Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021882 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 4.8e-102 374.4 177 100.0
CSS0046965 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.1e-57 226.1 127 83.5
CSS0033025 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.5e-50 202.6 187 58.3
CSS0045334 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.5e-50 202.6 190 57.4
CSS0001231 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 3.3e-50 202.2 190 56.8
CSS0041437 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 7.3e-50 201.1 190 57.4
CSS0041327 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.2e-49 200.3 190 57.4
CSS0033950 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.1e-49 199.5 190 57.4
CSS0003542 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.8e-49 199.1 190 56.8
CSS0000891 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 3.6e-49 198.7 190 57.4
CSS0027060 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 4.7e-49 198.4 190 56.8
CSS0028601 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.2e-49 198.0 190 56.3
CSS0004182 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 3.4e-47 192.2 176 59.7
CSS0010423 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 3.6e-41 172.2 154 60.4
CSS0046119 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.4e-40 169.5 134 65.7
CSS0005185 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 9.0e-40 167.5 130 66.2
CSS0013618 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 9.0e-40 167.5 130 64.6
CSS0016088 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 9.0e-40 167.5 130 66.2
CSS0040160 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 9.0e-40 167.5 130 66.2
CSS0042015 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 9.0e-40 167.5 130 66.2
CSS0007522 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 4.4e-39 165.2 130 65.4
CSS0042028 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 7.6e-39 164.5 87 87.4
CSS0001339 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.3e-38 163.7 130 64.6
CSS0008214 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.3e-38 163.7 130 65.4
CSS0044969 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 4.9e-38 161.8 130 63.8
CSS0018539 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.1e-37 160.6 148 58.8
CSS0043211 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.4e-37 159.5 100 78.0
CSS0035884 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.2e-36 157.1 100 77.0
CSS0004427 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 4.6e-36 155.2 100 76.0
CSS0039183 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.3e-35 153.7 100 75.0
CSS0034170 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.3e-35 152.9 100 75.0
CSS0011826 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.6e-35 151.4 100 74.0
CSS0026535 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.5e-26 123.6 97 66.0
CSS0037011 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 9.3e-21 104.4 63 74.6
CSS0009064 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.7e-19 98.2 61 73.8
CSS0030489 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 6.2e-17 91.7 91 54.9
CSS0002173 Camellia sinensis var. sinensis HOM05D001315 ORTHO05D001618 1.4e-13 80.5 37 86.5
Rhsim09G0115800 Rhododendron simsii HOM05D005012 ORTHO05D005886 1.6e-12 77.0 118 39.0
CSS0025035 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 2.7e-12 76.3 34 100.0
CSS0023747 Camellia sinensis var. sinensis HOM05D001315 ORTHO05D001618 1.8e-11 73.6 39 82.1
RcHm_v2.0_Chr7g0222641 Rosa chinensis HOM05D005012 ORTHO05D005886 1.8e-11 73.6 108 39.8
Rhsim07G0133200 Rhododendron simsii HOM05D005012 ORTHO05D005886 2.3e-11 73.2 165 32.7
