Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021629 Camellia sinensis var. sinensis HOM05D003549 ORTHO05D004223 1.8e-34 148.7 75 100.0
Actinidia33056 Actinidia chinensis HOM05D000215 ORTHO05D003454 1.9e-07 58.9 31 96.8
CSS0022405 Camellia sinensis var. sinensis HOM05D003549 ORTHO05D004223 9.4e-07 56.6 35 82.9
Rhsim12G0163400 Rhododendron simsii HOM05D003549 ORTHO05D004223 9.4e-07 56.6 30 96.7
Cfa019097 Carpinus fangiana HOM05D003549 ORTHO05D004223 1.6e-06 55.8 35 82.9
Haze_07495 Corylus avellana HOM05D003549 ORTHO05D004223 1.6e-06 55.8 31 90.3
Rhsim08G0170600 Rhododendron simsii HOM05D003549 ORTHO05D004223 1.6e-06 55.8 31 90.3
CiPaw.11G028500 Carya illinoinensis HOM05D003549 ORTHO05D004223 2.1e-06 55.5 31 87.1
Glyma.04G181200 Glycine max HOM05D003549 ORTHO05D004223 2.1e-06 55.5 31 90.3
Lj1g0007079 Lotus japonicus HOM05D003549 ORTHO05D004223 2.1e-06 55.5 31 90.3
Lj6g0023924 Lotus japonicus HOM05D003549 ORTHO05D004223 2.1e-06 55.5 31 90.3
Phvul.001G059000 Phaseolus vulgaris HOM05D003549 ORTHO05D004223 2.1e-06 55.5 31 90.3
Actinidia04982 Actinidia chinensis HOM05D000215 ORTHO05D003454 2.7e-06 55.1 29 96.6
AL8G14410 Arabidopsis lyrata HOM05D003549 ORTHO05D004223 2.7e-06 55.1 40 70.0
Haze_18696 Corylus avellana HOM05D003549 ORTHO05D004223 2.7e-06 55.1 30 90.0
Actinidia19094 Actinidia chinensis HOM05D003549 ORTHO05D004223 4.7e-06 54.3 31 83.9
CiPaw.12G025200 Carya illinoinensis HOM05D003549 ORTHO05D004223 4.7e-06 54.3 31 83.9
Thhalv10022469m.g Eutrema salsugineum HOM05D003549 ORTHO05D004223 4.7e-06 54.3 40 70.0
Glyma.17G198800 Glycine max HOM05D003549 ORTHO05D004223 4.7e-06 54.3 31 87.1
PGR083G2145 Punica granatum HOM05D003549 ORTHO05D004223 4.7e-06 54.3 30 90.0
Sp5g19250 Schrenkiella parvula HOM05D003549 ORTHO05D004223 4.7e-06 54.3 40 70.0
Glyma.14G134200 Glycine max HOM05D003549 ORTHO05D004223 6.1e-06 53.9 31 87.1
THA.LOC104823782 Tarenaya hassleriana HOM05D003549 ORTHO05D004223 6.1e-06 53.9 31 87.1
Potri.001G334600 Populus trichocarpa HOM05D003549 ORTHO05D004223 8.0e-06 53.5 31 87.1


User provided reference genes

Program Settings