Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021914 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 2.2e-221 771.9 368 100.0
CSS0022527 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 4.4e-214 747.7 368 97.3
Dinv41871 Davidia involucrata HOM05D005203 ORTHO05D006383 5.7e-182 641.0 387 80.1
CSS0012413 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 2.0e-179 632.5 387 78.6
Dinv14173 Davidia involucrata HOM05D005203 ORTHO05D006383 5.9e-179 630.9 420 74.5
Thecc.02G146000 Theobroma cacao HOM05D005203 ORTHO05D006383 2.3e-175 619.0 387 76.0
CiPaw.06G115500 Carya illinoinensis HOM05D005203 ORTHO05D006383 7.5e-174 614.0 387 74.9
Prupe.8G179800 Prunus persica HOM05D005203 ORTHO05D006383 1.4e-172 609.8 387 76.0
Lj1g0021981 Lotus japonicus HOM05D005203 ORTHO05D006383 9.2e-172 607.1 387 74.9
Potri.004G206900 Populus trichocarpa HOM05D005203 ORTHO05D006383 4.6e-171 604.7 387 73.6
MSTRG.19946 Avicennia marina HOM05D005203 ORTHO05D006383 6.0e-171 604.4 387 73.9
Potri.009G168000 Populus trichocarpa HOM05D005203 ORTHO05D006383 6.0e-171 604.4 387 73.9
Glyma.04G000400 Glycine max HOM05D005203 ORTHO05D006383 1.3e-170 603.2 387 74.2
Migut.B00006 Erythranthe guttata HOM05D005203 ORTHO05D006383 6.6e-170 600.9 388 72.7
Glyma.06G000300 Glycine max HOM05D005203 ORTHO05D006383 8.6e-170 600.5 387 74.2
Solyc01g112240.4 Solanum lycopersicum HOM05D005203 ORTHO05D006383 8.6e-170 600.5 387 72.9
Gohir.D12G014000 Gossypium hirsutum HOM05D005203 ORTHO05D006383 1.5e-169 599.7 387 72.1
Cc09_g10810 Coffea canephora HOM05D005203 ORTHO05D006383 4.3e-169 598.2 396 73.5
Sed0018804 Sechium edule HOM05D005203 ORTHO05D006383 9.5e-169 597.0 388 72.7
CANSAT25G3783 Cannabis sativa HOM05D005203 ORTHO05D006383 2.1e-168 595.9 387 73.9
Gohir.A12G013200 Gossypium hirsutum HOM05D005203 ORTHO05D006383 2.8e-168 595.5 387 71.6
TWI75G1664 Tripterygium wilfordii HOM05D005203 ORTHO05D006383 2.8e-168 595.5 387 73.4
Peaxi162Scf00362g00132 Petunia axillaris HOM05D005203 ORTHO05D006383 6.2e-168 594.3 401 72.6
MELO3C013249.2 Cucumis melo HOM05D005203 ORTHO05D006383 8.1e-168 594.0 388 71.6
Ciclev10028418m.g Citrus clementina HOM05D005203 ORTHO05D006383 1.1e-167 593.6 387 72.6
PGR042G0992 Punica granatum HOM05D005203 ORTHO05D006383 1.4e-167 593.2 388 73.2
Gorai.008G014000 Gossypium raimondii HOM05D005203 ORTHO05D006383 2.3e-167 592.4 388 71.4
GSVIVG01002028001 Vitis vinifera HOM05D005203 ORTHO05D006383 2.3e-167 592.4 387 74.7
CsaV3_7G001910 Cucumis sativus L. HOM05D005203 ORTHO05D006383 5.2e-167 591.3 388 71.4
Aqoxy5G00999 Aquilegia oxysepala HOM05D005203 ORTHO05D006383 6.8e-167 590.9 387 73.1
Nn6g31681 Nelumbo nucifera HOM05D005203 ORTHO05D006383 8.9e-167 590.5 387 72.6
Manes.11G110000 Manihot esculenta HOM05D005203 ORTHO05D006383 9.9e-166 587.0 387 72.1
Ca_15273_v3 Cicer arietinum L. HOM05D005203 ORTHO05D006383 1.3e-165 586.6 387 72.6
PSO210G4213 Papaver somniferum HOM05D005203 ORTHO05D006383 3.7e-165 585.1 387 72.1