Actinidia07878 Actinidia chinensis HOM05D007219 ORTHO05D008995 3.9e-11 72.4 34 94.1
vmacro12114 Vaccinium macrocarpon HOM05D007219 ORTHO05D008995 8.7e-11 71.2 34 94.1
CiPaw.03G278000 Carya illinoinensis HOM05D007219 ORTHO05D008995 4.3e-10 68.9 34 88.2
Cc07_g19250 Coffea canephora HOM05D007219 ORTHO05D008995 4.3e-10 68.9 34 88.2
Rhsim05G0112900 Rhododendron simsii HOM05D005012 ORTHO05D005886 4.3e-10 68.9 118 36.4
CSS0019248 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 7.4e-10 68.2 64 46.9
Hma1.2p1_0133F.1_g061230 Hydrangea macrophylla HOM05D007219 ORTHO05D008995 9.7e-10 67.8 34 85.3
TAR626G0546 Trochodendron aralioides HOM05D007219 ORTHO05D008995 9.7e-10 67.8 34 85.3
MBI16_g42309_MAGBIO Magnolia biondii HOM05D007219 ORTHO05D008995 1.6e-09 67.0 34 79.4
QL08p028873 Quercus lobata HOM05D007219 ORTHO05D008995 1.6e-09 67.0 34 82.4
CAN.G716.12 Capsicum annuum HOM05D007219 ORTHO05D008995 4.8e-09 65.5 34 82.4
RcHm_v2.0_Chr2g0156861 Rosa chinensis HOM05D007219 ORTHO05D008995 4.8e-09 65.5 34 82.4
Peaxi162Scf00147g01822 Petunia axillaris HOM05D007219 ORTHO05D008995 6.3e-09 65.1 34 82.4
Sopen05g025870 Solanum pennellii HOM05D007219 ORTHO05D008995 6.3e-09 65.1 34 82.4
Dinv07849 Davidia involucrata HOM05D007219 ORTHO05D008995 8.2e-09 64.7 34 85.3
MD09G1120700 Malus domestica HOM05D007219 ORTHO05D008995 1.4e-08 63.9 34 79.4
Nn1g03266 Nelumbo nucifera HOM05D007219 ORTHO05D008995 1.4e-08 63.9 34 73.5
Hund24148 Selenicereus undatus HOM05D007219 ORTHO05D008995 1.4e-08 63.9 34 76.5
RcHm_v2.0_Chr6g0273901 Rosa chinensis HOM05D005012 ORTHO05D005886 1.8e-08 63.5 104 35.6
Migut.M00020 Erythranthe guttata HOM05D007219 ORTHO05D008995 2.4e-08 63.2 34 79.4
PGSC0003DMG400020758 Solanum tuberosum HOM05D007219 ORTHO05D008995 2.4e-08 63.2 34 79.4
FvH4_6g41300 Fragaria vesca HOM05D007219 ORTHO05D008995 3.1e-08 62.8 34 76.5
FAN02G0754 Fragaria x ananassa HOM05D007219 ORTHO05D008995 3.1e-08 62.8 34 76.5
Prupe.3G202800 Prunus persica HOM05D007219 ORTHO05D008995 3.1e-08 62.8 34 79.4
SGA_v2.0_scaffold73G24522 Striga asiatica HOM05D007219 ORTHO05D008995 3.1e-08 62.8 34 79.4
SalBow7G0564 Salvia bowleyana HOM05D007219 ORTHO05D008995 4.1e-08 62.4 34 82.4
ATR0712G058 Amborella trichopoda HOM05D007219 ORTHO05D008995 5.3e-08 62.0 34 73.5
FAN14G1895 Fragaria x ananassa HOM05D007219 ORTHO05D008995 5.3e-08 62.0 34 76.5
Glyma.13G025700 Glycine max HOM05D007219 ORTHO05D008995 6.9e-08 61.6 34 76.5
QL08p028923 Quercus lobata HOM05D007219 ORTHO05D008995 6.9e-08 61.6 33 78.8
Cpa.g.sc395.3 Carica papaya HOM05D007219 ORTHO05D008995 9.0e-08 61.2 34 79.4
Dinv05845 Davidia involucrata HOM05D007219 ORTHO05D008995 9.0e-08 61.2 34 82.4
ECA234G4660 Erigeron canadensis HOM05D007219 ORTHO05D008995 9.0e-08 61.2 34 76.5
Nitab4.5_0011106g0020 Nicotiana tabacum HOM05D007219 ORTHO05D008995 9.0e-08 61.2 34 79.4
CANSAT64G0298 Cannabis sativa HOM05D007219 ORTHO05D008995 1.2e-07 60.8 34 73.5
GSVIVG01030037001 Vitis vinifera HOM05D007219 ORTHO05D008995 1.2e-07 60.8 34 79.4
Aqoxy1G04023 Aquilegia oxysepala HOM05D007219 ORTHO05D008995 1.5e-07 60.5 34 73.5
Duzib138G0301 Durio zibethinus HOM05D007219 ORTHO05D008995 1.5e-07 60.5 34 76.5
Lalb_Chr22g0360881 Lupinus albus HOM05D007219 ORTHO05D008995 1.5e-07 60.5 34 73.5
Manes.12G083700 Manihot esculenta HOM05D007219 ORTHO05D008995 1.5e-07 60.5 34 73.5
Sabra14G0123400 Salix brachista HOM05D007219 ORTHO05D008995 1.5e-07 60.5 34 76.5
Lsat_1_v5_gn_5_121560 Lactuca sativa HOM05D007219 ORTHO05D008995 2.0e-07 60.1 34 70.6
CSS0009225 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.6e-07 59.7 29 86.2
COL.COLO4_04268 Corchorus olitorius HOM05D007219 ORTHO05D008995 2.6e-07 59.7 34 76.5
Potri.014G161800 Populus trichocarpa HOM05D007219 ORTHO05D008995 2.6e-07 59.7 34 73.5
