Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021447 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 8.6e-188 660.2 347 100.0
CSS0002219 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 5.8e-184 647.5 348 98.3
Rhsim04G0169300 Rhododendron simsii HOM05D006361 ORTHO05D007824 4.7e-125 451.8 327 73.4
Hma1.2p1_0068F.1_g037170 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 2.0e-120 436.4 348 67.8
GSVIVG01000604001 Vitis vinifera HOM05D006361 ORTHO05D007824 5.0e-119 431.8 332 68.4
TAR371G0655 Trochodendron aralioides HOM05D006361 ORTHO05D007824 1.7e-114 416.8 347 65.4
Lj6A727G89 Lonicera japonica HOM05D006361 ORTHO05D007824 1.2e-112 410.6 343 66.2
Dinv06050 Davidia involucrata HOM05D006361 ORTHO05D007824 1.7e-111 406.8 339 66.1
TWI74G1113 Tripterygium wilfordii HOM05D006361 ORTHO05D007824 6.1e-109 398.3 343 63.8
Duzib251G0777 Durio zibethinus HOM05D006361 ORTHO05D007824 8.0e-109 397.9 337 62.6
Gohir.D02G138700 Gossypium hirsutum HOM05D006361 ORTHO05D007824 4.4e-107 392.1 339 62.5
Potri.010G099500 Populus trichocarpa HOM05D006361 ORTHO05D007824 4.4e-107 392.1 342 61.4
Gorai.005G155100 Gossypium raimondii HOM05D006361 ORTHO05D007824 5.7e-107 391.7 339 62.2
Cpa.g.sc2.83 Carica papaya HOM05D006361 ORTHO05D007824 1.3e-106 390.6 342 63.2
Thecc.02G299900 Theobroma cacao HOM05D006361 ORTHO05D007824 6.3e-106 388.3 342 61.7
CiPaw.05G161000 Carya illinoinensis HOM05D006361 ORTHO05D007824 8.3e-106 387.9 340 62.6
Nn4g24771 Nelumbo nucifera HOM05D006361 ORTHO05D007824 2.4e-105 386.3 332 63.3
QL03p040836 Quercus lobata HOM05D006361 ORTHO05D007824 1.6e-104 383.6 340 61.8
Cfa015091 Carpinus fangiana HOM05D006361 ORTHO05D007824 2.0e-104 383.3 333 60.7
Gohir.A03G114200 Gossypium hirsutum HOM05D006361 ORTHO05D007824 5.9e-104 381.7 340 61.5
Ciclev10005401m.g Citrus clementina HOM05D006361 ORTHO05D007824 1.9e-102 376.7 333 62.2
DCAR_030322 Daucus carota HOM05D006361 ORTHO05D007824 4.7e-101 372.1 345 60.3
Eucgr.G02045 Eucalyptus grandis HOM05D006361 ORTHO05D007824 1.7e-98 363.6 334 58.7
Manes.15G141000 Manihot esculenta HOM05D006361 ORTHO05D007824 3.7e-98 362.5 338 59.5
Sabra10G0072200 Salix brachista HOM05D006361 ORTHO05D007824 1.1e-97 360.9 364 55.8
arahy.Tifrunner.gnm1.ann1.DP1KMD Arachis hypogaea HOM05D006361 ORTHO05D007824 1.8e-97 360.1 326 60.1
HanXRQChr08g0224371 Helianthus annuus HOM05D006361 ORTHO05D007824 1.8e-97 360.1 324 60.8
Prupe.1G340600 Prunus persica HOM05D006361 ORTHO05D007824 1.8e-97 360.1 343 60.9
Aqoxy3G04165 Aquilegia oxysepala HOM05D006361 ORTHO05D007824 7.0e-97 358.2 320 58.4
Cc11_g04970 Coffea canephora HOM05D006361 ORTHO05D007824 7.0e-97 358.2 332 59.9
PGR142G2205 Punica granatum HOM05D006361 ORTHO05D007824 1.6e-96 357.1 330 60.0
arahy.Tifrunner.gnm1.ann1.L5ZJMR Arachis hypogaea HOM05D006361 ORTHO05D007824 4.5e-96 355.5 326 59.5