Eucgr.H04989 Eucalyptus grandis HOM05D005203 ORTHO05D006383 4.9e-165 584.7 387 72.1
FvH4_2g16770 Fragaria vesca HOM05D005203 ORTHO05D006383 6.4e-165 584.3 387 72.1
MD10G1141600 Malus domestica HOM05D005203 ORTHO05D006383 2.4e-164 582.4 387 73.4
Sc18g0005820 Simmondsia chinensis HOM05D005203 ORTHO05D006383 3.2e-164 582.0 387 70.5
PSO170G2598 Papaver somniferum HOM05D005203 ORTHO05D006383 7.1e-164 580.9 387 71.6
TPR.G38553 Trifolium pratense HOM05D005203 ORTHO05D006383 1.2e-163 580.1 387 71.8
Phvul.009G115600 Phaseolus vulgaris HOM05D005203 ORTHO05D006383 6.0e-163 577.8 387 71.3
Eucgr.L00584 Eucalyptus grandis HOM05D005203 ORTHO05D006383 1.7e-162 576.2 344 77.0
FAN15G3115 Fragaria x ananassa HOM05D005203 ORTHO05D006383 2.3e-162 575.9 387 71.1
ECA246G3822 Erigeron canadensis HOM05D005203 ORTHO05D006383 3.9e-162 575.1 352 75.6
ECA234G1180 Erigeron canadensis HOM05D005203 ORTHO05D006383 5.1e-162 574.7 388 70.4
Cfa005369 Carpinus fangiana HOM05D005203 ORTHO05D006383 1.9e-161 572.8 387 71.8
Psat5g000480 Pisum sativum HOM05D005203 ORTHO05D006383 3.3e-161 572.0 352 75.9
Atru.chr5.3533 Acer truncatum HOM05D005203 ORTHO05D006383 4.3e-161 571.6 352 76.4
MD05G1138700 Malus domestica HOM05D005203 ORTHO05D006383 1.2e-160 570.1 387 71.8
Carub.0007s0018 Capsella rubella HOM05D005203 ORTHO05D006383 2.1e-160 569.3 387 70.0
Sp7g37480 Schrenkiella parvula HOM05D005203 ORTHO05D006383 2.4e-159 565.8 387 69.5
THA.LOC104824732 Tarenaya hassleriana HOM05D005203 ORTHO05D006383 3.1e-159 565.5 388 69.6
AT4G38240 Arabidopsis thaliana HOM05D005203 ORTHO05D006383 6.8e-159 564.3 387 70.0
RcHm_v2.0_Chr6g0280891 Rosa chinensis HOM05D005203 ORTHO05D006383 2.6e-158 562.4 387 70.3
HanXRQChr15g0476431 Helianthus annuus HOM05D005203 ORTHO05D006383 1.3e-157 560.1 354 74.9
AL7G10160 Arabidopsis lyrata HOM05D005203 ORTHO05D006383 6.4e-157 557.8 366 72.4
CARHR294030 Cardamine hirsuta HOM05D005203 ORTHO05D006383 1.1e-156 557.0 367 71.4
HanXRQChr10g0298431 Helianthus annuus HOM05D005203 ORTHO05D006383 1.4e-156 556.6 392 69.1
MBI05_g33297_MAGBIO Magnolia biondii HOM05D005203 ORTHO05D006383 1.9e-156 556.2 387 71.1
Lsat_1_v5_gn_4_71380 Lactuca sativa HOM05D005203 ORTHO05D006383 4.1e-156 555.1 387 68.2
ClCG02G003410 Citrullus lanatus HOM05D005203 ORTHO05D006383 7.1e-156 554.3 393 68.4
FAN27G1508 Fragaria x ananassa HOM05D005203 ORTHO05D006383 2.1e-155 552.7 383 70.2
Lsat_1_v5_gn_3_48560 Lactuca sativa HOM05D005203 ORTHO05D006383 3.5e-155 552.0 387 69.8
Nitab4.5_0000783g0090 Nicotiana tabacum HOM05D005203 ORTHO05D006383 7.3e-153 544.3 413 66.8
BolC7t46794H Brassica oleracea HOM05D005203 ORTHO05D006383 6.2e-152 541.2 387 66.7
Lalb_Chr08g0246871 Lupinus albus HOM05D005203 ORTHO05D006383 1.1e-151 540.4 387 69.0
CiPaw.05G093000 Carya illinoinensis HOM05D005203 ORTHO05D006383 1.4e-151 540.0 390 69.0
Actinidia20576 Actinidia chinensis HOM05D005203 ORTHO05D006383 6.9e-151 537.7 367 71.7
arahy.Tifrunner.gnm1.ann1.H6WGQ1 Arachis hypogaea HOM05D005203 ORTHO05D006383 1.7e-149 533.1 389 68.1
