Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021566 Camellia sinensis var. sinensis HOM05D006127 ORTHO05D007465 0.0e+00 1093.6 583 100.0
CSS0002355 Camellia sinensis var. sinensis HOM05D006127 ORTHO05D007465 6.3e-308 1060.1 583 97.8
Actinidia34165 Actinidia chinensis HOM05D006127 ORTHO05D007465 5.4e-227 791.2 566 74.9
Dinv35267 Davidia involucrata HOM05D006127 ORTHO05D007465 1.1e-224 783.5 565 75.4
Dinv28380 Davidia involucrata HOM05D006127 ORTHO05D007465 1.0e-209 733.8 577 71.9
Cfa016302 Carpinus fangiana HOM05D006127 ORTHO05D007465 2.1e-202 709.5 563 68.6
Ciclev10004691m.g Citrus clementina HOM05D006127 ORTHO05D007465 1.1e-200 703.7 561 67.9
QL09p012458 Quercus lobata HOM05D006127 ORTHO05D007465 1.7e-199 699.9 559 68.0
Gorai.003G069400 Gossypium raimondii HOM05D006127 ORTHO05D007465 5.9e-197 691.4 556 68.3
Thecc.03G186000 Theobroma cacao HOM05D006127 ORTHO05D007465 7.7e-197 691.0 560 67.7
MD07G1280200 Malus domestica HOM05D006127 ORTHO05D007465 3.8e-196 688.7 565 67.4
COL.COLO4_30292 Corchorus olitorius HOM05D006127 ORTHO05D007465 5.0e-196 688.3 535 69.7
Gohir.D11G229300 Gossypium hirsutum HOM05D006127 ORTHO05D007465 1.1e-195 687.2 556 67.4
Atru.chr1.338 Acer truncatum HOM05D006127 ORTHO05D007465 2.5e-195 686.0 544 67.5
Gohir.A11G225200 Gossypium hirsutum HOM05D006127 ORTHO05D007465 3.2e-195 685.6 557 67.9
Prupe.2G302400 Prunus persica HOM05D006127 ORTHO05D007465 9.4e-195 684.1 556 67.6
Manes.06G153500 Manihot esculenta HOM05D006127 ORTHO05D007465 8.8e-193 677.6 568 65.3
Potri.017G148900 Populus trichocarpa HOM05D006127 ORTHO05D007465 1.1e-192 677.2 558 65.8
TWI23G0320 Tripterygium wilfordii HOM05D006127 ORTHO05D007465 5.7e-192 674.9 564 65.2
Sabra17G0124200 Salix brachista HOM05D006127 ORTHO05D007465 7.4e-192 674.5 564 64.9
CiPaw.06G004100 Carya illinoinensis HOM05D006127 ORTHO05D007465 1.3e-191 673.7 555 65.9
MSTRG.8699 Avicennia marina HOM05D006127 ORTHO05D007465 7.7e-189 664.5 567 63.3
Eucgr.A02719 Eucalyptus grandis HOM05D006127 ORTHO05D007465 1.3e-188 663.7 562 64.4
Potri.004G072100 Populus trichocarpa HOM05D006127 ORTHO05D007465 1.7e-188 663.3 541 66.4
TAR374G0777 Trochodendron aralioides HOM05D006127 ORTHO05D007465 8.5e-188 661.0 469 73.1
MD01G1210100 Malus domestica HOM05D006127 ORTHO05D007465 2.5e-187 659.4 454 74.2
Nitab4.5_0000472g0230 Nicotiana tabacum HOM05D006127 ORTHO05D007465 1.0e-185 654.1 464 73.9
Lj1A1007G54 Lonicera japonica HOM05D006127 ORTHO05D007465 1.8e-185 653.3 488 71.7
PGSC0003DMG400009503 Solanum tuberosum HOM05D006127 ORTHO05D007465 1.5e-184 650.2 464 73.3
Peaxi162Scf00444g00314 Petunia axillaris HOM05D006127 ORTHO05D007465 3.3e-184 649.0 463 74.5
CsaV3_5G001020 Cucumis sativus L. HOM05D006127 ORTHO05D007465 4.4e-184 648.7 555 62.9
Solyc03g007620.3 Solanum lycopersicum HOM05D006127 ORTHO05D007465 2.8e-183 646.0 464 72.6