Rhsim01G0079300 Rhododendron simsii HOM05D005012 ORTHO05D005886 2.6e-07 59.7 82 42.7
vmacro22380 Vaccinium macrocarpon HOM05D005012 ORTHO05D005886 2.6e-07 59.7 65 38.5
AL3G42440 Arabidopsis lyrata HOM05D007219 ORTHO05D008995 3.4e-07 59.3 34 70.6
MSTRG.14930 Avicennia marina HOM05D007219 ORTHO05D008995 3.4e-07 59.3 34 76.5
Oeu029809.1 Olea europaea HOM05D007219 ORTHO05D008995 3.4e-07 59.3 34 76.5
Carub.0003s2645 Capsella rubella HOM05D007219 ORTHO05D008995 4.5e-07 58.9 34 70.6
CARHR102840 Cardamine hirsuta HOM05D007219 ORTHO05D008995 4.5e-07 58.9 34 70.6
Lj6g0005071 Lotus japonicus HOM05D007219 ORTHO05D008995 4.5e-07 58.9 34 70.6
AT2G04845 Arabidopsis thaliana HOM05D007219 ORTHO05D008995 5.9e-07 58.5 34 73.5
CsaV3_7G002720 Cucumis sativus L. HOM05D007219 ORTHO05D008995 5.9e-07 58.5 34 79.4
Sp3g23430 Schrenkiella parvula HOM05D007219 ORTHO05D008995 7.7e-07 58.2 34 67.6
Ciclev10016673m.g Citrus clementina HOM05D007219 ORTHO05D008995 1.0e-06 57.8 34 73.5
MELO3C024213.2 Cucumis melo HOM05D007219 ORTHO05D008995 1.0e-06 57.8 34 79.4
RcHm_v2.0_Chr2g0138651 Rosa chinensis HOM05D005012 ORTHO05D005886 1.0e-06 57.8 92 38.0
Sed0018447 Sechium edule HOM05D007219 ORTHO05D008995 1.0e-06 57.8 34 79.4
BolC3t17801H Brassica oleracea HOM05D007219 ORTHO05D008995 1.3e-06 57.4 34 67.6
CDE10G1006 Ceratophyllum demersum HOM05D007219 ORTHO05D008995 1.3e-06 57.4 34 67.6
Phvul.006G013300 Phaseolus vulgaris HOM05D007219 ORTHO05D008995 1.3e-06 57.4 34 73.5
Aa31LG1G4150 Aethionema arabicum HOM05D002708 ORTHO05D003516 1.7e-06 57.0 34 67.6
arahy.Tifrunner.gnm1.ann1.E78GDQ Arachis hypogaea HOM05D007219 ORTHO05D008995 1.7e-06 57.0 34 70.6
arahy.Tifrunner.gnm1.ann1.XZ9N91 Arachis hypogaea HOM05D007219 ORTHO05D008995 1.7e-06 57.0 34 70.6
FvH4_6g37930 Fragaria vesca HOM05D005012 ORTHO05D005886 1.7e-06 57.0 109 32.1
FAN16G2537 Fragaria x ananassa HOM05D005012 ORTHO05D005886 2.2e-06 56.6 124 32.3
RcHm_v2.0_Chr1g0346721 Rosa chinensis HOM05D005012 ORTHO05D005886 2.2e-06 56.6 112 37.5
Duzib133G0547 Durio zibethinus HOM05D007219 ORTHO05D008995 2.9e-06 56.2 34 70.6
Rhsim01G0158900 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.9e-06 56.2 81 40.7
FAN11G2763 Fragaria x ananassa HOM05D005012 ORTHO05D008319 3.8e-06 55.8 109 32.1
HanXRQChr12g0373931 Helianthus annuus HOM05D007219 ORTHO05D008995 3.8e-06 55.8 34 73.5
Rhsim01G0079900 Rhododendron simsii HOM05D005012 ORTHO05D005886 3.8e-06 55.8 82 41.5
Rhsim07G0081300 Rhododendron simsii HOM05D000074 ORTHO05D002343 3.8e-06 55.8 70 42.9
Sc21g0000880 Simmondsia chinensis HOM05D007219 ORTHO05D008995 3.8e-06 55.8 34 70.6
Haze_12702 Corylus avellana HOM05D007219 ORTHO05D008995 5.0e-06 55.5 54 51.9
Thhalv10002661m.g Eutrema salsugineum HOM05D007219 ORTHO05D008995 5.0e-06 55.5 34 64.7
TWI36G0002 Tripterygium wilfordii HOM05D007219 ORTHO05D008995 5.0e-06 55.5 34 73.5
arahy.Tifrunner.gnm1.ann1.N6EW4G Arachis hypogaea HOM05D007219 ORTHO05D008995 6.5e-06 55.1 34 67.6
CSS0049721 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.5e-06 55.1 33 72.7
FAN26G2139 Fragaria x ananassa HOM05D005012 ORTHO05D005886 6.5e-06 55.1 124 28.2
Gohir.A07G167500 Gossypium hirsutum HOM05D007219 ORTHO05D008995 6.5e-06 55.1 34 70.6
THA.LOC104826618 Tarenaya hassleriana HOM05D007219 ORTHO05D008995 6.5e-06 55.1 34 67.6
CSS0002139 Camellia sinensis var. sinensis HOM05D001342 ORTHO05D001286 8.5e-06 54.7 28 82.1
CSS0008479 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D109742 8.5e-06 54.7 29 82.8
CSS0036042 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 8.5e-06 54.7 30 76.7
FAN04G2098 Fragaria x ananassa HOM05D005012 ORTHO05D005886 8.5e-06 54.7 115 32.2


User provided reference genes

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