Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021625 Camellia sinensis var. sinensis HOM05D002792 ORTHO05D003039 9.8e-40 166.8 114 100.0
CSS0011685 Camellia sinensis var. sinensis HOM05D002792 ORTHO05D003039 1.1e-38 163.3 114 99.1
CSS0034746 Camellia sinensis var. sinensis HOM05D002792 ORTHO05D003039 1.1e-38 163.3 114 99.1
CSS0039761 Camellia sinensis var. sinensis HOM05D002792 ORTHO05D003039 1.1e-38 163.3 114 99.1
CSS0043613 Camellia sinensis var. sinensis HOM05D002792 ORTHO05D003039 1.1e-38 163.3 114 99.1
CSS0002691 Camellia sinensis var. sinensis HOM05D002792 ORTHO05D003039 5.4e-38 161.0 114 98.2
CSS0048808 Camellia sinensis var. sinensis HOM05D002792 ORTHO05D003039 5.4e-38 161.0 114 97.4
CSS0027278 Camellia sinensis var. sinensis HOM05D002792 ORTHO05D003039 1.6e-37 159.5 114 98.2
CSS0041878 Camellia sinensis var. sinensis HOM05D002792 ORTHO05D003039 1.6e-37 159.5 114 95.6
Dinv27907 Davidia involucrata HOM05D002792 ORTHO05D003039 9.0e-17 90.5 57 80.7
Actinidia30279 Actinidia chinensis HOM05D002792 ORTHO05D003039 7.6e-16 87.4 87 59.8
TAR626G1718 Trochodendron aralioides HOM05D002792 ORTHO05D003039 7.6e-16 87.4 54 72.2
CiPaw.08G026100 Carya illinoinensis HOM05D002792 ORTHO05D003039 1.3e-15 86.7 55 80.0
vmacro11056 Vaccinium macrocarpon HOM05D002792 ORTHO05D003039 4.9e-15 84.7 54 79.6
Hma1.2p1_0049F.1_g028510 Hydrangea macrophylla HOM05D002792 ORTHO05D003039 8.4e-15 84.0 56 76.8
Rhsim02G0176900 Rhododendron simsii HOM05D002792 ORTHO05D003039 1.4e-14 83.2 52 80.8
CSS0012947 Camellia sinensis var. sinensis HOM05D002792 ORTHO05D003039 3.2e-14 82.0 81 60.5
Cc08_g09690 Coffea canephora HOM05D002792 ORTHO05D003039 4.2e-14 81.6 87 52.9
GSVIVG01035616001 Vitis vinifera HOM05D002792 ORTHO05D003039 7.1e-14 80.9 54 75.9
Oeu043885.1 Olea europaea HOM05D002792 ORTHO05D003039 2.7e-13 79.0 87 54.0
Sc23g0005200 Simmondsia chinensis HOM05D002792 ORTHO05D003039 7.9e-13 77.4 53 69.8
FvH4_2g35470 Fragaria vesca HOM05D002792 ORTHO05D003039 1.0e-12 77.0 87 50.6
FAN20G1676 Fragaria x ananassa HOM05D002792 ORTHO05D003039 1.0e-12 77.0 87 50.6
Prupe.1G447600 Prunus persica HOM05D002792 ORTHO05D003039 2.3e-12 75.9 87 50.6
Ciclev10009570m.g Citrus clementina HOM05D002792 ORTHO05D003039 3.9e-12 75.1 55 74.5
FAN15G1596 Fragaria x ananassa HOM05D002792 ORTHO05D003039 5.1e-12 74.7 88 51.1
Lj8A578G16 Lonicera japonica HOM05D002792 ORTHO05D003039 6.7e-12 74.3 87 49.4
RcHm_v2.0_Chr6g0306411 Rosa chinensis HOM05D002792 ORTHO05D003039 6.7e-12 74.3 88 51.1
Atru.chr7.2082 Acer truncatum HOM05D002792 ORTHO05D003039 1.5e-11 73.2 47 76.6
Sed0001182 Sechium edule HOM05D002792 ORTHO05D003039 1.5e-11 73.2 55 70.9
Nn2g11610 Nelumbo nucifera HOM05D002792 ORTHO05D003039 1.9e-11 72.8 87 47.1
ClCG11G015150 Citrullus lanatus HOM05D002792 ORTHO05D003039 2.5e-11 72.4 53 69.8
MELO3C003464.2 Cucumis melo HOM05D002792 ORTHO05D003039 2.5e-11 72.4 53 69.8
CsaV3_3G048550 Cucumis sativus L. HOM05D002792 ORTHO05D003039 2.5e-11 72.4 53 69.8
SalBow1G0964 Salvia bowleyana HOM05D002792 ORTHO05D003039 2.5e-11 72.4 87 49.4
Lj8C574G4 Lonicera japonica HOM05D002792 ORTHO05D003039 3.3e-11 72.0 51 70.6
Lsat_1_v5_gn_5_33680 Lactuca sativa HOM05D002792 ORTHO05D003039 4.3e-11 71.6 53 66.0
Lalb_Chr08g0243041 Lupinus albus HOM05D002792 ORTHO05D003039 4.3e-11 71.6 50 66.0
MD15G1092700 Malus domestica HOM05D002792 ORTHO05D003039 4.3e-11 71.6 45 77.8
Eucgr.C00554 Eucalyptus grandis HOM05D002792 ORTHO05D003039 5.6e-11 71.2 46 67.4
