Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021661 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 1.7e-39 165.6 90 100.0
CSS0048580 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 8.0e-37 156.8 90 94.4
CSS0009256 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 4.4e-35 151.0 90 88.9
CSS0049883 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 1.9e-33 145.6 85 90.6
CSS0037647 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 1.1e-30 136.3 88 85.2
CSS0019882 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 1.1e-28 129.8 74 91.9
CSS0036875 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 1.5e-27 125.9 74 90.5
CSS0028860 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 4.4e-27 124.4 74 87.8
CSS0031893 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 5.8e-27 124.0 74 87.8
CSS0041034 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 2.9e-26 121.7 73 86.3
CSS0018183 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 1.6e-24 115.9 69 89.9
CSS0048440 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 1.1e-20 103.2 59 89.8
Rhsim01G0023600 Rhododendron simsii HOM05D007659 ORTHO05D009227 3.5e-16 88.2 74 58.1
Dinv41341 Davidia involucrata HOM05D007659 ORTHO05D009227 1.1e-12 76.6 75 60.0
Actinidia28561 Actinidia chinensis HOM05D007659 ORTHO05D009227 2.6e-11 72.0 77 57.1
Hma1.2p1_1084F.1_g255330 Hydrangea macrophylla HOM05D007659 ORTHO05D009227 1.7e-10 69.3 75 54.7
Cfa019408 Carpinus fangiana HOM05D007659 ORTHO05D009227 1.9e-09 65.9 75 48.0
Haze_19128 Corylus avellana HOM05D007659 ORTHO05D009227 1.9e-09 65.9 75 49.3
Haze_19137 Corylus avellana HOM05D007659 ORTHO05D009227 3.2e-09 65.1 75 48.0
Nn8g40114 Nelumbo nucifera HOM05D007659 ORTHO05D009227 7.1e-09 63.9 77 46.8
vmacro13049 Vaccinium macrocarpon HOM05D007659 ORTHO05D009227 1.6e-08 62.8 57 54.4
Haze_19127 Corylus avellana HOM05D007659 ORTHO05D009227 2.1e-08 62.4 74 47.3
GSVIVG01023691001 Vitis vinifera HOM05D007659 ORTHO05D009227 2.1e-08 62.4 76 53.9
CANSAT11G2634 Cannabis sativa HOM05D007659 ORTHO05D009227 6.0e-08 60.8 59 50.8
Haze_19124 Corylus avellana HOM05D007659 ORTHO05D009227 1.0e-07 60.1 57 50.9
Haze_19136 Corylus avellana HOM05D007659 ORTHO05D009227 1.0e-07 60.1 57 52.6
CiPaw.15G164100 Carya illinoinensis HOM05D007659 ORTHO05D009227 2.3e-07 58.9 76 48.7
Haze_19129 Corylus avellana HOM05D007659 ORTHO05D009227 3.0e-07 58.5 57 50.9
QL02p094226 Quercus lobata HOM05D007659 ORTHO05D009227 3.9e-07 58.2 78 48.7
Aqoxy7G03300 Aquilegia oxysepala HOM05D007659 ORTHO05D009227 1.1e-06 56.6 85 38.8
Thhalv10026581m.g Eutrema salsugineum HOM05D007659 ORTHO05D009227 1.5e-06 56.2 63 52.4
MD12G1196500 Malus domestica HOM05D007659 ORTHO05D009227 2.5e-06 55.5 83 41.0
Cfa020779 Carpinus fangiana HOM05D001390 ORTHO05D001522 3.3e-06 55.1 44 56.8
Haze_27708 Corylus avellana HOM05D007659 ORTHO05D009227 3.3e-06 55.1 44 56.8
Duzib187G1272 Durio zibethinus HOM05D007659 ORTHO05D009227 4.3e-06 54.7 77 41.6
C07p58250 Brassica napus HOM05D007659 ORTHO05D009227 5.6e-06 54.3 45 62.2
BolC7t46283H Brassica oleracea HOM05D007659 ORTHO05D009227 5.6e-06 54.3 45 62.2
Carub.0007s0971 Capsella rubella HOM05D007659 ORTHO05D009227 5.6e-06 54.3 45 62.2
Ciclev10009916m.g Citrus clementina HOM05D007659 ORTHO05D009227 5.6e-06 54.3 80 40.0
Ah.06g188510 Amaranthus hybridus HOM05D000987 ORTHO05D000831 7.3e-06 53.9 74 37.8
A03p60380 Brassica napus HOM05D007659 ORTHO05D009227 9.6e-06 53.5 45 60.0
BraA03t15078Z Brassica rapa HOM05D007659 ORTHO05D009227 9.6e-06 53.5 45 60.0


User provided reference genes

Program Settings