Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021842 Camellia sinensis var. sinensis HOM05D000457 ORTHO05D008967 4.9e-33 144.1 81 100.0
Dinv28392 Davidia involucrata HOM05D000457 ORTHO05D003394 1.4e-24 115.9 76 81.6
Dinv41815 Davidia involucrata HOM05D000457 ORTHO05D008967 4.6e-23 110.9 76 78.9
Cc02_g02450 Coffea canephora HOM05D000457 ORTHO05D008967 3.9e-22 107.8 76 77.6
Actinidia34151 Actinidia chinensis HOM05D000457 ORTHO05D008967 8.6e-22 106.7 77 75.3
MD01G1207500 Malus domestica HOM05D000457 ORTHO05D008967 2.5e-21 105.1 80 68.8
Rhsim03G0190500 Rhododendron simsii HOM05D000457 ORTHO05D008967 2.5e-21 105.1 80 78.8
TAR374G0573 Trochodendron aralioides HOM05D000457 ORTHO05D008967 3.3e-21 104.8 80 71.2
Haze_00037 Corylus avellana HOM05D000457 ORTHO05D008967 7.3e-21 103.6 75 76.0
Ciclev10006167m.g Citrus clementina HOM05D000457 ORTHO05D008967 1.6e-20 102.4 76 71.1
MD07G1278200 Malus domestica HOM05D000457 ORTHO05D008967 1.6e-20 102.4 80 67.5
Cfa016281 Carpinus fangiana HOM05D000457 ORTHO05D008967 2.8e-20 101.7 75 74.7
Prupe.2G300100 Prunus persica HOM05D000457 ORTHO05D008967 2.8e-20 101.7 76 72.4
QL09p012992 Quercus lobata HOM05D000457 ORTHO05D008967 6.2e-20 100.5 75 73.3
CiPaw.06G002900 Carya illinoinensis HOM05D000457 ORTHO05D008967 8.0e-20 100.1 76 73.7
Thecc.03G183200 Theobroma cacao HOM05D000457 ORTHO05D008967 1.1e-19 99.8 75 74.7
Thecc.K0007400 Theobroma cacao HOM05D000457 ORTHO05D008967 1.1e-19 99.8 75 74.7
Hma1.2p1_0274F.1_g110210 Hydrangea macrophylla HOM05D000457 ORTHO05D008967 1.4e-19 99.4 76 75.0
Lj8C18T9 Lonicera japonica HOM05D000457 ORTHO05D008967 1.8e-19 99.0 78 75.6
vmacro06631 Vaccinium macrocarpon HOM05D000457 ORTHO05D008967 3.1e-19 98.2 80 72.5
Nn5g28157 Nelumbo nucifera HOM05D000457 ORTHO05D008967 5.2e-19 97.4 79 69.6
Lalb_Chr03g0034781 Lupinus albus HOM05D000457 ORTHO05D008967 1.2e-18 96.3 80 67.5
Duzib068G0228 Durio zibethinus HOM05D000457 ORTHO05D008967 3.4e-18 94.7 75 70.7
Manes.06G151800 Manihot esculenta HOM05D000457 ORTHO05D008967 5.8e-18 94.0 78 66.7
Eucgr.K00291 Eucalyptus grandis HOM05D000457 ORTHO05D008967 7.5e-18 93.6 75 68.0
Sabra04G0052800 Salix brachista HOM05D000457 ORTHO05D008967 9.8e-18 93.2 76 67.1
GSVIVG01028871001 Vitis vinifera HOM05D000457 ORTHO05D008967 9.8e-18 93.2 75 66.7
QL09p013029 Quercus lobata HOM05D000457 ORTHO05D008967 1.3e-17 92.8 75 70.7
FAN01G0381 Fragaria x ananassa HOM05D000457 ORTHO05D008967 1.7e-17 92.4 77 64.9
MBI18_g45289_MAGBIO Magnolia biondii HOM05D000457 ORTHO05D008967 1.7e-17 92.4 75 69.3
TPR.G33500 Trifolium pratense HOM05D000457 ORTHO05D008967 2.2e-17 92.0 76 63.2
FAN03G1511 Fragaria x ananassa HOM05D000457 ORTHO05D008967 2.9e-17 91.7 77 63.6
CANSAT11G1185 Cannabis sativa HOM05D000457 ORTHO05D008967 3.7e-17 91.3 77 63.6
FvH4_7g30160 Fragaria vesca HOM05D000457 ORTHO05D008967 4.9e-17 90.9 77 64.9
FAN06G1096 Fragaria x ananassa HOM05D000457 ORTHO05D008967 4.9e-17 90.9 77 64.9
