Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021462 Camellia sinensis var. sinensis HOM05D005256 ORTHO05D006491 1.4e-86 323.2 200 100.0
Rhsim13G0136300 Rhododendron simsii HOM05D005256 ORTHO05D006491 4.7e-69 265.0 204 77.9
CSS0003949 Camellia sinensis var. sinensis HOM05D005256 ORTHO05D006491 9.7e-59 230.7 134 87.3
Dinv07938 Davidia involucrata HOM05D005256 ORTHO05D006491 1.2e-56 223.8 210 75.7
Dinv18415 Davidia involucrata HOM05D005256 ORTHO05D006491 1.2e-56 223.8 210 75.7
vmacro03574 Vaccinium macrocarpon HOM05D005256 ORTHO05D006491 4.5e-56 221.9 139 82.7
Sabra03G0114000 Salix brachista HOM05D005256 ORTHO05D006491 2.9e-55 219.2 201 69.7
Eucgr.D00001 Eucalyptus grandis HOM05D005256 ORTHO05D006491 6.5e-55 218.0 145 80.0
CiPaw.09G140800 Carya illinoinensis HOM05D005256 ORTHO05D006491 8.5e-55 217.6 139 79.1
Solyc10g005100.3 Solanum lycopersicum HOM05D005256 ORTHO05D006491 1.5e-54 216.9 141 78.0
Nn1g09867 Nelumbo nucifera HOM05D005256 ORTHO05D006491 1.9e-54 216.5 138 81.2
Oeu005126.1 Olea europaea HOM05D005256 ORTHO05D006491 3.2e-54 215.7 199 60.8
Peaxi162Scf00888g00114 Petunia axillaris HOM05D005256 ORTHO05D006491 3.2e-54 215.7 134 80.6
Haze_05185 Corylus avellana HOM05D005256 ORTHO05D006491 7.2e-54 214.5 200 69.0
Sabra01G0052200 Salix brachista HOM05D005256 ORTHO05D006491 1.2e-53 213.8 141 78.0
TAR624G1249 Trochodendron aralioides HOM05D005256 ORTHO05D006491 1.2e-53 213.8 143 76.9
Atru.chr10.203 Acer truncatum HOM05D005256 ORTHO05D006491 2.1e-53 213.0 214 60.7
Oeu052922.1 Olea europaea HOM05D005256 ORTHO05D006491 2.1e-53 213.0 208 60.6
EL10Ac7g17298 Beta vulgaris HOM05D005256 ORTHO05D006491 2.7e-53 212.6 191 62.8
Sopen10g001120 Solanum pennellii HOM05D005256 ORTHO05D006491 4.7e-53 211.8 201 60.7
CAN.G465.5 Capsicum annuum HOM05D005256 ORTHO05D006491 6.1e-53 211.5 135 80.0
Hma1.2p1_0082F.1_g042560 Hydrangea macrophylla HOM05D005256 ORTHO05D006491 6.1e-53 211.5 146 76.7
QL11p010746 Quercus lobata HOM05D005256 ORTHO05D006491 8.0e-53 211.1 209 66.5
Potri.003G157100 Populus trichocarpa HOM05D005256 ORTHO05D006491 1.4e-52 210.3 212 68.9
PGSC0003DMG400011293 Solanum tuberosum HOM05D005256 ORTHO05D006491 3.0e-52 209.1 142 76.1
arahy.Tifrunner.gnm1.ann1.QDE700 Arachis hypogaea HOM05D005256 ORTHO05D006491 5.2e-52 208.4 140 76.4
arahy.Tifrunner.gnm1.ann1.98CSRD Arachis hypogaea HOM05D005256 ORTHO05D006491 8.8e-52 207.6 136 78.7
Lj6g0014214 Lotus japonicus HOM05D005256 ORTHO05D006491 8.8e-52 207.6 143 76.2
Potri.001G073900 Populus trichocarpa HOM05D005256 ORTHO05D006491 8.8e-52 207.6 202 64.4
Lsat_1_v5_gn_2_59820 Lactuca sativa HOM05D005256 ORTHO05D006491 1.2e-51 207.2 135 78.5
Nitab4.5_0004778g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 1.2e-51 207.2 141 74.5
TAR626G1126 Trochodendron aralioides HOM05D005256 ORTHO05D006491 1.2e-51 207.2 132 80.3
Glyma.09G047200 Glycine max HOM05D005256 ORTHO05D006491 2.0e-51 206.5 140 77.9
Glyma.15G154700 Glycine max HOM05D005256 ORTHO05D006491 2.6e-51 206.1 140 77.9
