Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021835 Camellia sinensis var. sinensis HOM05D007616 ORTHO05D008751 3.7e-107 391.7 223 100.0
CSS0006253 Camellia sinensis var. sinensis HOM05D007616 ORTHO05D008751 4.5e-105 384.8 223 98.7
Potri.003G009400 Populus trichocarpa HOM05D007616 ORTHO05D008751 6.8e-45 184.9 230 52.2
CiPaw.05G005800 Carya illinoinensis HOM05D007616 ORTHO05D008751 1.2e-44 184.1 217 55.8
Gohir.D01G173800 Gossypium hirsutum HOM05D007616 ORTHO05D008751 3.8e-43 179.1 226 51.8
Gorai.002G215900 Gossypium raimondii HOM05D007616 ORTHO05D008751 3.8e-43 179.1 226 51.8
Potri.004G222800 Populus trichocarpa HOM05D007616 ORTHO05D008751 6.4e-43 178.3 233 50.6
DCAR_025356 Daucus carota HOM05D007616 ORTHO05D008751 1.1e-42 177.6 243 51.0
Gohir.A01G182700 Gossypium hirsutum HOM05D007616 ORTHO05D008751 1.4e-42 177.2 227 51.5
Actinidia06472 Actinidia chinensis HOM05D007616 ORTHO05D008751 7.1e-42 174.9 201 54.2
COL.COLO4_17740 Corchorus olitorius HOM05D007616 ORTHO05D008751 3.5e-41 172.6 227 49.8
Thecc.02G023400 Theobroma cacao HOM05D007616 ORTHO05D008751 6.0e-41 171.8 229 50.2
Rhsim05G0186200 Rhododendron simsii HOM05D007616 ORTHO05D008751 8.6e-40 167.9 222 53.2
FvH4_6g51930 Fragaria vesca HOM05D007616 ORTHO05D008751 1.9e-39 166.8 241 48.1
FAN14G2995 Fragaria x ananassa HOM05D007616 ORTHO05D008751 1.9e-39 166.8 241 48.1
Oeu000131.1 Olea europaea HOM05D007616 ORTHO05D008751 1.9e-39 166.8 227 51.5
QL02p100178 Quercus lobata HOM05D007616 ORTHO05D008751 4.3e-39 165.6 266 46.2
Duzib132G0975 Durio zibethinus HOM05D007616 ORTHO05D008751 1.2e-38 164.1 230 50.0
Eucgr.I02753 Eucalyptus grandis HOM05D007616 ORTHO05D008751 3.6e-38 162.5 233 49.8
Sopen01g046110 Solanum pennellii HOM05D007616 ORTHO05D008751 8.1e-38 161.4 228 49.1
FAN09G2205 Fragaria x ananassa HOM05D007616 ORTHO05D008751 1.1e-37 161.0 248 46.4
Solyc01g103700.3 Solanum lycopersicum HOM05D007616 ORTHO05D008751 1.8e-37 160.2 234 47.4
Nitab4.5_0002596g0080 Nicotiana tabacum HOM05D007616 ORTHO05D008751 2.4e-37 159.8 256 45.7
Glyma.12G167600 Glycine max HOM05D007616 ORTHO05D008751 4.0e-37 159.1 224 49.1
Prupe.1G577200 Prunus persica HOM05D007616 ORTHO05D008751 1.2e-36 157.5 244 46.7
MSTRG.20315 Avicennia marina HOM05D007616 ORTHO05D008751 2.6e-36 156.4 233 48.1
Manes.07G023000 Manihot esculenta HOM05D007616 ORTHO05D008751 4.4e-36 155.6 232 53.0
Manes.10G119800 Manihot esculenta HOM05D007616 ORTHO05D008751 5.8e-36 155.2 222 50.0
Phvul.006G218400 Phaseolus vulgaris HOM05D007616 ORTHO05D008751 9.9e-36 154.5 213 47.4
