Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021797 Camellia sinensis var. sinensis HOM05D002671 ORTHO05D002985 1.5e-47 192.6 102 100.0
Lj1C1001T3 Lonicera japonica HOM05D002671 ORTHO05D002985 7.0e-29 130.6 83 81.9
Actinidia34131 Actinidia chinensis HOM05D002671 ORTHO05D002985 2.0e-28 129.0 82 84.1
GSVIVG01028910001 Vitis vinifera HOM05D002671 ORTHO05D002985 2.0e-28 129.0 82 82.9
Dinv35225 Davidia involucrata HOM05D002671 ORTHO05D002985 3.5e-28 128.3 80 85.0
vmacro06657 Vaccinium macrocarpon HOM05D002671 ORTHO05D002985 4.5e-28 127.9 81 82.7
Rhsim03G0188000 Rhododendron simsii HOM05D002671 ORTHO05D002985 1.0e-27 126.7 81 81.5
Duzib205G1095 Durio zibethinus HOM05D002671 ORTHO05D002985 6.5e-27 124.0 82 80.5
Actinidia25888 Actinidia chinensis HOM05D002671 ORTHO05D002985 5.5e-26 120.9 84 77.4
TAR629G3527 Trochodendron aralioides HOM05D002671 ORTHO05D002985 1.6e-25 119.4 79 77.2
Gohir.A12G256200 Gossypium hirsutum HOM05D002671 ORTHO05D002985 4.7e-25 117.9 82 74.4
Gohir.D12G257550 Gossypium hirsutum HOM05D002671 ORTHO05D002985 8.0e-25 117.1 82 74.4
Gorai.008G275800 Gossypium raimondii HOM05D002671 ORTHO05D002985 8.0e-25 117.1 82 74.4
Cpa.g.sc107.74 Carica papaya HOM05D002671 ORTHO05D002985 1.0e-24 116.7 81 74.1
Thecc.03G179800 Theobroma cacao HOM05D002671 ORTHO05D002985 1.0e-24 116.7 82 74.4
Prupe.2G297300 Prunus persica HOM05D002671 ORTHO05D002985 1.4e-24 116.3 81 75.3
Sc19g0001400 Simmondsia chinensis HOM05D002671 ORTHO05D002985 1.8e-24 115.9 80 75.0
Haze_00012 Corylus avellana HOM05D002671 ORTHO05D002985 2.3e-24 115.5 76 81.6
CiPaw.05G264200 Carya illinoinensis HOM05D002671 ORTHO05D002985 3.0e-24 115.2 81 74.1
PGR042G0877 Punica granatum HOM05D002671 ORTHO05D002985 3.0e-24 115.2 81 74.1
Atru.chr1.423 Acer truncatum HOM05D002671 ORTHO05D002985 4.0e-24 114.8 81 74.1
Medtr1g100880 Medicago truncatula HOM05D002671 ORTHO05D002985 4.0e-24 114.8 84 70.2
Cfa016260 Carpinus fangiana HOM05D002671 ORTHO05D002985 5.2e-24 114.4 81 75.3
TAR375G0227 Trochodendron aralioides HOM05D002671 ORTHO05D002985 6.8e-24 114.0 75 76.0
Lj5g0013689 Lotus japonicus HOM05D002671 ORTHO05D002985 8.9e-24 113.6 84 70.2
Ciclev10006475m.g Citrus clementina HOM05D002671 ORTHO05D002985 2.6e-23 112.1 81 72.8
Glyma.10G233600 Glycine max HOM05D002671 ORTHO05D002985 2.6e-23 112.1 84 69.0
MD01G1204900 Malus domestica HOM05D002671 ORTHO05D002985 4.4e-23 111.3 81 71.6
RcHm_v2.0_Chr1g0377801 Rosa chinensis HOM05D002671 ORTHO05D002985 4.4e-23 111.3 81 70.4
Manes.06G149700 Manihot esculenta HOM05D002671 ORTHO05D002985 1.3e-22 109.8 82 69.5
MD07G1273400 Malus domestica HOM05D002671 ORTHO05D002985 2.2e-22 109.0 81 71.6
AUR62029421 Chenopodium quinoa HOM05D002671 ORTHO05D002985 3.7e-22 108.2 76 75.0