GSVIVG01001340001 Vitis vinifera HOM05D005256 ORTHO05D006491 2.2e-50 203.0 134 79.1
Ciclev10016618m.g Citrus clementina HOM05D005256 ORTHO05D006491 2.8e-50 202.6 141 75.9
TWI63G0333 Tripterygium wilfordii HOM05D005256 ORTHO05D006491 3.7e-50 202.2 203 62.6
MBI07_g44405_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 6.3e-50 201.4 143 72.7
Manes.16G060225 Manihot esculenta HOM05D005256 ORTHO05D006491 1.4e-49 200.3 133 76.7
AUR62040985 Chenopodium quinoa HOM05D005256 ORTHO05D006491 4.1e-49 198.7 207 60.9
Lalb_Chr18g0051841 Lupinus albus HOM05D005256 ORTHO05D006491 4.1e-49 198.7 144 76.4
MSTRG.14820 Avicennia marina HOM05D005256 ORTHO05D006491 5.4e-49 198.4 144 73.6
Hund20133 Selenicereus undatus HOM05D005256 ORTHO05D006491 9.1e-49 197.6 142 70.4
Lalb_Chr15g0083621 Lupinus albus HOM05D005256 ORTHO05D006491 1.2e-48 197.2 141 75.2
MD10G1224100 Malus domestica HOM05D005256 ORTHO05D006491 1.2e-48 197.2 141 75.2
MD05G1242300 Malus domestica HOM05D005256 ORTHO05D006491 2.0e-48 196.4 147 72.1
Ah.15g091820 Amaranthus hybridus HOM05D005256 ORTHO05D006491 2.7e-48 196.1 143 73.4
Prupe.4G121100 Prunus persica HOM05D005256 ORTHO05D006491 5.9e-48 194.9 135 75.6
COL.COLO4_25022 Corchorus olitorius HOM05D005256 ORTHO05D006491 7.7e-48 194.5 133 75.9
Phvul.009G245700 Phaseolus vulgaris HOM05D005256 ORTHO05D006491 1.0e-47 194.1 136 75.0
ECA238G2220 Erigeron canadensis HOM05D005256 ORTHO05D006491 1.3e-47 193.7 132 77.3
HanXRQChr14g0439031 Helianthus annuus HOM05D005256 ORTHO05D006491 3.8e-47 192.2 135 73.3
TPR.G31382 Trifolium pratense HOM05D005256 ORTHO05D006491 5.0e-47 191.8 143 69.9
RcHm_v2.0_Chr5g0022081 Rosa chinensis HOM05D005256 ORTHO05D006491 2.5e-46 189.5 140 71.4
Sc17g0004300 Simmondsia chinensis HOM05D005256 ORTHO05D006491 2.5e-46 189.5 202 63.4
FvH4_3g13370 Fragaria vesca HOM05D005256 ORTHO05D006491 4.2e-46 188.7 144 69.4
Psat1g152160 Pisum sativum HOM05D005256 ORTHO05D006491 4.2e-46 188.7 138 72.5
Migut.L00006 Erythranthe guttata HOM05D005256 ORTHO05D006491 5.5e-46 188.3 131 72.5
Cpa.g.sc30.65 Carica papaya HOM05D005256 ORTHO05D006491 7.2e-46 188.0 136 70.6
FAN25G1093 Fragaria x ananassa HOM05D005256 ORTHO05D006491 9.5e-46 187.6 144 69.4
HanXRQChr15g0487481 Helianthus annuus HOM05D005256 ORTHO05D006491 9.5e-46 187.6 131 73.3
Aa31LG6G2690 Aethionema arabicum HOM05D005256 ORTHO05D006491 1.6e-45 186.8 140 65.7
SalBow7G1744 Salvia bowleyana HOM05D005256 ORTHO05D006491 6.1e-45 184.9 131 71.0
Medtr2g437530 Medicago truncatula HOM05D005256 ORTHO05D006491 1.4e-44 183.7 199 55.3
Ca_02405_v3 Cicer arietinum L. HOM05D005256 ORTHO05D006491 1.8e-44 183.3 146 68.5
AT4G20260 Arabidopsis thaliana HOM05D005256 ORTHO05D006491 2.3e-44 183.0 142 67.6
Peaxi162Scf01310g00311 Petunia axillaris HOM05D005256 ORTHO05D006491 2.3e-44 183.0 135 69.6
CiPaw.10G108500 Carya illinoinensis HOM05D005256 ORTHO05D006491 3.0e-44 182.6 202 62.9
FAN11G1371 Fragaria x ananassa HOM05D005256 ORTHO05D006491 3.0e-44 182.6 215 64.2
