Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021578 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 0.0e+00 1525.0 773 100.0
Dinv31841 Davidia involucrata HOM05D007378 ORTHO05D007577 2.9e-212 742.7 794 55.9
Dinv39514 Davidia involucrata HOM05D007378 ORTHO05D007577 4.7e-178 629.0 734 54.8
Actinidia15419 Actinidia chinensis HOM05D007378 ORTHO05D007577 4.4e-176 622.5 796 51.0
Actinidia16984 Actinidia chinensis HOM05D007378 ORTHO05D007577 9.3e-166 588.2 711 52.5
CSS0029124 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 1.9e-155 553.9 337 86.9
Rhsim07G0247100 Rhododendron simsii HOM05D007378 ORTHO05D007577 6.2e-154 548.9 715 49.5
Hma1.2p1_0023F.1_g015450 Hydrangea macrophylla HOM05D007378 ORTHO05D007577 2.0e-144 517.3 757 48.0
QL02p011519 Quercus lobata HOM05D007378 ORTHO05D007577 2.2e-127 460.7 820 43.0
vmacro21724 Vaccinium macrocarpon HOM05D007378 ORTHO05D007577 6.5e-119 432.6 618 48.9
Haze_22630 Corylus avellana HOM05D007378 ORTHO05D007577 4.0e-116 423.3 810 41.6
Cfa013945 Carpinus fangiana HOM05D007378 ORTHO05D007577 8.8e-116 422.2 800 41.0
CSS0010969 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 2.2e-106 391.0 446 54.5
GSVIVG01009901001 Vitis vinifera HOM05D007378 ORTHO05D007577 7.0e-105 386.0 702 42.9
Prupe.1G365800 Prunus persica HOM05D007378 ORTHO05D007577 7.7e-104 382.5 805 37.8
MD15G1012700 Malus domestica HOM05D007378 ORTHO05D007577 8.6e-103 379.0 804 37.4
MD08G1013300 Malus domestica HOM05D007378 ORTHO05D007577 5.5e-102 376.3 813 37.0
Thecc.08G043900 Theobroma cacao HOM05D007378 ORTHO05D007577 8.0e-101 372.5 843 36.1
Duzib093G0923 Durio zibethinus HOM05D007378 ORTHO05D007577 6.8e-100 369.4 795 37.1
TAR381G0696 Trochodendron aralioides HOM05D007378 ORTHO05D007577 1.1e-97 362.1 711 38.1
CSS0024961 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 9.2e-97 359.0 352 60.8
COL.COLO4_26152 Corchorus olitorius HOM05D007378 ORTHO05D007577 2.7e-96 357.5 845 36.8
CiPaw.07G150400 Carya illinoinensis HOM05D007378 ORTHO05D007577 2.9e-95 354.0 722 39.2
CiPaw.08G066200 Carya illinoinensis HOM05D007378 ORTHO05D007577 1.6e-93 348.2 788 37.4
Potri.005G238800 Populus trichocarpa HOM05D007378 ORTHO05D007577 4.7e-93 346.7 829 36.7
Ciclev10000382m.g Citrus clementina HOM05D007378 ORTHO05D007577 9.8e-91 339.0 813 36.0
Duzib116G0067 Durio zibethinus HOM05D007378 ORTHO05D007577 6.0e-88 329.7 744 36.0
Potri.002G022800 Populus trichocarpa HOM05D007378 ORTHO05D007577 1.0e-87 328.9 846 36.3
Cpa.g.sc26.38 Carica papaya HOM05D007378 ORTHO05D007577 1.1e-86 325.5 766 35.8
Manes.05G147800 Manihot esculenta HOM05D007378 ORTHO05D007577 1.2e-83 315.5 711 37.3
TWI12G0183 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 2.0e-83 314.7 839 34.4
RcHm_v2.0_Chr6g0302801 Rosa chinensis HOM05D007378 ORTHO05D007577 2.3e-79 301.2 801 34.1
Eucgr.F00598 Eucalyptus grandis HOM05D007378 ORTHO05D007577 1.9e-78 298.1 822 35.3
DCAR_013867 Daucus carota HOM05D007378 ORTHO05D007577 2.1e-77 294.7 760 33.6
Sopen04g035030 Solanum pennellii HOM05D007378 ORTHO05D007577 6.2e-77 293.1 731 35.0
FvH4_2g38520 Fragaria vesca HOM05D007378 ORTHO05D007577 1.4e-76 292.0 784 34.2
TWI36G1616 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 1.4e-76 292.0 836 33.4
Manes.18G013740 Manihot esculenta HOM05D007378 ORTHO05D007577 3.1e-76 290.8 743 35.7
TWI56G0017 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 3.1e-76 290.8 757 37.1
