Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021555 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 3.8e-48 194.5 97 100.0
CSS0008633 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 1.5e-36 156.0 97 85.6
CSS0001162 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 2.9e-32 141.7 72 95.8
CSS0009071 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 6.4e-32 140.6 72 94.4
Actinidia20374 Actinidia chinensis HOM05D005548 ORTHO05D007497 3.9e-29 131.3 83 79.5
Haze_25723 Corylus avellana HOM05D005548 ORTHO05D007497 1.9e-28 129.0 73 86.3
Haze_25730 Corylus avellana HOM05D005548 ORTHO05D007497 1.9e-28 129.0 73 86.3
GSVIVG01015386001 Vitis vinifera HOM05D005548 ORTHO05D007497 1.9e-28 129.0 73 86.3
PGR142G0895 Punica granatum HOM05D005548 ORTHO05D007497 3.3e-28 128.3 73 84.9
QL02p085206 Quercus lobata HOM05D005548 ORTHO05D007497 3.3e-28 128.3 73 86.3
Actinidia09420 Actinidia chinensis HOM05D005548 ORTHO05D007497 5.6e-28 127.5 83 78.3
Manes.03G021300 Manihot esculenta HOM05D005548 ORTHO05D007497 5.6e-28 127.5 73 84.9
TAR383G0243 Trochodendron aralioides HOM05D005548 ORTHO05D007497 5.6e-28 127.5 73 84.9
Cfa021563 Carpinus fangiana HOM05D005548 ORTHO05D007497 1.3e-27 126.3 73 83.6
Gohir.D07G005900 Gossypium hirsutum HOM05D005548 ORTHO05D007497 1.6e-27 125.9 83 74.7
Gohir.A07G006100 Gossypium hirsutum HOM05D005548 ORTHO05D007497 2.1e-27 125.6 73 83.6
Gorai.001G005500 Gossypium raimondii HOM05D005548 ORTHO05D007497 2.1e-27 125.6 73 83.6
Dinv36636 Davidia involucrata HOM05D005548 ORTHO05D007497 3.7e-27 124.8 73 87.7
Nn2g11732 Nelumbo nucifera HOM05D005548 ORTHO05D007497 3.7e-27 124.8 73 82.2
Sabra18G0068100 Salix brachista HOM05D005548 ORTHO05D007497 3.7e-27 124.8 83 75.9
ClCG00G004520 Citrullus lanatus HOM05D005548 ORTHO05D007497 4.8e-27 124.4 72 84.7
Eucgr.C01037 Eucalyptus grandis HOM05D005548 ORTHO05D007497 4.8e-27 124.4 73 82.2
Lj7C651T8 Lonicera japonica HOM05D005548 ORTHO05D007497 4.8e-27 124.4 73 83.6
VMungo0464G1126 Vigna mungo HOM05D005548 ORTHO05D007497 4.8e-27 124.4 73 82.2
Cc06_g09710 Coffea canephora HOM05D005548 ORTHO05D007497 6.2e-27 124.0 72 83.3
COL.COLO4_34874 Corchorus olitorius HOM05D005548 ORTHO05D007497 6.2e-27 124.0 72 83.3
MBI04_g22012_MAGBIO Magnolia biondii HOM05D005548 ORTHO05D007497 6.2e-27 124.0 72 84.7
Duzib168G0181 Durio zibethinus HOM05D005548 ORTHO05D007497 8.1e-27 123.6 92 68.5
Hma1.2p1_0518F.1_g171060 Hydrangea macrophylla HOM05D005548 ORTHO05D007497 8.1e-27 123.6 73 83.6
Hma1.2p1_0518F.1_g171070 Hydrangea macrophylla HOM05D005548 ORTHO05D007497 8.1e-27 123.6 73 83.6
Potri.018G080900 Populus trichocarpa HOM05D005548 ORTHO05D007497 8.1e-27 123.6 83 73.5
THA.LOC104811114 Tarenaya hassleriana HOM05D005548 ORTHO05D007497 8.1e-27 123.6 73 82.2
Cpa.g.sc23.102 Carica papaya HOM05D005548 ORTHO05D007497 1.1e-26 123.2 73 83.6
Atru.chr7.1357 Acer truncatum HOM05D005548 ORTHO05D007497 1.8e-26 122.5 72 84.7
Glyma.09G191000 Glycine max HOM05D005548 ORTHO05D007497 1.8e-26 122.5 73 80.8
Phvul.004G163700 Phaseolus vulgaris HOM05D005548 ORTHO05D007497 3.1e-26 121.7 73 79.5
CsaV3_1G024240 Cucumis sativus L. HOM05D005548 ORTHO05D007497 4.0e-26 121.3 72 80.6
MD15G1184300 Malus domestica HOM05D005548 ORTHO05D007497 4.0e-26 121.3 74 81.1
Sed0013441 Sechium edule HOM05D005548 ORTHO05D007497 4.0e-26 121.3 72 80.6
