Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021721 Camellia sinensis var. sinensis HOM05D002612 ORTHO05D002859 4.2e-104 381.3 189 100.0
vmacro18657 Vaccinium macrocarpon HOM05D002612 ORTHO05D002859 2.7e-58 229.2 270 50.4
Dinv15109 Davidia involucrata HOM05D002612 ORTHO05D002859 3.1e-54 215.7 192 60.4
Rhsim08G0003500 Rhododendron simsii HOM05D002612 ORTHO05D008618 1.3e-52 210.3 222 55.4
TAR381G1391 Trochodendron aralioides HOM05D002612 ORTHO05D002859 6.0e-50 201.4 186 59.7
PGR119G2242 Punica granatum HOM05D002612 ORTHO05D002859 5.6e-48 194.9 185 55.7
CiPaw.04G083700 Carya illinoinensis HOM05D002612 ORTHO05D002859 9.9e-45 184.1 185 51.4
Eucgr.I00248 Eucalyptus grandis HOM05D002612 ORTHO05D002859 9.9e-45 184.1 184 53.8
Lalb_Chr23g0272501 Lupinus albus HOM05D002612 ORTHO05D002859 2.4e-43 179.5 185 51.9
Nn1g06087 Nelumbo nucifera HOM05D002612 ORTHO05D002859 2.1e-42 176.4 191 53.4
RcHm_v2.0_Chr2g0119201 Rosa chinensis HOM05D002612 ORTHO05D002859 3.0e-41 172.6 186 54.3
Gohir.A11G228400 Gossypium hirsutum HOM05D002612 ORTHO05D002859 1.5e-40 170.2 195 49.7
Gorai.002G151000 Gossypium raimondii HOM05D002612 ORTHO05D002859 1.5e-40 170.2 195 50.3
Gohir.D11G233100 Gossypium hirsutum HOM05D002612 ORTHO05D002859 1.9e-40 169.9 195 50.3
Manes.12G148500 Manihot esculenta HOM05D002612 ORTHO05D002859 3.3e-40 169.1 188 54.8
Prupe.6G162400 Prunus persica HOM05D002612 ORTHO05D002859 3.3e-40 169.1 181 52.5
Ciclev10026217m.g Citrus clementina HOM05D002612 ORTHO05D002859 4.3e-40 168.7 197 51.3
FAN19G0842 Fragaria x ananassa HOM05D002612 ORTHO05D002859 1.6e-39 166.8 186 53.2
FvH4_1g23620 Fragaria vesca HOM05D002612 ORTHO05D002859 3.6e-39 165.6 186 53.2
MD01G1016700 Malus domestica HOM05D002612 ORTHO05D002859 3.6e-39 165.6 185 50.8
TWI79G0923 Tripterygium wilfordii HOM05D002612 ORTHO05D002859 3.6e-39 165.6 193 51.3
Duzib187G0226 Durio zibethinus HOM05D002612 ORTHO05D002859 8.1e-39 164.5 200 49.5
FAN28G2197 Fragaria x ananassa HOM05D002612 ORTHO05D002859 1.5e-37 160.2 186 53.2
FAN26G0434 Fragaria x ananassa HOM05D002612 ORTHO05D002859 2.6e-37 159.5 185 53.0
Glyma.04G216300 Glycine max HOM05D002612 ORTHO05D002859 2.6e-37 159.5 179 47.5
Ca_16913_v3 Cicer arietinum L. HOM05D002612 ORTHO05D002859 4.2e-35 152.1 181 49.7
ClCG02G000710 Citrullus lanatus HOM05D002612 ORTHO05D002859 1.2e-34 150.6 187 50.8
Glyma.09G116600 Glycine max HOM05D002612 ORTHO05D002859 2.7e-34 149.4 185 45.4
GSVIVG01026590001 Vitis vinifera HOM05D002612 ORTHO05D002859 3.5e-34 149.1 194 48.5
Oeu028500.1 Olea europaea HOM05D002612 ORTHO05D002859 6.0e-34 148.3 194 45.9
Migut.H01111 Erythranthe guttata HOM05D002612 ORTHO05D002859 1.0e-33 147.5 187 46.0
Phvul.009G147300 Phaseolus vulgaris HOM05D002612 ORTHO05D002859 1.7e-33 146.7 179 45.8