Ca_10743_v3 Cicer arietinum L. HOM05D002671 ORTHO05D002985 3.7e-22 108.2 84 64.3
FvH4_7g29830 Fragaria vesca HOM05D002671 ORTHO05D002985 3.7e-22 108.2 81 67.9
FAN06G0467 Fragaria x ananassa HOM05D002671 ORTHO05D002985 3.7e-22 108.2 81 67.9
FAN06G4738 Fragaria x ananassa HOM05D002671 ORTHO05D002985 3.7e-22 108.2 81 67.9
Glyma.20G160800 Glycine max HOM05D002671 ORTHO05D002985 3.7e-22 108.2 84 67.9
FAN10G0021 Fragaria x ananassa HOM05D002671 ORTHO05D002985 4.9e-22 107.8 81 67.9
FAN10G2158 Fragaria x ananassa HOM05D002671 ORTHO05D002985 4.9e-22 107.8 81 67.9
FAN01G0120 Fragaria x ananassa HOM05D002671 ORTHO05D002985 6.3e-22 107.5 81 67.9
FAN03G2117 Fragaria x ananassa HOM05D002671 ORTHO05D002985 6.3e-22 107.5 81 67.9
Sabra15G0155400 Salix brachista HOM05D002671 ORTHO05D002985 8.3e-22 107.1 82 68.3
COL.COLO4_04383 Corchorus olitorius HOM05D002671 ORTHO05D002985 4.1e-21 104.8 74 75.7
PSO478G4759 Papaver somniferum HOM05D002671 ORTHO05D002985 4.1e-21 104.8 79 69.6
TWI39G0831 Tripterygium wilfordii HOM05D002671 ORTHO05D002985 4.1e-21 104.8 81 66.7
Nn6g33416 Nelumbo nucifera HOM05D002671 ORTHO05D002985 5.4e-21 104.4 79 68.4
TPR.G26973 Trifolium pratense HOM05D002671 ORTHO05D002985 5.4e-21 104.4 84 64.3
EL10Ac3g05602 Beta vulgaris HOM05D002671 ORTHO05D002985 7.0e-21 104.0 76 71.1
COL.COLO4_14091 Corchorus olitorius HOM05D002671 ORTHO05D002985 7.0e-21 104.0 73 76.7
Potri.015G146100 Populus trichocarpa HOM05D002671 ORTHO05D002985 7.0e-21 104.0 82 65.9
FAN03G3084 Fragaria x ananassa HOM05D002671 ORTHO05D002985 9.2e-21 103.6 81 65.4
Eucgr.A02769 Eucalyptus grandis HOM05D002671 ORTHO05D002985 1.6e-20 102.8 89 65.2
ATR0680G142 Amborella trichopoda HOM05D002671 ORTHO05D002985 2.0e-20 102.4 78 69.2
Hund11735 Selenicereus undatus HOM05D002671 ORTHO05D002985 2.7e-20 102.1 76 69.7
Phvul.007G072200 Phaseolus vulgaris HOM05D002671 ORTHO05D002985 2.9e-19 98.6 71 73.2
CDE06G2833 Ceratophyllum demersum HOM05D002671 ORTHO05D002985 6.6e-19 97.4 79 62.0
Cc02_g02720 Coffea canephora HOM05D002671 ORTHO05D002985 1.9e-18 95.9 81 64.2
PGSC0003DMG400015798 Solanum tuberosum HOM05D002671 ORTHO05D002985 2.5e-18 95.5 97 49.5
CANSAT21G0228 Cannabis sativa HOM05D002671 ORTHO05D002985 1.2e-17 93.2 81 61.7
Peaxi162Scf00444g00423 Petunia axillaris HOM05D002671 ORTHO05D002985 1.6e-17 92.8 81 54.3
THA.LOC104820571 Tarenaya hassleriana HOM05D002671 ORTHO05D002985 1.6e-17 92.8 81 61.7
Nitab4.5_0000084g0090 Nicotiana tabacum HOM05D002671 ORTHO05D002985 1.0e-16 90.1 78 60.3
THA.LOC104798626 Tarenaya hassleriana HOM05D002671 ORTHO05D002985 1.0e-16 90.1 81 60.5
AL5G28570 Arabidopsis lyrata HOM05D002671 ORTHO05D002985 3.0e-16 88.6 76 60.5