CiPaw.05G261300 Carya illinoinensis HOM05D006127 ORTHO05D007465 3.7e-183 645.6 443 73.1
ClCG01G000890 Citrullus lanatus HOM05D006127 ORTHO05D007465 3.7e-183 645.6 555 62.9
HanXRQChr00c0486g0575011 Helianthus annuus HOM05D006127 ORTHO05D007465 3.7e-183 645.6 557 61.8
Glyma.09G129300 Glycine max HOM05D006127 ORTHO05D007465 4.8e-183 645.2 564 62.9
Sopen03g003570 Solanum pennellii HOM05D006127 ORTHO05D007465 6.3e-183 644.8 464 72.6
Ca_26803_v3 Cicer arietinum L. HOM05D006127 ORTHO05D007465 8.2e-183 644.4 567 62.3
PGR044G2596 Punica granatum HOM05D006127 ORTHO05D007465 4.1e-182 642.1 532 64.8
Phvul.004G105900 Phaseolus vulgaris HOM05D006127 ORTHO05D007465 1.6e-181 640.2 570 61.8
Nitab4.5_0001331g0020 Nicotiana tabacum HOM05D006127 ORTHO05D007465 3.8e-180 635.6 473 71.5
Haze_00059 Corylus avellana HOM05D006127 ORTHO05D007465 5.0e-180 635.2 561 63.5
Lj2g0027649 Lotus japonicus HOM05D006127 ORTHO05D007465 6.5e-180 634.8 566 61.7
CAN.G236.3 Capsicum annuum HOM05D006127 ORTHO05D007465 2.5e-179 632.9 464 71.3
MELO3C005842.2 Cucumis melo HOM05D006127 ORTHO05D007465 2.5e-179 632.9 556 61.7
Thhalv10003967m.g Eutrema salsugineum HOM05D006127 ORTHO05D007465 3.2e-179 632.5 566 61.1
Migut.F00277 Erythranthe guttata HOM05D006127 ORTHO05D007465 4.2e-179 632.1 571 61.5
Sabra04G0047500 Salix brachista HOM05D006127 ORTHO05D007465 5.5e-179 631.7 605 59.3
AT5G62650 Arabidopsis thaliana HOM05D006127 ORTHO05D007465 9.4e-179 630.9 565 61.9
Rhsim03G0192200 Rhododendron simsii HOM05D006127 ORTHO05D007465 2.1e-178 629.8 557 64.3
Carub.0008s2341 Capsella rubella HOM05D006127 ORTHO05D007465 1.8e-177 626.7 562 61.6
ECA232G4568 Erigeron canadensis HOM05D006127 ORTHO05D007465 4.0e-177 625.5 464 69.0
AL8G39630 Arabidopsis lyrata HOM05D006127 ORTHO05D007465 2.6e-176 622.9 565 61.2
THA.LOC104818243 Tarenaya hassleriana HOM05D006127 ORTHO05D007465 3.4e-176 622.5 542 62.9
Medtr6g053110 Medicago truncatula HOM05D006127 ORTHO05D007465 1.7e-175 620.2 566 61.3
CARHR276460 Cardamine hirsuta HOM05D006127 ORTHO05D007465 1.1e-174 617.5 566 61.7
Lalb_Chr01g0009501 Lupinus albus HOM05D006127 ORTHO05D007465 1.1e-174 617.5 515 65.0
RcHm_v2.0_Chr1g0378611 Rosa chinensis HOM05D006127 ORTHO05D007465 1.8e-174 616.7 524 64.9
Sed0008008 Sechium edule HOM05D006127 ORTHO05D007465 1.8e-174 616.7 555 59.8
Aa31LG11G990 Aethionema arabicum HOM05D006127 ORTHO05D007465 9.1e-174 614.4 560 61.8
Sp2g25830 Schrenkiella parvula HOM05D006127 ORTHO05D007465 1.2e-173 614.0 568 60.7
Sc13g0009280 Simmondsia chinensis HOM05D006127 ORTHO05D007465 5.9e-173 611.7 507 65.7
Gorai.006G199600 Gossypium raimondii HOM05D006127 ORTHO05D007465 1.0e-172 610.9 518 63.3
Lsat_1_v5_gn_9_56840 Lactuca sativa HOM05D006127 ORTHO05D007465 1.7e-172 610.1 558 61.8
