Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021742 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 1.2e-39 166.0 81 100.0
CSS0028514 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 2.1e-28 128.6 81 82.7
CSS0044918 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 2.1e-28 128.6 81 82.7
CSS0047183 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 2.1e-28 128.6 81 82.7
CSS0008863 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 2.8e-28 128.3 81 81.5
CSS0044079 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 2.8e-28 128.3 81 81.5
CSS0047605 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 1.8e-27 125.6 81 80.2
CSS0025187 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 1.5e-26 122.5 81 79.0
CSS0014503 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 7.8e-15 83.6 48 85.4
CSS0021979 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 7.8e-15 83.6 48 85.4
Duzib128G0483 Durio zibethinus HOM05D007316 ORTHO05D009393 1.9e-13 79.0 48 77.1
Gohir.D13G105800 Gossypium hirsutum HOM05D007316 ORTHO05D009393 3.3e-13 78.2 54 70.4
CSS0015421 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 4.3e-13 77.8 48 77.1
Duzib106G1284 Durio zibethinus HOM05D007316 ORTHO05D009393 5.6e-13 77.4 48 72.9
Glyma.03G226500 Glycine max HOM05D007316 ORTHO05D009393 9.5e-13 76.6 52 69.2
Potri.004G058400 Populus trichocarpa HOM05D007316 ORTHO05D009393 1.2e-12 76.3 48 72.9
Glyma.19G223500 Glycine max HOM05D007316 ORTHO05D009393 1.6e-12 75.9 52 67.3
Potri.011G067800 Populus trichocarpa HOM05D007316 ORTHO05D009393 1.6e-12 75.9 48 72.9
vmacro19806 Vaccinium macrocarpon HOM05D007316 ORTHO05D009393 1.6e-12 75.9 45 77.8
Phvul.001G220400 Phaseolus vulgaris HOM05D007316 ORTHO05D009393 2.1e-12 75.5 51 68.6
CSS0022236 Camellia sinensis var. sinensis HOM05D007316 ORTHO05D009393 2.8e-12 75.1 48 75.0
TAR362G0014 Trochodendron aralioides HOM05D007316 ORTHO05D009393 3.6e-12 74.7 43 76.7
AL2G32940 Arabidopsis lyrata HOM05D007316 ORTHO05D009393 4.7e-12 74.3 48 70.8
Manes.17G057300 Manihot esculenta HOM05D007316 ORTHO05D009393 4.7e-12 74.3 51 68.6
Thecc.05G261200 Theobroma cacao HOM05D007316 ORTHO05D009393 4.7e-12 74.3 48 72.9
Cfa016046 Carpinus fangiana HOM05D007316 ORTHO05D009393 8.1e-12 73.6 48 70.8
Nn7g37509 Nelumbo nucifera HOM05D007316 ORTHO05D009393 8.1e-12 73.6 42 78.6
Hma1.2p1_0157F.1_g069460 Hydrangea macrophylla HOM05D007316 ORTHO05D009393 1.1e-11 73.2 43 76.7
Psat3g015560 Pisum sativum HOM05D007316 ORTHO05D009393 1.1e-11 73.2 51 66.7
BcaC08g45665 Brassica carinata HOM05D007316 ORTHO05D009393 1.4e-11 72.8 45 75.6
