Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021633 Camellia sinensis var. sinensis HOM05D000475 ORTHO05D030870 1.4e-102 376.7 254 100.0
CSS0043505 Camellia sinensis var. sinensis HOM05D000475 ORTHO05D030870 9.8e-72 274.2 272 79.0
CSS0003311 Camellia sinensis var. sinensis HOM05D000475 ORTHO05D000343 2.8e-58 229.6 273 71.4
CSS0039094 Camellia sinensis var. sinensis HOM05D000475 ORTHO05D000343 2.0e-32 143.7 290 54.1
Actinidia37197 Actinidia chinensis HOM05D000475 ORTHO05D000343 3.3e-19 99.8 87 65.5
Dinv04176 Davidia involucrata HOM05D000475 ORTHO05D000343 1.1e-14 84.7 289 40.8
Hma1.2p1_0615F.1_g189900 Hydrangea macrophylla HOM05D000475 ORTHO05D000343 4.2e-14 82.8 270 44.8
Rhsim01G0229100 Rhododendron simsii HOM05D000475 ORTHO05D000343 6.7e-12 75.5 36 88.9
SalBow3G1693 Salvia bowleyana HOM05D000475 ORTHO05D000343 1.9e-11 73.9 98 44.9
Lsat_1_v5_gn_5_170140 Lactuca sativa HOM05D000475 ORTHO05D000343 4.3e-11 72.8 119 40.3
QL01p031578 Quercus lobata HOM05D000475 ORTHO05D000343 4.3e-11 72.8 42 71.4
Lsat_1_v5_gn_5_170020 Lactuca sativa HOM05D000475 ORTHO05D000343 5.6e-11 72.4 115 40.9
Cc01_g12980 Coffea canephora HOM05D000475 ORTHO05D000343 7.4e-11 72.0 123 38.2
HanXRQChr17g0551461 Helianthus annuus HOM05D000475 ORTHO05D000343 7.4e-11 72.0 35 88.6
Atru.chr3.3942 Acer truncatum HOM05D000475 ORTHO05D000343 2.1e-10 70.5 122 37.7
ECA248G2685 Erigeron canadensis HOM05D000475 ORTHO05D000343 2.1e-10 70.5 42 71.4
Oeu022273.1 Olea europaea HOM05D000475 ORTHO05D000343 2.1e-10 70.5 36 83.3
Ah.08g217970 Amaranthus hybridus HOM05D000475 ORTHO05D000343 2.8e-10 70.1 35 85.7
Haze_24111 Corylus avellana HOM05D000475 ORTHO05D000343 2.8e-10 70.1 35 82.9
TAR633G1839 Trochodendron aralioides HOM05D000475 ORTHO05D000343 2.8e-10 70.1 35 82.9
Actinidia07029 Actinidia chinensis HOM05D000475 ORTHO05D000343 3.6e-10 69.7 35 85.7
Nn2g13362 Nelumbo nucifera HOM05D000475 ORTHO05D000343 3.6e-10 69.7 249 36.5
HPP92_019834 Vanilla planifolia HOM05D000475 ORTHO05D000343 3.6e-10 69.7 42 71.4
ATR0559G058 Amborella trichopoda HOM05D000475 ORTHO05D000343 4.8e-10 69.3 35 88.6
Aqoxy2G02215 Aquilegia oxysepala HOM05D000475 ORTHO05D000343 4.8e-10 69.3 35 82.9
ECA236G2884 Erigeron canadensis HOM05D000475 ORTHO05D000343 4.8e-10 69.3 123 38.2
MBI05_g28383_MAGBIO Magnolia biondii HOM05D000475 ORTHO05D000343 6.2e-10 68.9 35 82.9
MSTRG.21214 Avicennia marina HOM05D000475 ORTHO05D000343 8.1e-10 68.6 36 77.8
Manes.02G131800 Manihot esculenta HOM05D000475 ORTHO05D000343 8.1e-10 68.6 130 37.7
Cfa011514 Carpinus fangiana HOM05D000475 ORTHO05D000343 1.4e-09 67.8 35 80.0