MBI11_g04753_MAGBIO Magnolia biondii HOM05D000457 ORTHO05D008967 4.9e-17 90.9 75 68.0
Potri.004G079400 Populus trichocarpa HOM05D000457 ORTHO05D008967 4.9e-17 90.9 76 65.8
RcHm_v2.0_Chr1g0378211 Rosa chinensis HOM05D000457 ORTHO05D008967 4.9e-17 90.9 80 60.0
ClCG01G000950 Citrullus lanatus HOM05D000457 ORTHO05D008967 1.1e-16 89.7 79 64.6
Duzib084G1351 Durio zibethinus HOM05D000457 ORTHO05D008967 1.1e-16 89.7 74 68.9
Lj2g0015355 Lotus japonicus HOM05D000457 ORTHO05D008967 1.4e-16 89.4 77 66.2
Atru.chr1.382 Acer truncatum HOM05D000457 ORTHO05D008967 1.9e-16 89.0 81 64.2
Aqoxy7G00247 Aquilegia oxysepala HOM05D000457 ORTHO05D008967 1.9e-16 89.0 76 65.8
Ah.07g206630 Amaranthus hybridus HOM05D000457 ORTHO05D008967 3.2e-16 88.2 76 63.2
arahy.Tifrunner.gnm1.ann1.82SWC8 Arachis hypogaea HOM05D000457 ORTHO05D008967 3.2e-16 88.2 77 64.9
arahy.Tifrunner.gnm1.ann1.E24S63 Arachis hypogaea HOM05D000457 ORTHO05D008967 3.2e-16 88.2 77 64.9
AUR62021132 Chenopodium quinoa HOM05D000457 ORTHO05D003394 3.2e-16 88.2 76 64.5
AUR62031413 Chenopodium quinoa HOM05D000457 ORTHO05D008967 3.2e-16 88.2 76 64.5
Psat0s823g0040 Pisum sativum HOM05D000457 ORTHO05D008967 3.2e-16 88.2 76 59.2
Peaxi162Scf00444g00131 Petunia axillaris HOM05D000457 ORTHO05D008967 4.1e-16 87.8 75 66.7
Nitab4.5_0000084g0410 Nicotiana tabacum HOM05D000457 ORTHO05D008967 7.0e-16 87.0 75 65.3
COL.COLO4_10064 Corchorus olitorius HOM05D000457 ORTHO05D008967 1.6e-15 85.9 75 66.7
MELO3C005837.2 Cucumis melo HOM05D000457 ORTHO05D008967 1.6e-15 85.9 79 64.6
Nitab4.5_0000572g0130 Nicotiana tabacum HOM05D000457 ORTHO05D008967 1.6e-15 85.9 72 66.7
Glyma.16G179700 Glycine max HOM05D000457 ORTHO05D008967 2.0e-15 85.5 78 61.5
Atru.chr1.366 Acer truncatum HOM05D000457 ORTHO05D008967 2.7e-15 85.1 75 65.3
Atru.ctg97_1.13 Acer truncatum HOM05D000457 ORTHO05D008967 2.7e-15 85.1 75 65.3
Ca_25424_v3 Cicer arietinum L. HOM05D000457 ORTHO05D008967 2.7e-15 85.1 76 64.5
MSTRG.8715 Avicennia marina HOM05D000457 ORTHO05D008967 4.6e-15 84.3 79 65.8
Nitab4.5_0000572g0080 Nicotiana tabacum HOM05D000457 ORTHO05D008967 7.8e-15 83.6 75 62.7
Phvul.004G109700 Phaseolus vulgaris HOM05D000457 ORTHO05D008967 7.8e-15 83.6 80 60.0
Sc19g0001310 Simmondsia chinensis HOM05D000457 ORTHO05D008967 1.0e-14 83.2 77 64.9
Cpa.g.sc107.101 Carica papaya HOM05D000457 ORTHO05D008967 1.3e-14 82.8 68 66.2
Nitab4.5_0000084g0330 Nicotiana tabacum HOM05D000457 ORTHO05D008967 1.3e-14 82.8 75 62.7
VMungo0464G2072 Vigna mungo HOM05D000457 ORTHO05D008967 1.3e-14 82.8 78 61.5
CsaV3_5G001090 Cucumis sativus L. HOM05D000457 ORTHO05D008967 3.0e-14 81.6 79 60.8
Gohir.D11G011001 Gossypium hirsutum HOM05D000457 ORTHO05D008967 3.0e-14 81.6 76 65.8
Gorai.007G012500 Gossypium raimondii HOM05D000457 ORTHO05D008967 3.0e-14 81.6 76 65.8
Hund04782 Selenicereus undatus HOM05D000457 ORTHO05D008967 3.0e-14 81.6 76 63.2
Medtr0022s0360 Medicago truncatula HOM05D000457 ORTHO05D008967 3.9e-14 81.3 75 57.3