Migut.B00683 Erythranthe guttata HOM05D007316 ORTHO05D009393 1.4e-11 72.8 43 76.7
Migut.B00911 Erythranthe guttata HOM05D007316 ORTHO05D009393 1.4e-11 72.8 43 76.7
TWI23G0494 Tripterygium wilfordii HOM05D007316 ORTHO05D009393 1.4e-11 72.8 51 68.6
GSVIVG01029768001 Vitis vinifera HOM05D007316 ORTHO05D009393 1.4e-11 72.8 48 70.8
Ciclev10023234m.g Citrus clementina HOM05D007316 ORTHO05D009393 1.8e-11 72.4 51 66.7
FvH4_4g00490 Fragaria vesca HOM05D007316 ORTHO05D009393 1.8e-11 72.4 43 72.1
FAN12G3999 Fragaria x ananassa HOM05D007316 ORTHO05D009393 1.8e-11 72.4 43 72.1
FAN17G1024 Fragaria x ananassa HOM05D007316 ORTHO05D009393 1.8e-11 72.4 43 72.1
FAN22G1131 Fragaria x ananassa HOM05D007316 ORTHO05D009393 1.8e-11 72.4 43 72.1
Lj1g0006735 Lotus japonicus HOM05D007316 ORTHO05D009393 1.8e-11 72.4 51 62.7
RcHm_v2.0_Chr4g0385941 Rosa chinensis HOM05D007316 ORTHO05D009393 1.8e-11 72.4 43 72.1
RcHm_v2.0_Chr4g0387841 Rosa chinensis HOM05D007316 ORTHO05D009393 1.8e-11 72.4 43 72.1
RcHm_v2.0_Chr4g0387941 Rosa chinensis HOM05D007316 ORTHO05D009393 1.8e-11 72.4 43 72.1
ClCG09G016900 Citrullus lanatus HOM05D007316 ORTHO05D009393 2.3e-11 72.0 48 70.8
Medtr7g111090 Medicago truncatula HOM05D007316 ORTHO05D009393 2.3e-11 72.0 51 64.7
Sed0015703 Sechium edule HOM05D007316 ORTHO05D009393 2.3e-11 72.0 48 70.8
A07p29930 Brassica napus HOM05D007316 ORTHO05D009393 3.1e-11 71.6 48 70.8
C06p34200 Brassica napus HOM05D007316 ORTHO05D009393 3.1e-11 71.6 48 70.8
BolC6t38541H Brassica oleracea HOM05D007316 ORTHO05D009393 3.1e-11 71.6 48 70.8
BraA07t30632Z Brassica rapa HOM05D007316 ORTHO05D009393 3.1e-11 71.6 48 70.8
CANSAT56G2903 Cannabis sativa HOM05D007316 ORTHO05D009393 3.1e-11 71.6 43 76.7
Thhalv10019421m.g Eutrema salsugineum HOM05D007316 ORTHO05D009393 3.1e-11 71.6 43 76.7
THA.LOC104813939 Tarenaya hassleriana HOM05D007316 ORTHO05D009393 3.1e-11 71.6 48 70.8
Aa31LG4G3460 Aethionema arabicum HOM05D007316 ORTHO05D009393 4.0e-11 71.2 42 78.6
Ca_09261_v3 Cicer arietinum L. HOM05D007316 ORTHO05D009393 4.0e-11 71.2 52 61.5
SalBow3G1440 Salvia bowleyana HOM05D007316 ORTHO05D009393 4.0e-11 71.2 48 68.8
AT1G73177 Arabidopsis thaliana HOM05D007316 ORTHO05D009393 6.8e-11 70.5 48 68.8
Carub.0002s1996 Capsella rubella HOM05D007316 ORTHO05D009393 6.8e-11 70.5 48 68.8
MELO3C021892.2 Cucumis melo HOM05D007316 ORTHO05D009393 6.8e-11 70.5 48 68.8
QL02p030600 Quercus lobata HOM05D007316 ORTHO05D009393 6.8e-11 70.5 48 66.7
QL09p015786 Quercus lobata HOM05D007316 ORTHO05D009393 6.8e-11 70.5 48 66.7
QL09p023249 Quercus lobata HOM05D007316 ORTHO05D009393 6.8e-11 70.5 48 66.7
CsaV3_2G036390 Cucumis sativus L. HOM05D007316 ORTHO05D009393 8.9e-11 70.1 48 68.8