Os02g0832800 Oryza sativa ssp. japonica HOM05D005203 ORTHO05D006383 2.2e-149 532.7 389 65.8
FAN24G3349 Fragaria x ananassa HOM05D005203 ORTHO05D006383 4.9e-149 531.6 383 68.4
Haze_02001 Corylus avellana HOM05D005203 ORTHO05D006383 8.4e-149 530.8 349 74.2
Oeu006117.1 Olea europaea HOM05D005203 ORTHO05D006383 4.2e-148 528.5 349 73.1
BraA06t27778Z Brassica rapa HOM05D005203 ORTHO05D006383 1.2e-147 526.9 408 63.5
Zm00001eb421090 Zea mays HOM05D005203 ORTHO05D006383 4.6e-147 525.0 354 70.3
SMO201G0157 Selaginella moellendorffii HOM05D005203 ORTHO05D006383 6.0e-147 524.6 378 66.9
BNapus_Darmor_BZH_scaffold_146p00070 Brassica napus HOM05D005203 ORTHO05D006383 1.0e-146 523.9 395 64.6
Thhalv10025208m.g Eutrema salsugineum HOM05D005203 ORTHO05D006383 1.0e-146 523.9 387 65.4
vmacro02339 Vaccinium macrocarpon HOM05D005203 ORTHO05D006383 2.1e-139 499.6 551 51.4
SalBow1G5214 Salvia bowleyana HOM05D005203 ORTHO05D006383 1.3e-136 490.3 368 66.8
arahy.Tifrunner.gnm1.ann1.Z16TJ0 Arachis hypogaea HOM05D005203 ORTHO05D006383 3.8e-133 478.8 389 63.0
Aa31LG6G16700 Aethionema arabicum HOM05D005203 ORTHO05D006383 4.9e-133 478.4 362 65.5
Cpa.g.c28580 Carica papaya HOM05D005203 ORTHO05D006383 7.1e-132 474.6 387 61.8
BcaNung01996 Brassica carinata HOM05D005203 ORTHO05D006383 1.5e-129 466.8 393 61.6
Cfa005368 Carpinus fangiana HOM05D005203 ORTHO05D006383 6.9e-127 458.0 338 68.3
HPP92_022155 Vanilla planifolia HOM05D005203 ORTHO05D006383 8.4e-125 451.1 366 59.3
Mapoly0041s0049 Marchantia polymorpha HOM05D005203 ORTHO05D006383 8.7e-122 441.0 383 56.1
Pp3c22_17330 Physcomitrium patens HOM05D005203 ORTHO05D006383 1.1e-121 440.7 391 56.8
AagrBONN_evm.TU.Sc2ySwM_362.2915 Anthoceros agrestis HOM05D005203 ORTHO05D006383 1.9e-121 439.9 379 58.8
Pp3c12_4490 Physcomitrium patens HOM05D005203 ORTHO05D006383 7.4e-121 438.0 328 61.9
SGA_v2.0_scaffold399G50809 Striga asiatica HOM05D005203 ORTHO05D006383 5.5e-116 421.8 388 58.2
DCAR_026076 Daucus carota HOM05D005203 ORTHO05D006383 6.1e-115 418.3 358 62.6
Sabra09G0130500 Salix brachista HOM05D005203 ORTHO05D006383 7.9e-115 417.9 386 57.8
CBR_g40811 Chara braunii HOM05D005203 ORTHO05D006383 2.3e-106 389.8 338 53.0
Sabra04G0139200 Salix brachista HOM05D005203 ORTHO05D006383 3.9e-106 389.0 390 53.3
AUR62013174 Chenopodium quinoa HOM05D005203 ORTHO05D006383 1.1e-105 387.5 353 58.1
HPP92_004948 Vanilla planifolia HOM05D005203 ORTHO05D006383 1.4e-103 380.6 387 52.5
Rhsim11G0198000 Rhododendron simsii HOM05D005203 ORTHO05D006383 8.0e-99 364.8 328 60.4
Aa31LG1G14200 Aethionema arabicum HOM05D005203 ORTHO05D006383 3.9e-98 362.5 380 51.8
Lj5A171G136 Lonicera japonica HOM05D005203 ORTHO05D006383 1.8e-95 353.6 231 73.6
QL11p056319 Quercus lobata HOM05D005203 ORTHO05D006383 8.5e-93 344.7 231 72.7
Sopen01g054300 Solanum pennellii HOM05D005203 ORTHO05D006383 2.7e-91 339.7 231 70.6
TAR376G0977 Trochodendron aralioides HOM05D005203 ORTHO05D006383 4.0e-90 335.9 387 48.6
VMungo1309G0298 Vigna mungo HOM05D005203 ORTHO05D006383 1.5e-89 334.0 231 68.8