VMungo0540G1916 Vigna mungo HOM05D007616 ORTHO05D008751 1.3e-35 154.1 200 51.0
PGSC0003DMG400024897 Solanum tuberosum HOM05D007616 ORTHO05D008751 2.9e-35 152.9 244 46.3
Sed0008181 Sechium edule HOM05D007616 ORTHO05D008751 6.4e-35 151.8 213 49.3
Nitab4.5_0000948g0040 Nicotiana tabacum HOM05D007616 ORTHO05D008751 1.1e-34 151.0 251 45.0
Duzib248G0210 Durio zibethinus HOM05D007616 ORTHO05D008751 1.4e-34 150.6 209 49.3
Sabra03G0004800 Salix brachista HOM05D007616 ORTHO05D008751 2.4e-34 149.8 230 46.5
Atru.chr4.2705 Acer truncatum HOM05D007616 ORTHO05D008751 4.2e-34 149.1 226 53.1
arahy.Tifrunner.gnm1.ann1.D7HVAZ Arachis hypogaea HOM05D007616 ORTHO05D008751 7.1e-34 148.3 230 50.0
Cc02_g23010 Coffea canephora HOM05D007616 ORTHO05D008751 7.1e-34 148.3 239 46.9
CANSAT54G0672 Cannabis sativa HOM05D007616 ORTHO05D008751 9.3e-34 147.9 230 45.2
Peaxi162Scf00011g00934 Petunia axillaris HOM05D007616 ORTHO05D008751 9.3e-34 147.9 259 43.2
ClCG11G013320 Citrullus lanatus HOM05D007616 ORTHO05D008751 1.2e-33 147.5 219 51.1
RcHm_v2.0_Chr2g0173411 Rosa chinensis HOM05D007616 ORTHO05D008751 1.2e-33 147.5 242 42.1
MELO3C011824.2 Cucumis melo HOM05D007616 ORTHO05D008751 1.6e-33 147.1 182 54.9
MD08G1240500 Malus domestica HOM05D007616 ORTHO05D008751 2.1e-33 146.7 246 45.1
CiPaw.06G173100 Carya illinoinensis HOM05D007616 ORTHO05D008751 2.7e-33 146.4 215 50.7
Psat1g223480 Pisum sativum HOM05D007616 ORTHO05D008751 1.3e-32 144.1 258 41.1
arahy.Tifrunner.gnm1.ann1.4HSG2Y Arachis hypogaea HOM05D007616 ORTHO05D008751 1.7e-32 143.7 235 48.9
TPR.G2142 Trifolium pratense HOM05D007616 ORTHO05D008751 1.1e-31 141.0 236 42.8
Lalb_Chr18g0061041 Lupinus albus HOM05D007616 ORTHO05D008751 1.5e-31 140.6 245 44.1
Medtr2g005910 Medicago truncatula HOM05D007616 ORTHO05D008751 3.6e-30 136.0 195 48.2
Nn5g27765 Nelumbo nucifera HOM05D007616 ORTHO05D008751 3.6e-30 136.0 232 44.8
Migut.B00786 Erythranthe guttata HOM05D007616 ORTHO05D008751 3.1e-29 132.9 250 42.4
Lsat_1_v5_gn_9_120740 Lactuca sativa HOM05D007616 ORTHO05D008751 3.1e-29 132.9 218 50.0
Lj6g0028114 Lotus japonicus HOM05D007616 ORTHO05D008751 3.1e-29 132.9 255 41.6
Sabra01G0168700 Salix brachista HOM05D007616 ORTHO05D008751 1.5e-28 130.6 228 44.3
MD15G1433700 Malus domestica HOM05D007616 ORTHO05D008751 2.0e-28 130.2 258 42.6
THA.LOC104816807 Tarenaya hassleriana HOM05D007616 ORTHO05D008751 4.5e-28 129.0 279 38.0
Oeu058636.1 Olea europaea HOM05D007616 ORTHO05D008751 6.4e-27 125.2 217 45.2