Oeu034759.1 Olea europaea HOM05D007316 ORTHO05D009393 8.9e-11 70.1 45 68.9
Sp5g28140 Schrenkiella parvula HOM05D007316 ORTHO05D009393 8.9e-11 70.1 48 68.8
Cc02_g36870 Coffea canephora HOM05D007316 ORTHO05D009393 1.2e-10 69.7 44 75.0
arahy.Tifrunner.gnm1.ann1.AE1MMP Arachis hypogaea HOM05D007316 ORTHO05D009393 2.6e-10 68.6 51 62.7
arahy.Tifrunner.gnm1.ann1.CUXT1U Arachis hypogaea HOM05D007316 ORTHO05D009393 2.6e-10 68.6 51 62.7
Cpa.g.sc233.10 Carica papaya HOM05D007316 ORTHO05D009393 2.6e-10 68.6 50 68.0
CARHR066170 Cardamine hirsuta HOM05D007316 ORTHO05D009393 3.4e-10 68.2 48 66.7
CiPaw.05G216300 Carya illinoinensis HOM05D007316 ORTHO05D009393 3.4e-10 68.2 43 76.7
Atru.chr12.1494 Acer truncatum HOM05D007316 ORTHO05D009393 4.4e-10 67.8 51 62.7
Lalb_Chr04g0260251 Lupinus albus HOM05D007316 ORTHO05D009393 4.4e-10 67.8 50 60.0
PGR119G2118 Punica granatum HOM05D007316 ORTHO05D009393 4.4e-10 67.8 48 64.6
Aqoxy7G02856 Aquilegia oxysepala HOM05D007316 ORTHO05D009393 5.8e-10 67.4 49 63.3
Prupe.3G122600 Prunus persica HOM05D007316 ORTHO05D009393 5.8e-10 67.4 48 64.6
GSVIVG01026029001 Vitis vinifera HOM05D007316 ORTHO05D009393 7.5e-10 67.0 45 64.4
Eucgr.H00565 Eucalyptus grandis HOM05D007316 ORTHO05D009393 9.9e-10 66.6 48 62.5
HanXRQChr07g0193721 Helianthus annuus HOM05D007316 ORTHO05D009393 1.7e-09 65.9 41 68.3
Lsat_1_v5_gn_9_84180 Lactuca sativa HOM05D007316 ORTHO05D009393 2.9e-09 65.1 41 65.9
Sopen08g002530 Solanum pennellii HOM05D007316 ORTHO05D009393 6.4e-09 63.9 45 68.9
Actinidia11709 Actinidia chinensis HOM05D007316 ORTHO05D009393 8.3e-09 63.5 35 80.0
COL.COLO4_20544 Corchorus olitorius HOM05D007316 ORTHO05D009393 8.3e-09 63.5 49 63.3
Peaxi162Scf00071g00128 Petunia axillaris HOM05D007316 ORTHO05D009393 1.1e-08 63.2 45 64.4
MBI18_g28941_MAGBIO Magnolia biondii HOM05D000032 ORTHO05D004701 1.4e-08 62.8 47 59.6
Ah.09g230190 Amaranthus hybridus HOM05D007316 ORTHO05D009393 1.9e-08 62.4 47 59.6
MD09G1239400 Malus domestica HOM05D007316 ORTHO05D009393 1.9e-08 62.4 48 58.3
PGSC0003DMG400026307 Solanum tuberosum HOM05D007316 ORTHO05D009393 4.1e-08 61.2 45 64.4
AUR62021328 Chenopodium quinoa HOM05D007316 ORTHO05D009393 1.2e-07 59.7 68 48.5
Rhsim05G0117300 Rhododendron simsii HOM05D007316 ORTHO05D009393 1.2e-07 59.7 65 50.8
RhsimUnG0015700 Rhododendron simsii HOM05D007316 ORTHO05D009393 1.2e-07 59.7 65 50.8
EL10Ac8g18312 Beta vulgaris HOM05D007316 ORTHO05D009393 4.6e-07 57.8 47 53.2
Os07g0633800 Oryza sativa ssp. japonica HOM05D007316 ORTHO05D009393 8.6e-06 53.5 39 59.0


User provided reference genes

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