Prupe.6G131200 Prunus persica HOM05D002612 ORTHO05D002859 6.6e-33 144.8 184 48.9
CsaV3_2G018060 Cucumis sativus L. HOM05D002612 ORTHO05D002859 1.1e-32 144.1 190 45.3
Nitab4.5_0011433g0030 Nicotiana tabacum HOM05D002612 ORTHO05D002859 7.3e-32 141.4 182 46.7
Nitab4.5_0001582g0020 Nicotiana tabacum HOM05D002612 ORTHO05D002859 9.6e-32 141.0 182 47.3
Sopen11g001410 Solanum pennellii HOM05D002612 ORTHO05D002859 1.6e-31 140.2 182 45.6
Sc07g0001640 Simmondsia chinensis HOM05D002612 ORTHO05D002859 2.1e-31 139.8 177 46.9
Cfa002873 Carpinus fangiana HOM05D002612 ORTHO05D002859 2.8e-31 139.4 129 53.5
Solyc11g005400.2 Solanum lycopersicum HOM05D002612 ORTHO05D002859 6.2e-31 138.3 182 45.1
Medtr3g095470 Medicago truncatula HOM05D002612 ORTHO05D002859 8.1e-31 137.9 182 48.9
Psat5g063880 Pisum sativum HOM05D002612 ORTHO05D002859 8.1e-31 137.9 183 45.9
CANSAT01G0950 Cannabis sativa HOM05D002612 ORTHO05D002859 1.1e-30 137.5 187 48.1
Gorai.008G099800 Gossypium raimondii HOM05D002612 ORTHO05D002859 1.1e-30 137.5 193 45.6
TPR.G18733 Trifolium pratense HOM05D002612 ORTHO05D002859 1.1e-30 137.5 184 46.2
FAN23G2963 Fragaria x ananassa HOM05D002612 ORTHO05D002859 1.4e-30 137.1 188 48.4
Hund19610 Selenicereus undatus HOM05D002612 ORTHO05D002859 2.4e-30 136.3 213 40.4
MBI08_g14971_MAGBIO Magnolia biondii HOM05D002612 ORTHO05D002859 3.1e-30 136.0 139 54.7
PGSC0003DMG400003989 Solanum tuberosum HOM05D002612 ORTHO05D002859 3.1e-30 136.0 182 44.5
Gorai.002G150500 Gossypium raimondii HOM05D002612 ORTHO05D002859 6.9e-30 134.8 193 44.0
Gohir.A11G221275 Gossypium hirsutum HOM05D002612 ORTHO05D002859 5.8e-29 131.7 193 43.0
Cc07_g17320 Coffea canephora HOM05D002612 ORTHO05D002859 9.9e-29 131.0 195 40.5
MSTRG.23420 Avicennia marina HOM05D002612 ORTHO05D002859 2.9e-28 129.4 192 42.7
CAN.G249.15 Capsicum annuum HOM05D002612 ORTHO05D002859 3.8e-28 129.0 182 45.6
Potri.019G010000 Populus trichocarpa HOM05D002612 ORTHO05D002859 8.4e-28 127.9 191 46.1
QL06p051793 Quercus lobata HOM05D002612 ORTHO05D002859 1.9e-27 126.7 134 52.2
Lj1g0016833 Lotus japonicus HOM05D002612 ORTHO05D002859 9.3e-27 124.4 182 42.3
Potri.001G308900 Populus trichocarpa HOM05D002612 ORTHO05D002859 2.1e-26 123.2 190 44.7
EL10Ac6g15249 Beta vulgaris HOM05D002612 ORTHO05D002859 3.5e-26 122.5 182 45.6
Dinv09945 Davidia involucrata HOM05D002612 ORTHO05D002859 6.0e-26 121.7 87 70.1
Sed0024742 Sechium edule HOM05D002612 ORTHO05D002859 1.3e-25 120.6 200 42.5
Thecc.01G120500 Theobroma cacao HOM05D002612 ORTHO05D002859 1.3e-25 120.6 146 49.3
COL.COLO4_22413 Corchorus olitorius HOM05D002612 ORTHO05D002859 8.7e-25 117.9 157 48.4
Actinidia12238 Actinidia chinensis HOM05D002612 ORTHO05D002859 1.5e-24 117.1 148 49.3
MELO3C023267.2 Cucumis melo HOM05D002612 ORTHO05D002859 2.5e-24 116.3 195 41.0