Sc18g0001240 Simmondsia chinensis HOM05D005548 ORTHO05D007497 5.3e-26 120.9 73 83.6
Thecc.09G109700 Theobroma cacao HOM05D005548 ORTHO05D007497 5.3e-26 120.9 73 82.2
EL10Ac8g18489 Beta vulgaris HOM05D005548 ORTHO05D007497 6.9e-26 120.6 73 79.5
Glyma.07G085900 Glycine max HOM05D005548 ORTHO05D007497 6.9e-26 120.6 73 79.5
Lj2g0015861 Lotus japonicus HOM05D005548 ORTHO05D007497 6.9e-26 120.6 73 79.5
Dinv41607 Davidia involucrata HOM05D005548 ORTHO05D007497 9.0e-26 120.2 73 82.2
TWI63G0439 Tripterygium wilfordii HOM05D005548 ORTHO05D007497 1.2e-25 119.8 73 80.8
MELO3C025346.2 Cucumis melo HOM05D005548 ORTHO05D007497 2.0e-25 119.0 72 81.9
CAN.G1529.9 Capsicum annuum HOM05D005548 ORTHO05D007497 3.4e-25 118.2 73 78.1
Nn8g39172 Nelumbo nucifera HOM05D005548 ORTHO05D007497 3.4e-25 118.2 72 80.6
CiPaw.04G163600 Carya illinoinensis HOM05D005548 ORTHO05D007497 4.5e-25 117.9 73 80.8
MD02G1046200 Malus domestica HOM05D005548 ORTHO05D007497 5.8e-25 117.5 74 79.7
SalBow1G6148 Salvia bowleyana HOM05D005548 ORTHO05D007497 5.8e-25 117.5 73 79.5
Prupe.7G231800 Prunus persica HOM05D005548 ORTHO05D007497 7.6e-25 117.1 74 78.4
DCAR_010452 Daucus carota HOM05D005548 ORTHO05D007497 9.9e-25 116.7 72 79.2
arahy.Tifrunner.gnm1.ann1.HQIA7A Arachis hypogaea HOM05D005548 ORTHO05D007497 1.3e-24 116.3 73 79.5
PGSC0003DMG400000312 Solanum tuberosum HOM05D005548 ORTHO05D007497 1.3e-24 116.3 73 76.7
MSTRG.26421 Avicennia marina HOM05D005548 ORTHO05D007497 1.7e-24 115.9 73 80.8
AUR62010987 Chenopodium quinoa HOM05D005548 ORTHO05D007497 1.7e-24 115.9 73 76.7
AUR62021496 Chenopodium quinoa HOM05D005548 ORTHO05D007497 1.7e-24 115.9 73 76.7
unitig_899.g15439 Utricularia gibba HOM05D005548 ORTHO05D007497 1.7e-24 115.9 73 76.7
Aa31LG4G18070 Aethionema arabicum HOM05D005548 ORTHO05D007497 2.2e-24 115.5 73 74.0
Migut.K00455 Erythranthe guttata HOM05D005548 ORTHO05D007497 2.2e-24 115.5 72 79.2
Nitab4.5_0002904g0080 Nicotiana tabacum HOM05D005548 ORTHO05D007497 2.2e-24 115.5 75 78.7
Nitab4.5_0005947g0010 Nicotiana tabacum HOM05D005548 ORTHO05D007497 2.2e-24 115.5 75 78.7
SalBow1G2309 Salvia bowleyana HOM05D005548 ORTHO05D007497 2.2e-24 115.5 73 79.5
Hund26198 Selenicereus undatus HOM05D005548 ORTHO05D007497 2.2e-24 115.5 73 78.1
Peaxi162Scf00546g00024 Petunia axillaris HOM05D005548 ORTHO05D007497 3.8e-24 114.8 101 61.4
ECA233G4048 Erigeron canadensis HOM05D005548 ORTHO05D007497 4.9e-24 114.4 73 76.7
Sopen12g003070 Solanum pennellii HOM05D005548 ORTHO05D007497 4.9e-24 114.4 72 76.4
CARHR193360 Cardamine hirsuta HOM05D005548 ORTHO05D007497 6.4e-24 114.0 73 75.3
SGA_v2.0_scaffold307G48040 Striga asiatica HOM05D005548 ORTHO05D007497 6.4e-24 114.0 87 66.7
ATR0315G003 Amborella trichopoda HOM05D005548 ORTHO05D007497 8.4e-24 113.6 76 77.6
FAN23G0305 Fragaria x ananassa HOM05D005548 ORTHO05D007497 8.4e-24 113.6 74 77.0
FAN26G0240 Fragaria x ananassa HOM05D005548 ORTHO05D007497 8.4e-24 113.6 74 77.0
FAN28G1005 Fragaria x ananassa HOM05D005548 ORTHO05D007497 8.4e-24 113.6 74 77.0
Solyc12g007090.2 Solanum lycopersicum HOM05D005548 ORTHO05D007497 1.1e-23 113.2 72 76.4
AT5G19540 Arabidopsis thaliana HOM05D005548 ORTHO05D007497 1.4e-23 112.8 72 76.4
Lsat_1_v5_gn_8_95001 Lactuca sativa HOM05D005548 ORTHO05D007497 1.4e-23 112.8 73 72.6