Nn6g32416 Nelumbo nucifera HOM05D006127 ORTHO05D007465 3.8e-172 609.0 533 63.2
PSO478G4852 Papaver somniferum HOM05D006127 ORTHO05D007465 5.0e-172 608.6 572 59.8
arahy.Tifrunner.gnm1.ann1.AR9FJK Arachis hypogaea HOM05D006127 ORTHO05D007465 2.5e-171 606.3 575 59.8
arahy.Tifrunner.gnm1.ann1.HXNP43 Arachis hypogaea HOM05D006127 ORTHO05D007465 3.2e-171 605.9 562 60.3
FAN10G2357 Fragaria x ananassa HOM05D006127 ORTHO05D007465 9.4e-171 604.4 540 62.4
Gohir.D09G177600 Gossypium hirsutum HOM05D006127 ORTHO05D007465 9.4e-171 604.4 518 62.7
FAN06G3350 Fragaria x ananassa HOM05D006127 ORTHO05D007465 1.2e-170 604.0 540 63.0
FAN10G0315 Fragaria x ananassa HOM05D006127 ORTHO05D007465 1.2e-170 604.0 540 62.4
PSO266G0017 Papaver somniferum HOM05D006127 ORTHO05D007465 1.6e-170 603.6 582 59.1
FAN03G2078 Fragaria x ananassa HOM05D006127 ORTHO05D007465 6.1e-170 601.7 541 62.5
FAN03G3352 Fragaria x ananassa HOM05D006127 ORTHO05D007465 8.0e-170 601.3 541 62.5
BraA06t25889Z Brassica rapa HOM05D006127 ORTHO05D007465 1.4e-169 600.5 560 58.9
BcaC01g02503 Brassica carinata HOM05D006127 ORTHO05D007465 2.3e-169 599.7 560 58.9
A06p29390 Brassica napus HOM05D006127 ORTHO05D007465 2.3e-169 599.7 560 59.1
Cc02_g02250 Coffea canephora HOM05D006127 ORTHO05D007465 4.0e-169 599.0 437 69.8
FAN06G1782 Fragaria x ananassa HOM05D006127 ORTHO05D007465 6.8e-169 598.2 527 62.8
BolC3t18667H Brassica oleracea HOM05D006127 ORTHO05D007465 1.7e-167 593.6 560 58.6
vmacro06616 Vaccinium macrocarpon HOM05D006127 ORTHO05D007465 1.7e-167 593.6 554 62.5
C03p64120 Brassica napus HOM05D006127 ORTHO05D007465 8.3e-167 591.3 560 58.4
Glyma.16G177100 Glycine max HOM05D006127 ORTHO05D007465 5.4e-166 588.6 559 58.7
GSVIVG01028824001 Vitis vinifera HOM05D006127 ORTHO05D007465 5.4e-166 588.6 438 69.2
DCAR_008898 Daucus carota HOM05D006127 ORTHO05D007465 9.2e-166 587.8 536 59.9
BcaB02g09667 Brassica carinata HOM05D006127 ORTHO05D007465 2.7e-165 586.3 564 59.0
EL10Ac3g05405 Beta vulgaris HOM05D006127 ORTHO05D007465 4.5e-165 585.5 567 58.7
SGA_v2.0_scaffold60G21123 Striga asiatica HOM05D006127 ORTHO05D007465 4.5e-165 585.5 567 58.0
Gohir.A09G182900 Gossypium hirsutum HOM05D006127 ORTHO05D007465 1.0e-164 584.3 503 62.4
AUR62031438 Chenopodium quinoa HOM05D006127 ORTHO05D007465 6.6e-164 581.6 466 65.5
HanXRQChr15g0494171 Helianthus annuus HOM05D006127 ORTHO05D007465 4.3e-163 578.9 556 57.9
Oeu003330.1 Olea europaea HOM05D006127 ORTHO05D007465 1.2e-162 577.4 420 68.1
Aqoxy7G00200 Aquilegia oxysepala HOM05D006127 ORTHO05D007465 4.4e-160 568.9 476 64.1
Hund04798 Selenicereus undatus HOM05D006127 ORTHO05D007465 7.0e-158 561.6 690 49.1
Ah.07g206460 Amaranthus hybridus HOM05D006127 ORTHO05D007465 8.6e-156 554.7 552 57.4
unitig_747.g21859 Utricularia gibba HOM05D006127 ORTHO05D007465 1.7e-151 540.4 580 54.1