SGA_v2.0_scaffold272G46374 Striga asiatica HOM05D007616 ORTHO05D008751 6.4e-27 125.2 219 42.9
HPP92_005665 Vanilla planifolia HOM05D007616 ORTHO05D008751 6.4e-27 125.2 237 41.4
CAN.G798.53 Capsicum annuum HOM05D007616 ORTHO05D008751 2.4e-26 123.2 247 40.1
PSO782G2099 Papaver somniferum HOM05D007616 ORTHO05D008751 2.4e-26 123.2 262 39.3
Aqoxy6G00124 Aquilegia oxysepala HOM05D007616 ORTHO05D008751 3.2e-26 122.9 216 43.1
Ca_00046_v3 Cicer arietinum L. HOM05D001654 ORTHO05D002773 1.2e-25 120.9 142 57.7
PSO170G4229 Papaver somniferum HOM05D007616 ORTHO05D008751 2.1e-25 120.2 256 39.1
ECA236G1993 Erigeron canadensis HOM05D007616 ORTHO05D008751 4.6e-25 119.0 233 44.2
Potri.019G021000 Populus trichocarpa HOM05D007616 ORTHO05D008751 6.7e-24 115.2 227 40.5
CsaV3_5G029830 Cucumis sativus L. HOM05D001654 ORTHO05D002773 8.7e-24 114.8 168 51.2
AL2G17970 Arabidopsis lyrata HOM05D012662 ORTHO05D008751 1.9e-23 113.6 280 36.4
Sc20g0001190 Simmondsia chinensis HOM05D007616 ORTHO05D008751 7.4e-23 111.7 141 53.9
HanXRQChr06g0181301 Helianthus annuus HOM05D007616 ORTHO05D008751 9.0e-21 104.8 231 41.6
TWI14G0953 Tripterygium wilfordii HOM05D007616 ORTHO05D008751 9.0e-21 104.8 233 36.9
AUR62034500 Chenopodium quinoa HOM05D007616 ORTHO05D008751 2.6e-20 103.2 146 51.4
PGR142G0501 Punica granatum HOM05D007616 ORTHO05D008751 5.8e-20 102.1 201 40.3
ATR0090G002 Amborella trichopoda HOM05D007616 ORTHO05D008751 9.9e-20 101.3 241 40.7
BcaC02g10705 Brassica carinata HOM05D007616 ORTHO05D008751 1.7e-19 100.5 214 37.4
AUR62037671 Chenopodium quinoa HOM05D002239 ORTHO05D002408 6.4e-19 98.6 145 49.7
vmacro19869 Vaccinium macrocarpon HOM05D007616 ORTHO05D008751 1.9e-18 97.1 242 38.4
Hma1.2p1_0427F.1_g150730 Hydrangea macrophylla HOM05D007616 ORTHO05D008751 5.5e-18 95.5 140 58.6
GSVIVG01023272001 Vitis vinifera HOM05D007616 ORTHO05D008751 3.0e-16 89.7 226 35.4
Cfa004508 Carpinus fangiana HOM05D007616 ORTHO05D008751 1.9e-15 87.0 207 40.1
Haze_10065 Corylus avellana HOM05D001654 ORTHO05D002773 1.9e-15 87.0 224 38.4
Ah.06g187740 Amaranthus hybridus HOM05D007616 ORTHO05D008751 3.3e-15 86.3 126 50.0
SalBow3G1194 Salvia bowleyana HOM05D007616 ORTHO05D008751 4.3e-15 85.9 216 35.6
Nn1g08457 Nelumbo nucifera HOM05D007616 ORTHO05D008751 2.1e-14 83.6 241 33.6
Hma1.2p1_1108F.1_g257940 Hydrangea macrophylla HOM05D007616 ORTHO05D008751 3.7e-14 82.8 226 37.2
Dinv07475 Davidia involucrata HOM05D001654 ORTHO05D002773 1.4e-13 80.9 183 41.0
Carub.0002s0656 Capsella rubella HOM05D012662 ORTHO05D008751 2.4e-13 80.1 269 33.1
