Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021707 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 4.7e-37 157.5 90 100.0
CSS0031911 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 7.3e-30 133.7 90 81.1
CSS0026516 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 5.4e-25 117.5 94 73.4
CSS0036107 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 3.5e-24 114.8 90 74.4
Rhsim06G0064100 Rhododendron simsii HOM05D001756 ORTHO05D001581 4.2e-09 64.7 96 45.8
Actinidia19298 Actinidia chinensis HOM05D001756 ORTHO05D001581 9.3e-09 63.5 82 50.0
CSS0014839 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 9.3e-09 63.5 87 52.9
CSS0047712 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 9.3e-09 63.5 87 52.9
Dinv44936 Davidia involucrata HOM05D001756 ORTHO05D001581 1.3e-07 59.7 84 48.8
MD10G1110000 Malus domestica HOM05D001756 ORTHO05D001581 3.0e-07 58.5 81 42.0
Atru.chr13.861 Acer truncatum HOM05D001756 ORTHO05D001581 3.9e-07 58.2 89 44.9
vmacro21422 Vaccinium macrocarpon HOM05D001756 ORTHO05D001581 3.9e-07 58.2 89 43.8
RcHm_v2.0_Chr6g0248481 Rosa chinensis HOM05D001756 ORTHO05D001581 5.1e-07 57.8 82 41.5
C08p24800 Brassica napus HOM05D001756 ORTHO05D001581 6.6e-07 57.4 80 48.8
FvH4_2g03340 Fragaria vesca HOM05D001756 ORTHO05D001581 8.7e-07 57.0 82 40.2
FAN20G1648 Fragaria x ananassa HOM05D001756 ORTHO05D001581 1.1e-06 56.6 84 41.7
FAN27G0458 Fragaria x ananassa HOM05D001756 ORTHO05D001581 1.1e-06 56.6 82 39.0
QL11p029356 Quercus lobata HOM05D001756 ORTHO05D001581 1.1e-06 56.6 87 41.4
A09p42920 Brassica napus HOM05D001756 ORTHO05D001581 1.5e-06 56.2 80 48.8
BraA09t39759Z Brassica rapa HOM05D001756 ORTHO05D001581 1.5e-06 56.2 80 48.8
BolC8t50097H Brassica oleracea HOM05D001756 ORTHO05D001581 1.9e-06 55.8 80 47.5
CiPaw.06G164100 Carya illinoinensis HOM05D001756 ORTHO05D001581 1.9e-06 55.8 85 43.5
Thhalv10010875m.g Eutrema salsugineum HOM05D001756 ORTHO05D001581 1.9e-06 55.8 80 46.2
Carub.0005s1613 Capsella rubella HOM05D001756 ORTHO05D001581 2.5e-06 55.5 80 50.0
FvH4_2g32750 Fragaria vesca HOM05D001756 ORTHO05D001581 3.3e-06 55.1 81 39.5
FAN24G1728 Fragaria x ananassa HOM05D001756 ORTHO05D001581 3.3e-06 55.1 81 39.5
Lj7A111T6 Lonicera japonica HOM05D001756 ORTHO05D001581 3.3e-06 55.1 85 47.1
C01p30590 Brassica napus HOM05D001756 ORTHO05D001581 5.6e-06 54.3 80 47.5
BolC1t02995H Brassica oleracea HOM05D001756 ORTHO05D001581 5.6e-06 54.3 80 47.5
CARHR158860 Cardamine hirsuta HOM05D001756 ORTHO05D001581 7.3e-06 53.9 81 44.4
Rhsim06G0064200 Rhododendron simsii HOM05D001756 ORTHO05D001581 7.3e-06 53.9 81 44.4
Actinidia16413 Actinidia chinensis HOM05D001756 ORTHO05D001581 9.6e-06 53.5 84 45.2
CSS0039448 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 9.6e-06 53.5 92 40.2
CSS0048145 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 9.6e-06 53.5 84 45.2
Cfa004702 Carpinus fangiana HOM05D001756 ORTHO05D001581 9.6e-06 53.5 84 41.7
HanXRQChr03g0072941 Helianthus annuus HOM05D001756 ORTHO05D001581 9.6e-06 53.5 82 45.1


User provided reference genes

Program Settings