Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021689 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 7.8e-152 540.4 272 100.0
CSS0049472 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 5.0e-90 335.1 304 63.8
CSS0038469 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 1.6e-88 330.1 263 70.3
CSS0010964 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 4.2e-81 305.4 264 64.8
CSS0033678 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 4.6e-27 125.9 133 55.6
CSS0040185 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 1.3e-26 124.4 154 51.9
CSS0045228 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 1.8e-23 114.0 143 51.0
RcHm_v2.0_Chr6g0269851 Rosa chinensis HOM05D008321 ORTHO05D003768 2.4e-20 103.6 292 30.1
RcHm_v2.0_Chr2g0134701 Rosa chinensis HOM05D009091 ORTHO05D003768 3.3e-17 93.2 190 33.2
FvH4_5g37213 Fragaria vesca HOM05D008321 ORTHO05D010380 9.6e-17 91.7 203 31.0
FvH4_1g29233 Fragaria vesca HOM05D008321 ORTHO05D003768 1.6e-16 90.9 282 28.4
RcHm_v2.0_Chr4g0433611 Rosa chinensis HOM05D009091 ORTHO05D003768 4.0e-15 86.3 221 31.2
FAN08G3223 Fragaria x ananassa HOM05D009091 ORTHO05D003768 2.6e-14 83.6 189 31.2
FvH4_3g32731 Fragaria vesca HOM05D008321 ORTHO05D003768 1.9e-12 77.4 211 28.4
FvH4_5g18423 Fragaria vesca HOM05D009091 ORTHO05D000062 4.2e-12 76.3 194 29.4
FAN19G2766 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.2e-11 74.7 212 29.7
FvH4_4g10363 Fragaria vesca HOM05D008321 ORTHO05D003768 1.6e-11 74.3 213 28.6
RcHm_v2.0_Chr1g0315701 Rosa chinensis HOM05D009091 ORTHO05D003768 1.6e-11 74.3 114 38.6
Oeu029662.1 Olea europaea HOM05D009091 ORTHO05D003768 2.7e-11 73.6 148 35.8
FvH4_4g15323 Fragaria vesca HOM05D008321 ORTHO05D010380 3.5e-11 73.2 197 27.4
CSS0011924 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006706 7.9e-11 72.0 43 81.4
FAN01G0361 Fragaria x ananassa HOM05D009091 ORTHO05D004377 7.9e-11 72.0 154 33.8
RcHm_v2.0_Chr4g0420561 Rosa chinensis HOM05D009091 ORTHO05D003768 1.3e-10 71.2 202 31.2
Sed0001060 Sechium edule HOM05D007314 ORTHO05D003768 2.3e-10 70.5 194 32.5
CSS0045721 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 3.0e-10 70.1 43 79.1
FvH4_4g16173 Fragaria vesca HOM05D008321 ORTHO05D003768 3.0e-10 70.1 213 28.6
FvH4_6g35541 Fragaria vesca HOM05D009091 ORTHO05D003768 3.9e-10 69.7 145 33.8
CsaV3_3G006830 Cucumis sativus L. HOM05D007314 ORTHO05D003768 5.1e-10 69.3 301 25.2
FAN22G1616 Fragaria x ananassa HOM05D009091 ORTHO05D003768 3.3e-09 66.6 119 37.0
RcHm_v2.0_Chr3g0458231 Rosa chinensis HOM05D007314 ORTHO05D003768 1.6e-08 64.3 185 32.4
RcHm_v2.0_Chr3g0496631 Rosa chinensis HOM05D009091 ORTHO05D003768 2.8e-08 63.5 129 33.3
Atru.chr7.467 Acer truncatum HOM05D000107 ORTHO05D000062 4.8e-08 62.8 201 28.9
FvH4_6g20173 Fragaria vesca HOM05D008321 ORTHO05D010380 4.8e-08 62.8 149 30.9
RcHm_v2.0_Chr1g0357501 Rosa chinensis HOM05D009091 ORTHO05D003768 4.8e-08 62.8 90 40.0
Oeu048290.1 Olea europaea HOM05D009091 ORTHO05D003768 1.1e-07 61.6 109 37.6
FvH4_2g07142 Fragaria vesca HOM05D008321 ORTHO05D003768 3.1e-07 60.1 239 24.7
FvH4_6g17382 Fragaria vesca HOM05D008321 ORTHO05D003768 3.1e-07 60.1 183 29.5
Oeu050751.1 Olea europaea HOM05D009091 ORTHO05D003768 3.1e-07 60.1 205 28.8
FAN03G1875 Fragaria x ananassa HOM05D008321 ORTHO05D003768 5.3e-07 59.3 199 25.6
FAN16G3103 Fragaria x ananassa HOM05D008321 ORTHO05D003768 5.3e-07 59.3 206 26.2
Oeu016711.1 Olea europaea HOM05D023826 ORTHO05D003768 6.9e-07 58.9 159 32.7
Oeu040990.1 Olea europaea HOM05D000700 ORTHO05D000397 6.9e-07 58.9 115 33.0
FAN18G1459 Fragaria x ananassa HOM05D008321 ORTHO05D003768 1.2e-06 58.2 214 24.8
CANSAT25G0318 Cannabis sativa HOM05D007314 ORTHO05D010380 2.0e-06 57.4 135 34.8
FvH4_3g45091 Fragaria vesca HOM05D009091 ORTHO05D003768 2.0e-06 57.4 96 36.5
FvH4_5g18843 Fragaria vesca HOM05D008321 ORTHO05D003768 2.0e-06 57.4 238 27.3
Oeu047507.2 Olea europaea HOM05D007314 ORTHO05D003768 3.4e-06 56.6 112 33.9
TWI75G0500 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 3.4e-06 56.6 210 26.7
CiPaw.16G105200 Carya illinoinensis HOM05D001309 ORTHO05D000385 7.6e-06 55.5 206 25.7


User provided reference genes

Program Settings