Lj1g0023402 Lotus japonicus HOM05D002792 ORTHO05D003039 5.6e-11 71.2 54 64.8
Thecc.09G045800 Theobroma cacao HOM05D002792 ORTHO05D003039 5.6e-11 71.2 53 67.9
PGSC0003DMG400002231 Solanum tuberosum HOM05D002792 ORTHO05D003039 7.4e-11 70.9 76 51.3
DCAR_000754 Daucus carota HOM05D002792 ORTHO05D003039 9.6e-11 70.5 46 63.0
Potri.006G237900 Populus trichocarpa HOM05D002792 ORTHO05D003039 9.6e-11 70.5 54 68.5
Hund19508 Selenicereus undatus HOM05D002792 ORTHO05D003039 9.6e-11 70.5 84 48.8
Medtr3g109700 Medicago truncatula HOM05D002792 ORTHO05D003039 1.6e-10 69.7 54 64.8
CAN.G400.15 Capsicum annuum HOM05D002792 ORTHO05D003039 2.1e-10 69.3 76 47.4
Eucgr.C00600 Eucalyptus grandis HOM05D002792 ORTHO05D003039 2.8e-10 68.9 47 68.1
Peaxi162Scf00227g00109 Petunia axillaris HOM05D002792 ORTHO05D003039 2.8e-10 68.9 42 73.8
Phvul.009G110200 Phaseolus vulgaris HOM05D002792 ORTHO05D003039 2.8e-10 68.9 42 76.2
CANSAT25G1031 Cannabis sativa HOM05D002792 ORTHO05D003039 4.8e-10 68.2 50 68.0
Glyma.04G084600 Glycine max HOM05D002792 ORTHO05D003039 4.8e-10 68.2 42 76.2
Nitab4.5_0001515g0040 Nicotiana tabacum HOM05D002792 ORTHO05D003039 4.8e-10 68.2 46 67.4
QL12p041309 Quercus lobata HOM05D002792 ORTHO05D003039 4.8e-10 68.2 58 62.1
Sabra06G0186200 Salix brachista HOM05D002792 ORTHO05D003039 4.8e-10 68.2 54 66.7
arahy.Tifrunner.gnm1.ann1.FW97GV Arachis hypogaea HOM05D002792 ORTHO05D003039 6.2e-10 67.8 41 75.6
Manes.03G059000 Manihot esculenta HOM05D002792 ORTHO05D003039 6.2e-10 67.8 55 65.5
arahy.Tifrunner.gnm1.ann1.GFJ9I4 Arachis hypogaea HOM05D002792 ORTHO05D003039 8.1e-10 67.4 39 76.9
EL10Ac2g04008 Beta vulgaris HOM05D002792 ORTHO05D003039 8.1e-10 67.4 42 73.8
Glyma.06G086200 Glycine max HOM05D002792 ORTHO05D003039 8.1e-10 67.4 42 76.2
Sopen08g020380 Solanum pennellii HOM05D002792 ORTHO05D003039 8.1e-10 67.4 81 45.7
Solyc08g066540.3 Solanum lycopersicum HOM05D002792 ORTHO05D003039 1.1e-09 67.0 72 51.4
Eucgr.C02937 Eucalyptus grandis HOM05D002792 ORTHO05D003039 1.4e-09 66.6 42 66.7
HanXRQChr16g0509381 Helianthus annuus HOM05D002792 ORTHO05D003039 1.8e-09 66.2 53 64.2
Psat5g021080 Pisum sativum HOM05D002792 ORTHO05D003039 4.0e-09 65.1 46 63.0
PGR031G0555 Punica granatum HOM05D002792 ORTHO05D003039 5.3e-09 64.7 42 69.0
Gorai.009G049500 Gossypium raimondii HOM05D002792 ORTHO05D003039 6.9e-09 64.3 42 76.2
THA.LOC104803806 Tarenaya hassleriana HOM05D002792 ORTHO05D003039 6.9e-09 64.3 54 61.1
Nitab4.5_0003794g0060 Nicotiana tabacum HOM05D002792 ORTHO05D003039 9.0e-09 63.9 46 63.0
AUR62042437 Chenopodium quinoa HOM05D002792 ORTHO05D003039 7.6e-08 60.8 51 56.9
AUR62009270 Chenopodium quinoa HOM05D002792 ORTHO05D003039 9.9e-08 60.5 51 56.9
Glyma.14G143300 Glycine max HOM05D002792 ORTHO05D003039 1.7e-07 59.7 43 65.1
Aqoxy7G03895 Aquilegia oxysepala HOM05D002792 ORTHO05D003039 2.2e-07 59.3 54 51.9
PSO210G0529 Papaver somniferum HOM05D002792 ORTHO05D003039 2.9e-07 58.9 91 41.8
PSO210G7550 Papaver somniferum HOM05D002792 ORTHO05D003039 3.8e-07 58.5 91 41.8
Migut.E01530 Erythranthe guttata HOM05D002792 ORTHO05D003039 6.4e-07 57.8 43 58.1
ECA246G3749 Erigeron canadensis HOM05D002792 ORTHO05D003039 1.4e-06 56.6 54 50.0
TWI34G0935 Tripterygium wilfordii HOM05D002792 ORTHO05D003039 1.9e-06 56.2 43 65.1
unitig_37.g12923 Utricularia gibba HOM05D002792 ORTHO05D003039 5.5e-06 54.7 72 47.2


User provided reference genes

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