Medtr6g048060 Medicago truncatula HOM05D000457 ORTHO05D008967 3.9e-14 81.3 75 57.3
PGR142G3689 Punica granatum HOM05D000457 ORTHO05D008967 3.9e-14 81.3 78 65.4
Sed0009016 Sechium edule HOM05D000457 ORTHO05D008967 3.9e-14 81.3 79 62.0
Glyma.09G133100 Glycine max HOM05D000457 ORTHO05D008967 5.0e-14 80.9 78 59.0
SalBow2G1735 Salvia bowleyana HOM05D000457 ORTHO05D008967 6.6e-14 80.5 78 61.5
TWI23G0899 Tripterygium wilfordii HOM05D000457 ORTHO05D008967 8.6e-14 80.1 76 59.2
Gohir.A11G011800 Gossypium hirsutum HOM05D000457 ORTHO05D008967 1.1e-13 79.7 76 64.5
SalBow2G2252 Salvia bowleyana HOM05D000457 ORTHO05D008967 1.1e-13 79.7 78 61.5
DCAR_010660 Daucus carota HOM05D000457 ORTHO05D008967 2.5e-13 78.6 81 59.3
EL10Ac3g05431 Beta vulgaris HOM05D000457 ORTHO05D008967 7.3e-13 77.0 79 62.0
PSO782G3743 Papaver somniferum HOM05D000457 ORTHO05D008967 7.3e-13 77.0 86 57.0
FAN06G1897 Fragaria x ananassa HOM05D000457 ORTHO05D008967 3.6e-12 74.7 77 55.8
Migut.F01090 Erythranthe guttata HOM05D000457 ORTHO05D008967 1.1e-11 73.2 79 58.2
SGA_v2.0_scaffold113G31691 Striga asiatica HOM05D002831 ORTHO05D008967 1.1e-11 73.2 78 59.0
Sp6g14750 Schrenkiella parvula HOM05D000457 ORTHO05D008967 1.4e-11 72.8 80 57.5
AL8G27010 Arabidopsis lyrata HOM05D000457 ORTHO05D008967 1.8e-11 72.4 79 59.5
Thhalv10014901m.g Eutrema salsugineum HOM05D000457 ORTHO05D008967 2.3e-11 72.0 81 56.8
PSO478G0375 Papaver somniferum HOM05D000457 ORTHO05D008967 2.3e-11 72.0 83 55.4
AT5G52545 Arabidopsis thaliana HOM05D000457 ORTHO05D008967 3.1e-11 71.6 78 57.7
PSO478G0698 Papaver somniferum HOM05D000457 ORTHO05D008967 4.0e-11 71.2 86 53.5
Aa31LG3G8900 Aethionema arabicum HOM05D000457 ORTHO05D008967 5.2e-11 70.9 83 57.8
BNapus_Darmor_BZH_scaffold_232p00100 Brassica napus HOM05D000457 ORTHO05D008967 6.8e-11 70.5 80 55.0
C02p19570 Brassica napus HOM05D000457 ORTHO05D008967 6.8e-11 70.5 80 55.0
BcaB05g21965 Brassica carinata HOM05D000457 ORTHO05D008967 1.5e-10 69.3 77 54.5
BcaC03g14521 Brassica carinata HOM05D000457 ORTHO05D008967 1.5e-10 69.3 80 55.0
BcaC03g14522 Brassica carinata HOM05D000457 ORTHO05D008967 1.5e-10 69.3 80 55.0
BolC2t08094H Brassica oleracea HOM05D000457 ORTHO05D008967 1.5e-10 69.3 80 55.0
A02p11750 Brassica napus HOM05D000457 ORTHO05D008967 2.6e-10 68.6 80 53.8
BraA02t06240Z Brassica rapa HOM05D000457 ORTHO05D008967 2.6e-10 68.6 80 53.8
Carub.0008s1267 Capsella rubella HOM05D000457 ORTHO05D008967 3.4e-10 68.2 84 54.8
CDE02G2459 Ceratophyllum demersum HOM05D000457 ORTHO05D008967 1.2e-07 59.7 77 54.5
Lsat_1_v5_gn_8_6640 Lactuca sativa HOM05D000457 ORTHO05D008967 1.6e-07 59.3 85 48.2
THA.LOC104811961 Tarenaya hassleriana HOM05D000457 ORTHO05D008967 7.8e-07 57.0 83 48.2
ATR0661G481 Amborella trichopoda HOM05D000457 ORTHO05D008967 6.6e-06 53.9 76 46.1
Zm00001eb021940 Zea mays HOM05D000457 ORTHO05D008967 8.6e-06 53.5 75 42.7


User provided reference genes

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