PGSC0003DMG402014680 Solanum tuberosum HOM05D005203 ORTHO05D006383 3.3e-89 332.8 210 75.7
CAN.G1725.2 Capsicum annuum HOM05D005203 ORTHO05D006383 1.7e-88 330.5 210 75.2
Medtr3g118520 Medicago truncatula HOM05D005203 ORTHO05D006383 4.8e-88 328.9 231 68.8
AUR62010173 Chenopodium quinoa HOM05D005203 ORTHO05D006383 3.1e-87 326.2 348 51.1
CSS0033501 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 3.5e-86 322.8 171 94.2
CSS0046634 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 3.5e-86 322.8 171 94.2
CSS0007702 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 1.1e-84 317.8 162 96.3
COL.COLO4_19776 Corchorus olitorius HOM05D005203 ORTHO05D006383 1.1e-84 317.8 387 49.1
CDE07G0143 Ceratophyllum demersum HOM05D005203 ORTHO05D006383 1.6e-83 313.9 232 65.5
TAR628G1330 Trochodendron aralioides HOM05D005203 ORTHO05D006383 8.0e-83 311.6 366 48.4
ATR0807G194 Amborella trichopoda HOM05D005203 ORTHO05D006383 7.5e-81 305.1 232 65.5
MCO10G329 Micromonas commoda HOM05D005203 ORTHO05D006383 2.8e-80 303.1 338 46.4
Hund06364 Selenicereus undatus HOM05D005203 ORTHO05D006383 2.7e-78 296.6 332 49.4
EL10Ac9g21529 Beta vulgaris HOM05D005203 ORTHO05D006383 3.0e-74 283.1 387 44.2
Eucgr.L00583 Eucalyptus grandis HOM05D005203 ORTHO05D006383 1.5e-65 254.2 152 78.9
Ah.01g009970 Amaranthus hybridus HOM05D005203 ORTHO05D006383 1.9e-60 237.3 187 63.6
ATR0807G110 Amborella trichopoda HOM05D005203 ORTHO05D006383 1.2e-57 228.0 152 67.1
QL11p056323 Quercus lobata HOM05D005203 ORTHO05D006383 2.6e-49 200.3 123 75.6
Medtr3g118525 Medicago truncatula HOM05D005203 ORTHO05D006383 2.2e-48 197.2 126 74.6
Eucgr.H04987 Eucalyptus grandis HOM05D005203 ORTHO05D006383 7.1e-47 192.2 126 69.0
VMungo1309G1049 Vigna mungo HOM05D005203 ORTHO05D006383 5.1e-45 186.0 126 68.3
Lj5A171G135 Lonicera japonica HOM05D005203 ORTHO05D006383 1.1e-42 178.3 127 70.1
MCO01G683 Micromonas commoda HOM05D005203 ORTHO05D006383 4.0e-42 176.4 265 36.2
CDE07G2075 Ceratophyllum demersum HOM05D005203 ORTHO05D006383 5.8e-41 172.6 123 61.8
GSVIVG01002907001 Vitis vinifera HOM05D005203 ORTHO05D006383 6.4e-40 169.1 95 83.2
Nitab4.5_0010601g0030 Nicotiana tabacum HOM05D005203 ORTHO05D006383 1.5e-36 157.9 174 52.9
AL7G13060 Arabidopsis lyrata HOM05D005203 ORTHO05D006383 1.7e-29 134.4 98 67.3
Sc18g0005790 Simmondsia chinensis HOM05D005203 ORTHO05D006383 6.6e-29 132.5 101 62.4
Sed0000358 Sechium edule HOM05D005203 ORTHO05D006383 4.5e-25 119.8 109 54.1
CANSAT78G0806 Cannabis sativa HOM05D005203 ORTHO05D006383 1.3e-24 118.2 75 76.0
PGSC0003DMG403014680 Solanum tuberosum HOM05D005203 ORTHO05D006383 8.4e-24 115.5 79 67.1
SEGI_16108 Sequoiadendron giganteum HOM05D005203 ORTHO05D006383 3.2e-15 87.0 73 57.5
CAN.G533.11 Capsicum annuum HOM05D005203 ORTHO05D006383 1.3e-13 81.6 55 65.5
AL6G14740 Arabidopsis lyrata HOM05D005203 ORTHO05D006383 1.1e-12 78.6 45 80.0
EL10Ac1g01043 Beta vulgaris HOM05D005203 ORTHO05D006383 2.0e-09 67.8 31 87.1


User provided reference genes

Program Settings