CDE06G1146 Ceratophyllum demersum HOM05D002612 ORTHO05D002859 4.3e-24 115.5 204 41.2
DCAR_014350 Daucus carota HOM05D002612 ORTHO05D002859 1.8e-22 110.2 130 46.2
Atru.chr4.545 Acer truncatum HOM05D002612 ORTHO05D002859 6.9e-22 108.2 143 46.9
Migut.H01125 Erythranthe guttata HOM05D002612 ORTHO05D002859 9.0e-22 107.8 185 39.5
Gohir.D12G092200 Gossypium hirsutum HOM05D002612 ORTHO05D002859 2.6e-21 106.3 195 41.0
Sabra19G0018900 Salix brachista HOM05D002612 ORTHO05D002859 1.9e-19 100.1 235 37.4
Sabra19G0023200 Salix brachista HOM05D002612 ORTHO05D002859 1.9e-19 100.1 235 37.4
PSO541G4834 Papaver somniferum HOM05D002612 ORTHO05D002859 3.2e-19 99.4 193 39.9
Aqoxy5G02093 Aquilegia oxysepala HOM05D002612 ORTHO05D002859 1.0e-17 94.4 192 37.0
HanXRQChr09g0259761 Helianthus annuus HOM05D002612 ORTHO05D002859 3.9e-17 92.4 216 36.6
Aqoxy5G02092 Aquilegia oxysepala HOM05D002612 ORTHO05D002859 5.1e-17 92.0 195 36.4
Hma1.2p1_0070F.1_g037530 Hydrangea macrophylla HOM05D002612 ORTHO05D002859 4.3e-16 89.0 53 73.6
Peaxi162Scf00025g02430 Petunia axillaris HOM05D002612 ORTHO05D002859 7.4e-16 88.2 182 36.3
SalBow8G3976 Salvia bowleyana HOM05D002612 ORTHO05D002859 9.6e-16 87.8 195 35.9
AUR62003628 Chenopodium quinoa HOM05D002612 ORTHO05D002859 6.2e-15 85.1 130 40.0
VMungo1309G0994 Vigna mungo HOM05D002612 ORTHO05D002859 6.2e-15 85.1 84 51.2
AUR62017938 Chenopodium quinoa HOM05D002612 ORTHO05D002859 1.1e-14 84.3 130 40.0
Os04g0687300 Oryza sativa ssp. japonica HOM05D002612 ORTHO05D002859 1.1e-14 84.3 191 36.1
Sabra16G0194700 Salix brachista HOM05D002612 ORTHO05D002859 2.4e-14 83.2 147 40.8
PSO675G0676 Papaver somniferum HOM05D002612 ORTHO05D002859 4.9e-12 75.5 137 40.1
Sed0025054 Sechium edule HOM05D002612 ORTHO05D002859 6.5e-12 75.1 124 42.7
Dinv09944 Davidia involucrata HOM05D002612 ORTHO05D002859 1.9e-11 73.6 90 44.4
Glyma.09G116800 Glycine max HOM05D002612 ORTHO05D002859 1.9e-11 73.6 50 64.0
THA.LOC104807838 Tarenaya hassleriana HOM05D002612 ORTHO05D002859 3.2e-11 72.8 137 37.2
Zm00001eb076140 Zea mays HOM05D002612 ORTHO05D002859 3.2e-11 72.8 170 34.7
Ah.03g146550 Amaranthus hybridus HOM05D002612 ORTHO05D002859 5.5e-11 72.0 170 34.7
Sabra19G0022700 Salix brachista HOM05D002612 ORTHO05D002859 2.1e-10 70.1 218 34.9
VMungo1309G1282 Vigna mungo HOM05D002612 ORTHO05D002859 4.6e-10 68.9 50 58.0
Gohir.D11G226380 Gossypium hirsutum HOM05D002612 ORTHO05D002859 1.3e-09 67.4 75 50.7
HPP92_009299 Vanilla planifolia HOM05D001656 ORTHO05D003489 1.3e-09 67.4 207 31.9
Cpa.g.sc152.23 Carica papaya HOM05D002612 ORTHO05D002859 3.0e-09 66.2 87 48.3
Sabra19G0019400 Salix brachista HOM05D002612 ORTHO05D002859 1.5e-08 63.9 160 35.6
Gohir.A12G079900 Gossypium hirsutum HOM05D002612 ORTHO05D002859 2.2e-07 60.1 113 37.2


User provided reference genes

Program Settings