Dinv17014 Davidia involucrata HOM05D000475 ORTHO05D000343 1.4e-09 67.8 36 83.3
Dinv42963 Davidia involucrata HOM05D000475 ORTHO05D000343 1.4e-09 67.8 36 83.3
Dinv43136 Davidia involucrata HOM05D000475 ORTHO05D000343 1.4e-09 67.8 36 83.3
DCAR_005966 Daucus carota HOM05D000475 ORTHO05D000343 1.8e-09 67.4 36 80.6
Ah.15g097520 Amaranthus hybridus HOM05D000475 ORTHO05D000343 2.4e-09 67.0 128 36.7
Migut.D02086 Erythranthe guttata HOM05D000475 ORTHO05D000343 2.4e-09 67.0 111 44.1
Lj1C151T1 Lonicera japonica HOM05D000475 ORTHO05D000343 3.1e-09 66.6 36 75.0
TAR636G2035 Trochodendron aralioides HOM05D000475 ORTHO05D000343 3.1e-09 66.6 248 26.6
AUR62001775 Chenopodium quinoa HOM05D000475 ORTHO05D000343 4.0e-09 66.2 117 35.0
Hund18900 Selenicereus undatus HOM05D000475 ORTHO05D000343 4.0e-09 66.2 117 36.8
Ciclev10027878m.g Citrus clementina HOM05D000475 ORTHO05D000343 6.9e-09 65.5 126 36.5
Sc12g0001480 Simmondsia chinensis HOM05D000475 ORTHO05D000343 6.9e-09 65.5 35 77.1
EL10Ac7g16030 Beta vulgaris HOM05D000475 ORTHO05D000343 1.2e-08 64.7 111 41.4
Actinidia07028 Actinidia chinensis HOM05D048495 ORTHO05D030870 1.5e-08 64.3 63 61.9
Solyc06g005570.4 Solanum lycopersicum HOM05D000475 ORTHO05D000343 1.5e-08 64.3 101 38.6
AUR62009563 Chenopodium quinoa HOM05D000475 ORTHO05D000343 2.0e-08 63.9 117 35.0
Peaxi162Scf00216g00027 Petunia axillaris HOM05D000475 ORTHO05D000343 2.0e-08 63.9 107 36.4
SGA_v2.0_scaffold41G15694 Striga asiatica HOM05D000475 ORTHO05D000343 2.6e-08 63.5 98 39.8
Nitab4.5_0003943g0010 Nicotiana tabacum HOM05D000475 ORTHO05D000343 3.4e-08 63.2 42 64.3
SGA_v2.0_scaffold203G41532 Striga asiatica HOM05D000475 ORTHO05D000343 3.4e-08 63.2 97 40.2
Sopen06g001530 Solanum pennellii HOM05D000475 ORTHO05D000343 4.5e-08 62.8 101 37.6
PGSC0003DMG400030416 Solanum tuberosum HOM05D019137 ORTHO05D025929 4.5e-08 62.8 42 64.3
Nitab4.5_0000272g0100 Nicotiana tabacum HOM05D000475 ORTHO05D000343 5.8e-08 62.4 119 37.0
CAN.G632.5 Capsicum annuum HOM05D000475 ORTHO05D000343 7.6e-08 62.0 105 37.1
CiPaw.13G093100 Carya illinoinensis HOM05D000475 ORTHO05D000343 7.6e-08 62.0 110 37.3
Sopen06g032670 Solanum pennellii HOM05D000475 ORTHO05D000343 9.9e-08 61.6 56 51.8
unitig_746.g26736 Utricularia gibba HOM05D000475 ORTHO05D000343 1.1e-06 58.2 35 71.4
Dinv17015 Davidia involucrata HOM05D048495 ORTHO05D180533 5.5e-06 55.8 180 55.6
Dinv42964 Davidia involucrata HOM05D000659 ORTHO05D000505 5.5e-06 55.8 180 55.6
Dinv43135 Davidia involucrata HOM05D000659 ORTHO05D000505 5.5e-06 55.8 180 55.6
SEGI_22052 Sequoiadendron giganteum HOM05D000475 ORTHO05D000343 7.1e-06 55.5 84 36.9


User provided reference genes

Program Settings