Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021501 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 2.8e-100 368.6 189 100.0
CSS0024818 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 2.0e-98 362.5 189 98.4
Dinv42184 Davidia involucrata HOM05D000049 ORTHO05D008785 2.8e-39 166.0 131 69.5
Actinidia27967 Actinidia chinensis HOM05D000049 ORTHO05D008785 1.8e-38 163.3 131 70.2
Duzib132G0396 Durio zibethinus HOM05D000049 ORTHO05D008785 5.3e-38 161.8 131 67.2
Hma1.2p1_0796F.1_g219130 Hydrangea macrophylla HOM05D000049 ORTHO05D008785 3.8e-36 155.6 128 68.8
Duzib248G1051 Durio zibethinus HOM05D000049 ORTHO05D008785 8.4e-36 154.5 131 65.6
Thecc.02G106900 Theobroma cacao HOM05D000049 ORTHO05D008785 1.1e-35 154.1 131 64.9
Atru.chr5.2581 Acer truncatum HOM05D000049 ORTHO05D008785 1.4e-35 153.7 131 61.8
Ciclev10029534m.g Citrus clementina HOM05D000049 ORTHO05D008785 1.2e-34 150.6 131 65.6
CSS0023695 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 2.1e-34 149.8 131 67.2
GSVIVG01003167001 Vitis vinifera HOM05D000049 ORTHO05D008785 2.1e-34 149.8 133 64.7
Potri.009G096800 Populus trichocarpa HOM05D000049 ORTHO05D008785 2.7e-34 149.4 130 63.8
Cc02_g19180 Coffea canephora HOM05D000049 ORTHO05D008785 7.8e-34 147.9 131 61.8
Nn1g04714 Nelumbo nucifera HOM05D000049 ORTHO05D008785 1.3e-33 147.1 108 70.4
Prupe.8G134100 Prunus persica HOM05D000049 ORTHO05D008785 3.9e-33 145.6 131 65.6
Cpa.g.sc106.84 Carica papaya HOM05D000049 ORTHO05D008785 1.5e-32 143.7 133 64.7
QL11p033983 Quercus lobata HOM05D000049 ORTHO05D008785 1.5e-32 143.7 131 61.8
Atru.chr11.1081 Acer truncatum HOM05D000049 ORTHO05D008785 2.5e-32 142.9 131 61.1
Haze_10161 Corylus avellana HOM05D000049 ORTHO05D008785 4.3e-32 142.1 131 61.8
Sabra16G0189300 Salix brachista HOM05D000049 ORTHO05D008785 4.3e-32 142.1 131 61.1
FAN24G0707 Fragaria x ananassa HOM05D000049 ORTHO05D008785 9.6e-32 141.0 131 63.4
TWI31G0015 Tripterygium wilfordii HOM05D000049 ORTHO05D008785 9.6e-32 141.0 131 61.8
FvH4_2g05321 Fragaria vesca HOM05D000049 ORTHO05D008785 1.3e-31 140.6 131 63.4
Manes.02G137400 Manihot esculenta HOM05D000049 ORTHO05D008785 1.6e-31 140.2 131 62.6
Hund06332 Selenicereus undatus HOM05D000049 ORTHO05D008785 2.8e-31 139.4 131 59.5
FAN20G0640 Fragaria x ananassa HOM05D000049 ORTHO05D008785 4.8e-31 138.7 131 62.6
Aqoxy5G01153 Aquilegia oxysepala HOM05D000049 ORTHO05D008785 6.2e-31 138.3 107 68.2
Cfa004569 Carpinus fangiana HOM05D000049 ORTHO05D008785 6.2e-31 138.3 131 60.3
VMungo0720G1000 Vigna mungo HOM05D000049 ORTHO05D008785 6.2e-31 138.3 131 59.5
Phvul.007G038900 Phaseolus vulgaris HOM05D000049 ORTHO05D008785 8.1e-31 137.9 131 59.5
Potri.001G301100 Populus trichocarpa HOM05D000049 ORTHO05D008785 8.1e-31 137.9 130 60.0
RcHm_v2.0_Chr6g0255531 Rosa chinensis HOM05D000049 ORTHO05D008785 8.1e-31 137.9 131 63.4
FAN15G1433 Fragaria x ananassa HOM05D000049 ORTHO05D008785 2.4e-30 136.3 131 61.1
Lj5g0006015 Lotus japonicus HOM05D000049 ORTHO05D008785 2.4e-30 136.3 132 59.1
MD05G1088100 Malus domestica HOM05D000049 ORTHO05D008785 2.4e-30 136.3 131 61.8
Eucgr.H03224 Eucalyptus grandis HOM05D000049 ORTHO05D008785 4.0e-30 135.6 132 60.6
Gohir.D02G207500 Gossypium hirsutum HOM05D000049 ORTHO05D008785 4.0e-30 135.6 133 57.9