PGSC0003DMG400009935 Solanum tuberosum HOM05D007378 ORTHO05D007577 6.8e-76 289.7 727 34.1
Solyc04g081420.4 Solanum lycopersicum HOM05D007378 ORTHO05D007577 2.0e-75 288.1 731 34.7
CAN.G311.27 Capsicum annuum HOM05D007378 ORTHO05D007577 4.4e-75 287.0 732 34.7
Nn5g30152 Nelumbo nucifera HOM05D007378 ORTHO05D007577 4.4e-75 287.0 779 35.3
Sabra02G0018600 Salix brachista HOM05D007378 ORTHO05D007577 2.2e-74 284.6 788 34.9
Cc10_g01700 Coffea canephora HOM05D007378 ORTHO05D007577 1.9e-73 281.6 728 34.6
FAN15G3724 Fragaria x ananassa HOM05D007378 ORTHO05D007577 5.4e-73 280.0 824 32.6
Sabra05G0184500 Salix brachista HOM05D007378 ORTHO05D007577 1.1e-70 272.3 848 33.5
FAN20G0665 Fragaria x ananassa HOM05D007378 ORTHO05D007577 5.6e-70 270.0 745 33.4
FAN27G0575 Fragaria x ananassa HOM05D007378 ORTHO05D007577 2.8e-69 267.7 793 33.0
Peaxi162Scf00438g00718 Petunia axillaris HOM05D007378 ORTHO05D007577 1.8e-68 265.0 732 33.2
MBI05_g30742_MAGBIO Magnolia biondii HOM05D007378 ORTHO05D007577 1.2e-67 262.3 806 34.0
Nitab4.5_0002561g0040 Nicotiana tabacum HOM05D007378 ORTHO05D007577 1.7e-66 258.5 731 33.2
Oeu020868.1 Olea europaea HOM05D007378 ORTHO05D007577 2.2e-66 258.1 610 35.2
Glyma.04G024500 Glycine max HOM05D007378 ORTHO05D007577 3.8e-66 257.3 762 32.8
Atru.chr13.296 Acer truncatum HOM05D007378 ORTHO05D007577 1.1e-65 255.8 589 35.7
Glyma.17G258000 Glycine max HOM05D007378 ORTHO05D007577 1.1e-62 245.7 750 31.1
vmacro04350 Vaccinium macrocarpon HOM05D007378 ORTHO05D007577 1.5e-62 245.4 299 50.2
Glyma.06G024600 Glycine max HOM05D007378 ORTHO05D007577 8.1e-61 239.6 810 32.2
MSTRG.25246 Avicennia marina HOM05D007378 ORTHO05D007577 4.0e-60 237.3 728 32.6
VMungo0647G1459 Vigna mungo HOM05D007378 ORTHO05D007577 1.5e-59 235.3 759 31.0
Phvul.001G006800 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 5.8e-59 233.4 750 31.2
Glyma.14G219000 Glycine max HOM05D007378 ORTHO05D007577 2.9e-58 231.1 751 31.6
Sc15g0005020 Simmondsia chinensis HOM05D007378 ORTHO05D007577 3.5e-56 224.2 770 29.0
Psat5g013200 Pisum sativum HOM05D007378 ORTHO05D007577 6.0e-56 223.4 792 30.4
Duzib041G0283 Durio zibethinus HOM05D007378 ORTHO05D007577 7.9e-56 223.0 419 37.9
Ca_15483_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 1.3e-55 222.2 780 30.9
Phvul.009G016700 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 3.9e-55 220.7 750 32.3
Lalb_Chr11g0061931 Lupinus albus HOM05D007378 ORTHO05D007577 1.5e-54 218.8 771 30.1
PGR031G0679 Punica granatum HOM05D007378 ORTHO05D007577 8.1e-53 213.0 762 30.2
Medtr3g113840 Medicago truncatula HOM05D007378 ORTHO05D007577 4.5e-51 207.2 777 29.9
TPR.G34540 Trifolium pratense HOM05D007378 ORTHO05D007577 7.6e-51 206.5 766 30.0
VMungo1309G2950 Vigna mungo HOM05D007378 ORTHO05D007577 1.3e-50 205.7 798 30.1
CSS0034917 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 1.7e-50 205.3 111 93.7
arahy.Tifrunner.gnm1.ann1.WP2VUZ Arachis hypogaea HOM05D007378 ORTHO05D007577 3.8e-50 204.1 787 30.7
arahy.Tifrunner.gnm1.ann1.KUKA7T Arachis hypogaea HOM05D007378 ORTHO05D007577 6.4e-50 203.4 787 30.4
Lj5g0002996 Lotus japonicus HOM05D007378 ORTHO05D007577 1.4e-49 202.2 773 30.1
Lj1g0027004 Lotus japonicus HOM05D007378 ORTHO05D007577 1.6e-48 198.7 795 30.1
Hund05208 Selenicereus undatus HOM05D007378 ORTHO05D007577 3.5e-48 197.6 793 28.5