Thhalv10026094m.g Eutrema salsugineum HOM05D005256 ORTHO05D006491 4.0e-44 182.2 144 65.3
CARHR227090 Cardamine hirsuta HOM05D005256 ORTHO05D006491 5.2e-44 181.8 142 66.9
FAN21G0853 Fragaria x ananassa HOM05D005256 ORTHO05D006491 5.2e-44 181.8 214 60.7
Lsat_1_v5_gn_8_107621 Lactuca sativa HOM05D005256 ORTHO05D006491 5.2e-44 181.8 198 66.2
CANSAT35G0328 Cannabis sativa HOM05D005256 ORTHO05D006491 1.2e-43 180.6 138 68.8
FAN16G0515 Fragaria x ananassa HOM05D005256 ORTHO05D006491 1.2e-43 180.6 215 63.3
AL7G33640 Arabidopsis lyrata HOM05D005256 ORTHO05D006491 1.5e-43 180.3 142 66.2
VMungo1309G1298 Vigna mungo HOM05D005256 ORTHO05D006491 1.5e-43 180.3 134 73.1
ATR0737G015 Amborella trichopoda HOM05D005256 ORTHO05D006491 3.4e-43 179.1 151 66.9
Cc09_g04590 Coffea canephora HOM05D005256 ORTHO05D006491 3.4e-43 179.1 132 70.5
THA.LOC104811953 Tarenaya hassleriana HOM05D005256 ORTHO05D006491 3.4e-43 179.1 142 66.2
Carub.0007s2091 Capsella rubella HOM05D005256 ORTHO05D006491 4.4e-43 178.7 147 63.9
THA.LOC104812925 Tarenaya hassleriana HOM05D005256 ORTHO05D006491 9.8e-43 177.6 142 66.2
BcaC09g51326 Brassica carinata HOM05D005256 ORTHO05D006491 1.7e-42 176.8 142 64.8
A01p11960 Brassica napus HOM05D005256 ORTHO05D006491 1.7e-42 176.8 142 64.8
C01p14230 Brassica napus HOM05D005256 ORTHO05D006491 1.7e-42 176.8 142 64.8
BolC1t01388H Brassica oleracea HOM05D005256 ORTHO05D006491 1.7e-42 176.8 142 64.8
BraA01t01138Z Brassica rapa HOM05D005256 ORTHO05D006491 1.7e-42 176.8 142 64.8
Thecc.02G000700 Theobroma cacao HOM05D005256 ORTHO05D006491 2.2e-42 176.4 126 71.4
PSO541G2657 Papaver somniferum HOM05D005256 ORTHO05D006491 2.8e-42 176.0 137 67.9
PSO675G8904 Papaver somniferum HOM05D005256 ORTHO05D006491 2.8e-42 176.0 137 67.9
FAN25G0981 Fragaria x ananassa HOM05D005256 ORTHO05D006491 4.9e-42 175.3 144 67.4
ECA232G1901 Erigeron canadensis HOM05D005256 ORTHO05D006491 8.3e-42 174.5 206 64.6
BraA03t14315Z Brassica rapa HOM05D005256 ORTHO05D006491 1.4e-41 173.7 142 62.7
C07p50830 Brassica napus HOM05D005256 ORTHO05D006491 1.8e-41 173.3 142 62.7
BolC7t45581H Brassica oleracea HOM05D005256 ORTHO05D006491 1.8e-41 173.3 142 62.7
BcaNung03497 Brassica carinata HOM05D005256 ORTHO05D006491 2.4e-41 172.9 142 62.7
A03p52380 Brassica napus HOM05D005256 ORTHO05D006491 4.1e-41 172.2 142 62.0
CDE10G0480 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 4.1e-41 172.2 135 65.2
MBI06_g04184_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 4.1e-41 172.2 138 66.7
Sp7g18620 Schrenkiella parvula HOM05D005256 ORTHO05D006491 4.1e-41 172.2 142 63.4
BcaC06g30648 Brassica carinata HOM05D005256 ORTHO05D006491 1.6e-40 170.2 142 61.3
CDE10G1097 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 5.9e-40 168.3 137 63.5
CDE02G1470 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 7.8e-40 167.9 135 64.4
Nitab4.5_0000217g0040 Nicotiana tabacum HOM05D005256 ORTHO05D006491 7.8e-40 167.9 198 60.6