Sc08g0001450 Simmondsia chinensis HOM05D000049 ORTHO05D008785 4.0e-30 135.6 131 58.8
Gohir.A03G186700 Gossypium hirsutum HOM05D000049 ORTHO05D008785 5.3e-30 135.2 133 57.1
vmacro19520 Vaccinium macrocarpon HOM05D000049 ORTHO05D008785 5.3e-30 135.2 116 65.5
Dinv15757 Davidia involucrata HOM05D000049 ORTHO05D008785 6.9e-30 134.8 119 61.3
CiPaw.06G170000 Carya illinoinensis HOM05D000049 ORTHO05D008785 9.0e-30 134.4 129 62.0
CANSAT25G0973 Cannabis sativa HOM05D000049 ORTHO05D008785 1.5e-29 133.7 131 60.3
EL10Ac9g22295 Beta vulgaris HOM05D000049 ORTHO05D008785 2.0e-29 133.3 131 57.3
AUR62010281 Chenopodium quinoa HOM05D000049 ORTHO05D008785 2.0e-29 133.3 131 56.5
AUR62039109 Chenopodium quinoa HOM05D000049 ORTHO05D008785 2.0e-29 133.3 131 56.5
Gorai.005G235400 Gossypium raimondii HOM05D000049 ORTHO05D008785 2.0e-29 133.3 133 57.1
TAR381G1170 Trochodendron aralioides HOM05D000049 ORTHO05D008785 2.0e-29 133.3 131 56.5
CANSAT25G0620 Cannabis sativa HOM05D000049 ORTHO05D008785 3.4e-29 132.5 131 59.5
Medtr1g107490 Medicago truncatula HOM05D000049 ORTHO05D008785 4.5e-29 132.1 132 58.3
Glyma.10G263000 Glycine max HOM05D000049 ORTHO05D008785 5.8e-29 131.7 131 60.3
Psat6g219680 Pisum sativum HOM05D000049 ORTHO05D008785 5.8e-29 131.7 131 57.3
CsaV3_7G008250 Cucumis sativus L. HOM05D000049 ORTHO05D008785 9.9e-29 131.0 131 57.3
Nitab4.5_0002815g0100 Nicotiana tabacum HOM05D000049 ORTHO05D008785 3.8e-28 129.0 132 59.8
Solyc01g107660.3 Solanum lycopersicum HOM05D000049 ORTHO05D008785 3.8e-28 129.0 132 57.6
Lalb_Chr02g0145351 Lupinus albus HOM05D000049 ORTHO05D008785 4.9e-28 128.6 131 54.2
ClCG02G006290 Citrullus lanatus HOM05D000049 ORTHO05D008785 8.4e-28 127.9 133 60.9
Oeu010393.1 Olea europaea HOM05D000049 ORTHO05D008785 8.4e-28 127.9 133 60.9
HanXRQChr03g0070281 Helianthus annuus HOM05D000049 ORTHO05D008785 1.1e-27 127.5 109 64.2
AT4G34190 Arabidopsis thaliana HOM05D000049 ORTHO05D008785 2.4e-27 126.3 131 56.5
ECA240G2980 Erigeron canadensis HOM05D000049 ORTHO05D000027 3.2e-27 125.9 131 55.7
Glyma.20G127500 Glycine max HOM05D000049 ORTHO05D008785 4.2e-27 125.6 131 58.8
SalBow3G3686 Salvia bowleyana HOM05D000049 ORTHO05D008785 4.2e-27 125.6 135 60.7
PGSC0003DMG400025866 Solanum tuberosum HOM05D000049 ORTHO05D008785 4.2e-27 125.6 132 57.6
TPR.G13867 Trifolium pratense HOM05D000049 ORTHO05D008785 4.2e-27 125.6 131 57.3
CAN.G1231.12 Capsicum annuum HOM05D000049 ORTHO05D008785 7.1e-27 124.8 132 59.1
PGR042G1228 Punica granatum HOM05D000049 ORTHO05D008785 1.2e-26 124.0 134 59.0
Ah.01g018130 Amaranthus hybridus HOM05D000049 ORTHO05D008785 2.1e-26 123.2 135 54.8
CDE02G2484 Ceratophyllum demersum HOM05D000049 ORTHO05D008785 3.5e-26 122.5 131 56.5
Migut.N01171 Erythranthe guttata HOM05D000049 ORTHO05D008785 3.5e-26 122.5 133 57.9
Sabra09G0074400 Salix brachista HOM05D000049 ORTHO05D008785 3.5e-26 122.5 133 54.1
SGA_v2.0_scaffold393G50708 Striga asiatica HOM05D000049 ORTHO05D008785 1.3e-25 120.6 88 73.9
CARHR242610 Cardamine hirsuta HOM05D000049 ORTHO05D008785 1.8e-25 120.2 133 56.4
Migut.B00381 Erythranthe guttata HOM05D000049 ORTHO05D008785 1.8e-25 120.2 125 54.4
Oeu018599.1 Olea europaea HOM05D000049 ORTHO05D008785 3.9e-25 119.0 72 86.1
Peaxi162Scf00016g02238 Petunia axillaris HOM05D000049 ORTHO05D008785 5.1e-25 118.6 132 56.8
