 172.2 292 38.0
Zm00001eb122970 Zea mays HOM05D007081 ORTHO05D008834 1.0e-40 171.8 316 36.1
ClCG06G017230 Citrullus lanatus HOM05D007081 ORTHO05D008834 2.9e-40 170.2 377 35.0
Prupe.5G169300 Prunus persica HOM05D007081 ORTHO05D008834 6.5e-40 169.1 250 45.2
CsaV3_1G001260 Cucumis sativus L. HOM05D007081 ORTHO05D008834 7.2e-39 165.6 304 37.8
AUR62008170 Chenopodium quinoa HOM05D007081 ORTHO05D008834 9.4e-39 165.2 220 45.0
Medtr3g077300 Medicago truncatula HOM05D007081 ORTHO05D008834 2.1e-38 164.1 294 37.1
CSS0035417 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 1.0e-37 161.8 77 98.7
Hund02770 Selenicereus undatus HOM05D007081 ORTHO05D008834 1.0e-37 161.8 359 34.5
CDE06G1300 Ceratophyllum demersum HOM05D007081 ORTHO05D008834 8.8e-37 158.7 234 44.9
EL10Ac5g10689 Beta vulgaris HOM05D007081 ORTHO05D008834 2.6e-36 157.1 285 36.5
C01p04690 Brassica napus HOM05D007081 ORTHO05D008834 3.3e-36 156.8 309 36.2
BolC1t00453H Brassica oleracea HOM05D007081 ORTHO05D008834 3.3e-36 156.8 309 36.2
PSO063G2349 Papaver somniferum HOM05D007081 ORTHO05D008834 2.2e-35 154.1 279 39.1
unitig_26.g9614 Utricularia gibba HOM05D007081 ORTHO05D008834 2.6e-33 147.1 164 48.2
PSO832G3615 Papaver somniferum HOM05D007081 ORTHO05D008834 3.8e-32 143.3 256 38.3
Nitab4.5_0001284g0100 Nicotiana tabacum HOM05D007081 ORTHO05D008834 5.0e-32 142.9 129 57.4
HPP92_000312 Vanilla planifolia HOM05D007081 ORTHO05D008834 1.4e-31 141.4 246 37.0
MELO3C026274.2 Cucumis melo HOM05D007081 ORTHO05D008834 2.5e-31 140.6 364 33.8
ATR1152G054 Amborella trichopoda HOM05D007081 ORTHO05D008834 7.2e-31 139.0 247 40.9
AUR62028747 Chenopodium quinoa HOM05D007081 ORTHO05D008834 1.3e-27 128.3 125 54.4
HPP92_000303 Vanilla planifolia HOM05D007081 ORTHO05D008834 3.7e-27 126.7 223 39.0
COL.COLO4_30124 Corchorus olitorius HOM05D007081 ORTHO05D008834 1.1e-26 125.2 251 36.3
Os01g0170100 Oryza sativa ssp. japonica HOM05D007081 ORTHO05D008834 1.1e-26 125.2 140 47.9
FAN04G1276 Fragaria x ananassa HOM05D007081 ORTHO05D008834 1.6e-25 121.3 216 39.8
SEGI_13994 Sequoiadendron giganteum HOM05D007081 ORTHO05D008834 1.2e-22 111.7 233 33.0
Glyma.06G179301 Glycine max HOM05D007081 ORTHO05D008834 6.1e-22 109.4 137 46.7
HPP92_000296 Vanilla planifolia HOM05D007081 ORTHO05D008834 6.3e-19 99.4 243 32.5
AagrBONN_evm.TU.Sc2ySwM_117.2172 Anthoceros agrestis HOM05D007081 ORTHO05D008834 2.4e-18 97.4 387 24.5
Oeu015893.1 Olea europaea HOM05D007081 ORTHO05D008834 2.0e-17 94.4 213 37.1
Nitab4.5_0022301g0010 Nicotiana tabacum HOM05D007081 ORTHO05D008834 3.2e-15 87.0 115 42.6
Pp3c25_4990 Physcomitrium patens HOM05D007081 ORTHO05D008834 1.2e-14 85.1 132 37.1
Mapoly0102s0046 Marchantia polymorpha HOM05D007081 ORTHO05D008834 4.7e-14 83.2 131 39.7
CAN.G12.29 Capsicum annuum HOM05D001989 ORTHO05D000346 1.5e-12 78.2 193 32.6
CBR_g4092 Chara braunii HOM05D007081 ORTHO05D000048 8.3e-11 72.4 137 35.0
CARHR242710 Cardamine hirsuta HOM05D007081 ORTHO05D008834 1.0e-08 65.5 36 83.3


User provided reference genes

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