AUR62042105 Chenopodium quinoa HOM05D005256 ORTHO05D006491 1.7e-39 166.8 198 54.5
HPP92_008810 Vanilla planifolia HOM05D005256 ORTHO05D006491 7.3e-38 161.4 130 67.7
BcaNung03716 Brassica carinata HOM05D005256 ORTHO05D006491 1.2e-37 160.6 138 63.0
HanXRQChr09g0257711 Helianthus annuus HOM05D005256 ORTHO05D006491 6.1e-37 158.3 131 63.4
Aa31LG9G8540 Aethionema arabicum HOM05D005256 ORTHO05D006491 1.2e-35 154.1 138 60.9
Os02g0285300 Oryza sativa ssp. japonica HOM05D005256 ORTHO05D006491 3.4e-35 152.5 145 57.2
A09p21180 Brassica napus HOM05D005256 ORTHO05D006491 9.8e-35 151.0 140 57.1
BraA09t37724Z Brassica rapa HOM05D005256 ORTHO05D006491 9.8e-35 151.0 140 57.1
Nitab4.5_0001253g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 1.3e-34 150.6 135 63.0
BcaB07g30940 Brassica carinata HOM05D005256 ORTHO05D006491 6.4e-34 148.3 140 56.4
BcaC04g21824 Brassica carinata HOM05D005256 ORTHO05D006491 6.4e-34 148.3 140 55.7
C07p27480 Brassica napus HOM05D005256 ORTHO05D006491 6.4e-34 148.3 132 61.4
C09p27010 Brassica napus HOM05D005256 ORTHO05D006491 6.4e-34 148.3 140 55.7
BolC9t55584H Brassica oleracea HOM05D005256 ORTHO05D006491 6.4e-34 148.3 140 55.7
BcaC06g34533 Brassica carinata HOM05D005256 ORTHO05D006491 1.4e-33 147.1 155 55.5
A06p47070 Brassica napus HOM05D005256 ORTHO05D006491 2.4e-33 146.4 136 59.6
BraA06t27579Z Brassica rapa HOM05D005256 ORTHO05D006491 2.4e-33 146.4 136 59.6
BolC7t43278H Brassica oleracea HOM05D005256 ORTHO05D006491 3.2e-33 146.0 132 60.6
Nitab4.5_0012748g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 3.2e-33 146.0 103 73.8
BcaB07g30517 Brassica carinata HOM05D005256 ORTHO05D006491 1.2e-32 144.1 141 58.2
DCAR_003732 Daucus carota HOM05D005256 ORTHO05D006491 1.2e-32 144.1 131 58.0
CDE09G1225 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 6.0e-32 141.7 200 53.0
Sp2g09430 Schrenkiella parvula HOM05D005256 ORTHO05D006491 4.3e-30 135.6 136 55.1
Os01g0233000 Oryza sativa ssp. japonica HOM05D005256 ORTHO05D006491 2.6e-27 126.3 142 52.8
Zm00001eb119130 Zea mays HOM05D005256 ORTHO05D006491 4.9e-26 122.1 132 56.1
C02p45090 Brassica napus HOM05D005256 ORTHO05D006491 9.2e-25 117.9 141 52.5
BolC2t10548H Brassica oleracea HOM05D005256 ORTHO05D006491 9.2e-25 117.9 141 52.5
MBI06_g26562_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 2.0e-24 116.7 98 64.3
Zm00001eb236850 Zea mays HOM05D005256 ORTHO05D006491 3.5e-24 115.9 114 58.8
Zm00001eb339340 Zea mays HOM05D005256 ORTHO05D006491 4.6e-24 115.5 189 44.4
Lsat_1_v5_gn_9_9820 Lactuca sativa HOM05D005256 ORTHO05D006491 4.3e-22 109.0 100 63.0
Lalb_Chr20g0114421 Lupinus albus HOM05D005256 ORTHO05D006491 8.1e-21 104.8 78 69.2
SGA_v2.0_scaffold51G18675 Striga asiatica HOM05D003701 ORTHO05D004771 2.0e-19 100.1 67 77.6
Zm00001eb381370 Zea mays HOM05D005256 ORTHO05D006491 1.6e-08 63.9 60 61.7
Mapoly0087s0006 Marchantia polymorpha HOM05D005256 ORTHO05D006491 3.5e-08 62.8 141 34.8


User provided reference genes

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