Aa31LG2G16660 Aethionema arabicum HOM05D000049 ORTHO05D008785 6.7e-25 118.2 133 56.4
Carub.0007s0619 Capsella rubella HOM05D000049 ORTHO05D008785 6.7e-25 118.2 133 53.4
PSO210G6109 Papaver somniferum HOM05D000049 ORTHO05D008785 6.7e-25 118.2 108 57.4
Sed0018040 Sechium edule HOM05D000049 ORTHO05D008785 6.7e-25 118.2 131 57.3
AL7G17120 Arabidopsis lyrata HOM05D000049 ORTHO05D008785 8.7e-25 117.9 132 55.3
THA.LOC104819560 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 8.7e-25 117.9 133 56.4
MSTRG.5347 Avicennia marina HOM05D000049 ORTHO05D008785 1.9e-24 116.7 135 56.3
BcaNung03801 Brassica carinata HOM05D000049 ORTHO05D008785 1.9e-24 116.7 135 57.0
Glyma.20G129600 Glycine max HOM05D000049 ORTHO05D008785 1.9e-24 116.7 100 65.0
A01p04250 Brassica napus HOM05D000049 ORTHO05D008785 2.5e-24 116.3 135 56.3
BraA01t00414Z Brassica rapa HOM05D000049 ORTHO05D008785 2.5e-24 116.3 135 56.3
C01p04640 Brassica napus HOM05D000049 ORTHO05D008785 3.3e-24 115.9 135 56.3
BolC1t00447H Brassica oleracea HOM05D000049 ORTHO05D008785 3.3e-24 115.9 135 56.3
Nitab4.5_0005392g0020 Nicotiana tabacum HOM05D000049 ORTHO05D008785 3.3e-24 115.9 131 55.7
CiPaw.05G010600 Carya illinoinensis HOM05D000049 ORTHO05D008785 5.6e-24 115.2 80 76.2
TAR376G0829 Trochodendron aralioides HOM05D000049 ORTHO05D008785 1.6e-23 113.6 99 61.6
PSO170G1282 Papaver somniferum HOM05D000049 ORTHO05D008785 2.1e-23 113.2 113 55.8
Thhalv10026482m.g Eutrema salsugineum HOM05D000049 ORTHO05D008785 1.1e-22 110.9 137 51.1
arahy.Tifrunner.gnm1.ann1.KJA62A Arachis hypogaea HOM05D000049 ORTHO05D008785 2.4e-22 109.8 154 46.1
Sp7g31960 Schrenkiella parvula HOM05D000049 ORTHO05D008785 2.4e-22 109.8 134 53.0
unitig_22.g6845 Utricularia gibba HOM05D000049 ORTHO05D008785 2.4e-22 109.8 83 69.9
DCAR_030806 Daucus carota HOM05D000049 ORTHO05D008785 9.0e-22 107.8 79 69.6
MELO3C018482.2 Cucumis melo HOM05D000049 ORTHO05D000027 3.4e-21 105.9 79 72.2
Hund00143 Selenicereus undatus HOM05D000049 ORTHO05D008785 3.8e-20 102.4 94 62.8
arahy.Tifrunner.gnm1.ann1.MU25MQ Arachis hypogaea HOM05D000049 ORTHO05D008785 8.4e-20 101.3 76 68.4
HPP92_004768 Vanilla planifolia HOM05D000049 ORTHO05D008785 1.4e-19 100.5 90 60.0
THA.LOC104807247 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 4.2e-19 99.0 136 47.1
FAN27G0752 Fragaria x ananassa HOM05D000049 ORTHO05D000027 1.6e-18 97.1 113 54.9
SEGI_21574 Sequoiadendron giganteum HOM05D000049 ORTHO05D008785 1.8e-17 93.6 142 42.3
TAR628G1275 Trochodendron aralioides HOM05D000049 ORTHO05D008785 1.1e-14 84.3 78 57.7
Zm00001eb048670 Zea mays HOM05D000049 ORTHO05D008785 6.5e-12 75.1 62 56.5
Mapoly0006s0145 Marchantia polymorpha HOM05D000049 ORTHO05D008785 8.4e-12 74.7 102 43.1
Os11g0621400 Oryza sativa ssp. japonica HOM05D000049 ORTHO05D008785 1.4e-11 73.9 87 43.7
Pp3c1_21810 Physcomitrium patens HOM05D000049 ORTHO05D008785 1.6e-10 70.5 85 44.7
ATR0691G295 Amborella trichopoda HOM05D000049 ORTHO05D008785 1.9e-08 63.5 40 77.5
AagrBONN_evm.TU.Sc2ySwM_117.2783 Anthoceros agrestis HOM05D000049 ORTHO05D008785 2.5e-08 63.2 66 47.0
SMO340G0196 Selaginella moellendorffii HOM05D000049 ORTHO05D008785 7.4e-08 61.6 64 50.0
COL.COLO4_15744 Corchorus olitorius HOM05D001416 ORTHO05D002549 6.3e-07 58.5 34 79.4


User provided reference genes

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