Aqoxy5G01785 Aquilegia oxysepala HOM05D007378 ORTHO05D007577 5.1e-47 193.7 787 29.1
CANSAT25G3202 Cannabis sativa HOM05D007378 ORTHO05D007577 7.4e-46 189.9 781 30.2
PSO170G0005 Papaver somniferum HOM05D007378 ORTHO05D007577 2.4e-44 184.9 721 29.8
Ca_13427_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 2.0e-43 181.8 741 29.3
AUR62033831 Chenopodium quinoa HOM05D007378 ORTHO05D007577 3.4e-43 181.0 750 28.9
PSO700G0360 Papaver somniferum HOM05D007378 ORTHO05D007577 1.0e-42 179.5 769 29.3
Lalb_Chr08g0246161 Lupinus albus HOM05D007378 ORTHO05D007577 4.9e-42 177.2 603 28.2
SalBow7G4715 Salvia bowleyana HOM05D007378 ORTHO05D007577 5.1e-39 167.2 719 29.2
Medtr1g025180 Medicago truncatula HOM05D007378 ORTHO05D007577 7.4e-38 163.3 746 28.7
AUR62035752 Chenopodium quinoa HOM05D007378 ORTHO05D007577 2.6e-35 154.8 622 29.9
TPR.G26373 Trifolium pratense HOM05D007378 ORTHO05D007577 2.6e-35 154.8 705 27.4
Psat6g003040 Pisum sativum HOM05D007378 ORTHO05D007577 2.2e-29 135.2 660 26.8
Migut.C00828 Erythranthe guttata HOM05D007378 ORTHO05D007577 4.8e-29 134.0 718 25.9
Sp5g30850 Schrenkiella parvula HOM05D010473 ORTHO05D007577 9.0e-28 129.8 789 26.0
Aa31LG4G5960 Aethionema arabicum HOM05D010473 ORTHO05D007577 1.2e-27 129.4 785 26.4
Duzib041G0240 Durio zibethinus HOM05D007378 ORTHO05D007577 8.5e-26 123.2 335 35.2
Thhalv10018322m.g Eutrema salsugineum HOM05D010473 ORTHO05D007577 2.1e-24 118.6 783 27.2
Lj4A25T50 Lonicera japonica HOM05D007378 ORTHO05D007577 1.4e-23 115.9 295 34.9
AL2G35720 Arabidopsis lyrata HOM05D010473 ORTHO05D007577 3.9e-23 114.4 780 25.4
THA.LOC104814031 Tarenaya hassleriana HOM05D010473 ORTHO05D007577 8.8e-23 113.2 722 27.4
AT1G75730 Arabidopsis thaliana HOM05D010473 ORTHO05D007577 1.1e-22 112.8 775 25.3
BcaB05g24937 Brassica carinata HOM05D010473 ORTHO05D007577 1.7e-21 109.0 706 27.2
CARHR069140 Cardamine hirsuta HOM05D010473 ORTHO05D007577 3.7e-21 107.8 760 24.7
TAR625G0788 Trochodendron aralioides HOM05D000628 ORTHO05D001121 3.1e-20 104.8 245 34.7
BcaC03g15618 Brassica carinata HOM05D010473 ORTHO05D007577 9.1e-20 103.2 755 24.4
C02p33740 Brassica napus HOM05D010473 ORTHO05D007577 9.1e-20 103.2 788 24.7
BraA02t07054Z Brassica rapa HOM05D010473 ORTHO05D007577 1.5e-19 102.4 703 25.2
SGA_v2.0_scaffold92G28233 Striga asiatica HOM05D007378 ORTHO05D007577 4.5e-19 100.9 696 24.1
Carub.0002s2258 Capsella rubella HOM05D010473 ORTHO05D007577 1.0e-18 99.8 784 24.9
BolC2t09331H Brassica oleracea HOM05D010473 ORTHO05D007577 2.9e-18 98.2 719 24.3
A02p20200 Brassica napus HOM05D010473 ORTHO05D007577 2.5e-17 95.1 704 25.4
ATR0152G004 Amborella trichopoda HOM05D007378 ORTHO05D007577 1.3e-10 72.8 476 25.0
BcaC08g47058 Brassica carinata HOM05D010473 ORTHO05D007577 6.5e-10 70.5 297 29.3
BraA07t31661Z Brassica rapa HOM05D010473 ORTHO05D007577 1.1e-09 69.7 478 25.5
Atru.chr13.297 Acer truncatum HOM05D007378 ORTHO05D007577 5.5e-09 67.4 105 41.9
Atru.chr13.298 Acer truncatum HOM05D007378 ORTHO05D007577 1.6e-08 65.9 95 44.2
Lsat_1_v5_gn_2_9361 Lactuca sativa HOM05D037282 ORTHO05D035104 2.3e-07 62.0 58 53.4
C06p49680 Brassica napus HOM05D010473 ORTHO05D007577 5.2e-07 60.8 476 24.4
SGA_v2.0_scaffold11G05915 Striga asiatica HOM05D007378 ORTHO05D007577 5.2e-07 60.8 340 27.1
BolC6t40007H Brassica oleracea HOM05D010473 ORTHO05D007577 9.7e-06 56.6 477 25.6


User provided reference genes

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