TAR624G1080 Trochodendron aralioides HOM05D007616 ORTHO05D008751 2.4e-13 80.1 118 48.3
C01p35720 Brassica napus HOM05D007616 ORTHO05D008751 2.0e-12 77.0 162 41.4
BolC1t03530H Brassica oleracea HOM05D007616 ORTHO05D008751 2.0e-12 77.0 162 41.4
A09p18580 Brassica napus HOM05D012662 ORTHO05D008751 3.4e-12 76.3 196 36.7
Lsat_1_v5_gn_7_76421 Lactuca sativa HOM05D007616 ORTHO05D008751 5.8e-12 75.5 239 33.5
Rhsim05G0130500 Rhododendron simsii HOM05D007616 ORTHO05D008751 1.7e-11 73.9 108 55.6
ECA240G3878 Erigeron canadensis HOM05D007616 ORTHO05D008751 2.9e-11 73.2 231 34.2
C04p26930 Brassica napus HOM05D007616 ORTHO05D008751 6.5e-11 72.0 128 41.4
BolC4t24105H Brassica oleracea HOM05D007616 ORTHO05D008751 6.5e-11 72.0 128 41.4
Os11g0195800 Oryza sativa ssp. japonica HOM05D007616 ORTHO05D008751 1.4e-10 70.9 279 28.0
unitig_21.g20913 Utricularia gibba HOM05D007616 ORTHO05D008751 5.5e-10 68.9 199 32.7
FAN05G5322 Fragaria x ananassa HOM05D007616 ORTHO05D008751 3.0e-08 63.2 101 42.6
Haze_22627 Corylus avellana HOM05D002661 ORTHO05D002786 5.1e-08 62.4 206 31.1
Gorai.009G270100 Gossypium raimondii HOM05D002661 ORTHO05D002786 1.9e-07 60.5 210 31.4
QL11p039511 Quercus lobata HOM05D007616 ORTHO05D008751 4.3e-07 59.3 45 68.9
Ciclev10002504m.g Citrus clementina HOM05D002661 ORTHO05D002786 5.7e-07 58.9 209 30.6
vmacro04348 Vaccinium macrocarpon HOM05D002661 ORTHO05D002786 5.7e-07 58.9 202 30.2
COL.COLO4_26155 Corchorus olitorius HOM05D002661 ORTHO05D002786 7.4e-07 58.5 207 31.9
Gohir.A05G257100 Gossypium hirsutum HOM05D002661 ORTHO05D002786 9.6e-07 58.2 210 31.9
MBI05_g15357_MAGBIO Magnolia biondii HOM05D002661 ORTHO05D002786 2.1e-06 57.0 218 31.2
QL02p011493 Quercus lobata HOM05D002661 ORTHO05D002786 2.1e-06 57.0 209 29.7
Peaxi162Scf00438g00717 Petunia axillaris HOM05D002661 ORTHO05D002786 2.8e-06 56.6 212 28.3
MELO3C003756.2 Cucumis melo HOM05D002661 ORTHO05D002786 4.8e-06 55.8 102 40.2
Zm00001eb391910 Zea mays HOM05D036147 ORTHO05D008751 4.8e-06 55.8 219 30.6
Gohir.D05G258600 Gossypium hirsutum HOM05D002661 ORTHO05D002786 6.3e-06 55.5 221 29.9
MD08G1013500 Malus domestica HOM05D002661 ORTHO05D002786 6.3e-06 55.5 219 31.1
Nitab4.5_0000337g0140 Nicotiana tabacum HOM05D002661 ORTHO05D002786 6.3e-06 55.5 209 28.2
Sopen03g006340 Solanum pennellii HOM05D002661 ORTHO05D002786 6.3e-06 55.5 210 27.6
PGSC0003DMG400022533 Solanum tuberosum HOM05D002661 ORTHO05D002786 6.3e-06 55.5 210 27.6


User provided reference genes

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