Solyc03g025460.3 Solanum lycopersicum HOM05D002671 ORTHO05D002985 4.0e-16 88.2 81 54.3
Sopen03g004300 Solanum pennellii HOM05D002671 ORTHO05D002985 5.2e-16 87.8 81 53.1
arahy.Tifrunner.gnm1.ann1.MUHC0Z Arachis hypogaea HOM05D002671 ORTHO05D010333 2.0e-15 85.9 66 66.7
AT3G49055 Arabidopsis thaliana HOM05D002671 ORTHO05D002985 2.6e-15 85.5 72 59.7
Nn1g01540 Nelumbo nucifera HOM05D002671 ORTHO05D002985 3.4e-15 85.1 79 58.2
CARHR157880 Cardamine hirsuta HOM05D002671 ORTHO05D002985 5.8e-15 84.3 76 57.9
Nitab4.5_0004439g0010 Nicotiana tabacum HOM05D002671 ORTHO05D002985 5.8e-15 84.3 72 56.9
Thhalv10010995m.g Eutrema salsugineum HOM05D002671 ORTHO05D002985 9.8e-15 83.6 73 61.6
Aa31LG4G17530 Aethionema arabicum HOM05D002671 ORTHO05D002985 1.3e-14 83.2 81 55.6
BcaC07g39380 Brassica carinata HOM05D002671 ORTHO05D002985 1.3e-14 83.2 73 60.3
C08p24040 Brassica napus HOM05D000163 ORTHO05D000962 1.3e-14 83.2 73 60.3
BolC8t50026H Brassica oleracea HOM05D000163 ORTHO05D000962 1.3e-14 83.2 73 60.3
SHI10329 Sapria himalayana HOM05D000340 ORTHO05D000821 1.3e-14 83.2 76 59.2
BcaB01g00755 Brassica carinata HOM05D002671 ORTHO05D002985 1.7e-14 82.8 84 56.0
BcaB01g00757 Brassica carinata HOM05D002671 ORTHO05D002985 1.7e-14 82.8 84 56.0
Aqoxy7G00300 Aquilegia oxysepala HOM05D002671 ORTHO05D002985 4.9e-14 81.3 79 54.4
A06p18700 Brassica napus HOM05D002671 ORTHO05D010333 1.1e-13 80.1 73 57.5
MBI17_g24688_MAGBIO Magnolia biondii HOM05D002671 ORTHO05D002985 1.8e-13 79.3 79 58.2
arahy.Tifrunner.gnm1.ann1.EY481C Arachis hypogaea HOM05D002671 ORTHO05D002985 2.4e-13 79.0 62 66.1
BraA06t24952Z Brassica rapa HOM05D002671 ORTHO05D002985 4.1e-13 78.2 73 56.2
Os08g0559800 Oryza sativa ssp. japonica HOM05D002671 ORTHO05D002985 4.1e-13 78.2 75 53.3
PSO782G0118 Papaver somniferum HOM05D002671 ORTHO05D002985 1.2e-12 76.6 53 69.8
Ah.13g068840 Amaranthus hybridus HOM05D002671 ORTHO05D002985 1.9e-10 69.3 65 53.8
SEGI_36472 Sequoiadendron giganteum HOM05D002671 ORTHO05D002985 2.5e-10 68.9 76 46.1
Thhalv10010940m.g Eutrema salsugineum HOM05D002671 ORTHO05D002985 7.3e-10 67.4 85 49.4
COL.COLO4_28047 Corchorus olitorius HOM05D002671 ORTHO05D002985 6.2e-09 64.3 41 78.0
SEGI_37581 Sequoiadendron giganteum HOM05D002671 ORTHO05D002985 4.0e-08 61.6 71 46.5
AUR62003420 Chenopodium quinoa HOM05D002671 ORTHO05D002985 1.3e-06 56.6 40 67.5
PSO063G0918 Papaver somniferum HOM05D002671 ORTHO05D002985 1.7e-06 56.2 85 37.6
PSO754G0096 Papaver somniferum HOM05D002671 ORTHO05D002985 2.2e-06 55.8 70 38.6
ATR0199G036 Amborella trichopoda HOM05D002671 ORTHO05D002985 6.4e-06 54.3 71 42.3
CANSAT01G2908 Cannabis sativa HOM05D002671 ORTHO05D002985 8.3e-06 53.9 76 38.2


User provided reference genes

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