Cpa.g.sc107.127 Carica papaya HOM05D006127 ORTHO05D007465 7.0e-150 535.0 453 63.8
ATR0721G168 Amborella trichopoda HOM05D006127 ORTHO05D007465 3.3e-147 526.2 545 55.0
Ah.13g069260 Amaranthus hybridus HOM05D006127 ORTHO05D007465 2.3e-145 520.0 414 64.3
AUR62021102 Chenopodium quinoa HOM05D006127 ORTHO05D007465 4.4e-144 515.8 466 60.5
CDE04G3725 Ceratophyllum demersum HOM05D006127 ORTHO05D007465 2.4e-142 510.0 513 55.0
TPR.G9177 Trifolium pratense HOM05D006127 ORTHO05D007465 5.2e-137 492.3 357 72.5
Psat0s2186g0040 Pisum sativum HOM05D006127 ORTHO05D007465 6.8e-137 491.9 395 67.8
Zm00001eb119480 Zea mays HOM05D006127 ORTHO05D007465 9.9e-136 488.0 537 51.8
FvH4_7g30450 Fragaria vesca HOM05D006127 ORTHO05D007465 2.3e-132 476.9 371 69.5
HPP92_008801 Vanilla planifolia HOM05D006127 ORTHO05D007465 1.4e-129 467.6 506 52.2
Oeu027861.1 Olea europaea HOM05D006127 ORTHO05D007465 1.3e-111 407.9 429 55.5
Nn1g01683 Nelumbo nucifera HOM05D006127 ORTHO05D007465 5.6e-107 392.5 558 46.2
VMungo0464G0768 Vigna mungo HOM05D006127 ORTHO05D007465 6.5e-103 379.0 330 65.2
BcaB02g09671 Brassica carinata HOM05D006127 ORTHO05D007465 8.7e-100 368.6 518 47.9
HPP92_005266 Vanilla planifolia HOM05D006127 ORTHO05D007465 5.9e-96 355.9 395 50.6
CDE03G0317 Ceratophyllum demersum HOM05D006127 ORTHO05D007465 8.2e-90 335.5 291 58.1
SGA_v2.0_scaffold192G40622 Striga asiatica HOM05D006127 ORTHO05D007465 2.2e-87 327.4 262 66.0
FAN01G1207 Fragaria x ananassa HOM05D006127 ORTHO05D007465 5.0e-71 273.1 249 63.9
Os01g0225300 Oryza sativa ssp. japonica HOM05D006127 ORTHO05D007465 2.1e-69 267.7 291 53.3
Mapoly0009s0032 Marchantia polymorpha HOM05D006127 ORTHO05D007465 6.1e-69 266.2 515 36.1
AagrBONN_evm.TU.Sc2ySwM_368.2100 Anthoceros agrestis HOM05D006127 ORTHO05D007465 2.0e-64 251.1 459 36.8
Pp3c17_22580 Physcomitrium patens HOM05D006127 ORTHO05D007465 8.0e-53 212.6 576 29.2
arahy.Tifrunner.gnm1.ann1.KML1I1 Arachis hypogaea HOM05D006127 ORTHO05D007465 3.1e-49 200.7 254 45.7
Cfa002216 Carpinus fangiana HOM05D006127 ORTHO05D007465 2.9e-42 177.6 243 44.4
SEGI_03634 Sequoiadendron giganteum HOM05D006127 ORTHO05D007465 2.6e-35 154.5 120 60.0
SMO266G0103 Selaginella moellendorffii HOM05D006127 ORTHO05D007465 5.0e-31 140.2 196 36.2
AL8G39600 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.5e-30 138.7 99 70.7
TPR.G27774 Trifolium pratense HOM05D006127 ORTHO05D007465 4.4e-27 127.1 176 43.2
TPR.G9175 Trifolium pratense HOM05D006127 ORTHO05D007465 4.9e-26 123.6 80 72.5
COL.COLO4_36023 Corchorus olitorius HOM05D006127 ORTHO05D161883 1.5e-22 112.1 62 80.6
Ah.13g069250 Amaranthus hybridus HOM05D006127 ORTHO05D007465 6.4e-18 96.7 175 47.4
SEGI_25179 Sequoiadendron giganteum HOM05D006127 ORTHO05D007465 2.3e-15 88.2 80 53.8


User provided reference genes

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