CDE02G3701 Ceratophyllum demersum HOM05D005548 ORTHO05D007497 1.9e-23 112.5 75 74.7
AL6G31050 Arabidopsis lyrata HOM05D005548 ORTHO05D007497 2.4e-23 112.1 72 75.0
Thhalv10013469m.g Eutrema salsugineum HOM05D005548 ORTHO05D007497 2.4e-23 112.1 72 76.4
FAN19G0123 Fragaria x ananassa HOM05D005548 ORTHO05D007497 2.4e-23 112.1 74 75.7
RcHm_v2.0_Chr2g0090331 Rosa chinensis HOM05D005548 ORTHO05D007497 2.4e-23 112.1 74 75.7
Sp6g24840 Schrenkiella parvula HOM05D005548 ORTHO05D007497 2.4e-23 112.1 72 76.4
BcaB05g23389 Brassica carinata HOM05D005548 ORTHO05D007497 4.2e-23 111.3 72 75.0
Carub.0006s1789 Capsella rubella HOM05D005548 ORTHO05D007497 4.2e-23 111.3 72 76.4
Lalb_Chr14g0371531 Lupinus albus HOM05D005548 ORTHO05D007497 4.2e-23 111.3 72 77.8
PSO832G1226 Papaver somniferum HOM05D005548 ORTHO05D007497 5.5e-23 110.9 73 76.7
Aqoxy7G01651 Aquilegia oxysepala HOM05D005548 ORTHO05D007497 7.1e-23 110.5 73 72.6
FvH4_1g04721 Fragaria vesca HOM05D005548 ORTHO05D007497 9.3e-23 110.2 74 74.3
BolC2t06964H Brassica oleracea HOM05D005548 ORTHO05D007497 1.2e-22 109.8 72 75.0
Lalb_Chr22g0352791 Lupinus albus HOM05D005548 ORTHO05D007497 1.2e-22 109.8 73 78.1
Duzib150G0071 Durio zibethinus HOM05D005548 ORTHO05D007497 1.6e-22 109.4 72 75.0
BcaC03g13685 Brassica carinata HOM05D005548 ORTHO05D007497 2.1e-22 109.0 72 73.6
BNapus_Darmor_BZH_scaffold_38p02320 Brassica napus HOM05D005548 ORTHO05D007497 2.1e-22 109.0 72 73.6
PSO782G1908 Papaver somniferum HOM05D005548 ORTHO05D007497 2.1e-22 109.0 73 75.3
Ca_03976_v3 Cicer arietinum L. HOM05D005548 ORTHO05D007497 2.7e-22 108.6 73 74.0
A02p05630 Brassica napus HOM05D005548 ORTHO05D007497 3.5e-22 108.2 72 73.6
BraA02t05515Z Brassica rapa HOM05D005548 ORTHO05D007497 3.5e-22 108.2 72 73.6
HanXRQChr06g0179971 Helianthus annuus HOM05D005548 ORTHO05D007497 1.0e-21 106.7 73 71.2
Medtr6g088460 Medicago truncatula HOM05D005548 ORTHO05D007497 2.3e-21 105.5 72 69.4
Rhsim01G0095300 Rhododendron simsii HOM05D005548 ORTHO05D007497 6.7e-21 104.0 73 68.5
Psat1g042920 Pisum sativum HOM05D005548 ORTHO05D007497 1.9e-20 102.4 72 70.8
TPR.G18453 Trifolium pratense HOM05D005548 ORTHO05D007497 7.4e-20 100.5 72 69.4
vmacro20704 Vaccinium macrocarpon HOM05D005548 ORTHO05D007497 2.1e-19 99.0 72 66.7
Os08g0387500 Oryza sativa ssp. japonica HOM05D005548 ORTHO05D007497 3.4e-17 91.7 72 65.3
HPP92_019989 Vanilla planifolia HOM05D005548 ORTHO05D004628 5.8e-17 90.9 73 56.2
Zm00001eb042080 Zea mays HOM05D005548 ORTHO05D007497 1.0e-16 90.1 72 63.9
SalBow1G1492 Salvia bowleyana HOM05D005548 ORTHO05D007497 7.9e-14 80.5 53 73.6
SEGI_11261 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 1.8e-13 79.3 55 63.6
SEGI_13755 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 1.8e-13 79.3 55 63.6
Pp3c17_15530 Physcomitrium patens HOM05D005548 ORTHO05D007497 6.7e-13 77.4 47 68.1
Pp3c17_15540 Physcomitrium patens HOM05D005548 ORTHO05D007497 6.7e-13 77.4 47 68.1
Mapoly0115s0052 Marchantia polymorpha HOM05D005548 ORTHO05D007497 3.3e-12 75.1 46 67.4
SMO367G0640 Selaginella moellendorffii HOM05D005548 ORTHO05D007497 1.6e-11 72.8 49 61.2
AagrBONN_evm.TU.Sc2ySwM_344.3922 Anthoceros agrestis HOM05D005548 ORTHO05D007497 1.5e-09 66.2 46 56.5
CBR_g3024 Chara braunii HOM05D005548 ORTHO05D007497 1.6e-06 56.2 48 54.2


User provided reference genes

Program Settings