Sed0017139 Sechium edule HOM05D006361 ORTHO05D007824 1.7e-95 353.6 332 61.1
ClCG11G000690 Citrullus lanatus HOM05D006361 ORTHO05D007824 3.9e-95 352.4 333 59.8
FAN12G2025 Fragaria x ananassa HOM05D006361 ORTHO05D007824 1.9e-94 350.1 329 60.5
PGSC0003DMG400030230 Solanum tuberosum HOM05D006361 ORTHO05D007824 4.3e-94 349.0 345 58.3
Sopen01g014340 Solanum pennellii HOM05D006361 ORTHO05D007824 1.2e-93 347.4 345 58.0
Oeu005683.1 Olea europaea HOM05D006361 ORTHO05D007824 2.1e-93 346.7 327 57.8
Lj5g0003295 Lotus japonicus HOM05D006361 ORTHO05D007824 2.8e-93 346.3 327 58.4
MD16G1010000 Malus domestica HOM05D006361 ORTHO05D007824 2.8e-93 346.3 340 60.3
arahy.Tifrunner.gnm1.ann1.D0LIF0 Arachis hypogaea HOM05D006361 ORTHO05D007824 4.7e-93 345.5 326 58.9
FvH4_4g35990 Fragaria vesca HOM05D006361 ORTHO05D007824 8.0e-93 344.7 329 59.9
CARHR009260 Cardamine hirsuta HOM05D006361 ORTHO05D007824 1.0e-92 344.4 333 56.2
Sopen01g010510 Solanum pennellii HOM05D006361 ORTHO05D007824 1.0e-92 344.4 335 58.5
CAN.G282.86 Capsicum annuum HOM05D006361 ORTHO05D007824 1.4e-92 344.0 337 57.3
Lalb_Chr02g0143351 Lupinus albus HOM05D006361 ORTHO05D007824 3.1e-92 342.8 339 57.8
QL03p040440 Quercus lobata HOM05D006361 ORTHO05D007824 3.1e-92 342.8 442 47.3
FAN22G0651 Fragaria x ananassa HOM05D006361 ORTHO05D007824 8.9e-92 341.3 329 59.6
Thhalv10008047m.g Eutrema salsugineum HOM05D006361 ORTHO05D007824 1.5e-91 340.5 337 54.9
FAN17G1000 Fragaria x ananassa HOM05D006361 ORTHO05D007824 1.5e-91 340.5 325 59.7
Hma1.2p1_0068F.1_g037190 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 2.6e-91 339.7 276 66.3
RcHm_v2.0_Chr4g0445621 Rosa chinensis HOM05D006361 ORTHO05D007824 4.4e-91 339.0 335 57.3
Peaxi162Scf00705g00017 Petunia axillaris HOM05D006361 ORTHO05D007824 9.8e-91 337.8 335 56.7
ECA233G5480 Erigeron canadensis HOM05D006361 ORTHO05D007824 1.3e-90 337.4 324 59.6
PSO063G1793 Papaver somniferum HOM05D006361 ORTHO05D007824 1.7e-90 337.0 330 57.0
Glyma.20G108700 Glycine max HOM05D006361 ORTHO05D007824 2.2e-90 336.7 326 57.7
FAN07G0576 Fragaria x ananassa HOM05D006361 ORTHO05D007824 3.7e-90 335.9 329 59.0
Nitab4.5_0003889g0010 Nicotiana tabacum HOM05D006361 ORTHO05D007824 1.1e-89 334.3 328 57.9
Carub.0001s0863 Capsella rubella HOM05D006361 ORTHO05D007824 1.9e-89 333.6 350 52.0
Atru.chr11.1031 Acer truncatum HOM05D006361 ORTHO05D007824 2.4e-89 333.2 338 55.9
Sp1g07900 Schrenkiella parvula HOM05D006361 ORTHO05D007824 3.2e-89 332.8 340 55.0
VMungo0720G0403 Vigna mungo HOM05D006361 ORTHO05D007824 9.2e-89 331.3 340 57.6
BcaB03g13282 Brassica carinata HOM05D006361 ORTHO05D007824 1.2e-88 330.9 340 54.7
THA.LOC104815221 Tarenaya hassleriana HOM05D006361 ORTHO05D007824 7.8e-88 328.2 348 53.2
BraA08t35382Z Brassica rapa HOM05D006361 ORTHO05D007824 1.3e-87 327.4 337 55.2
Aa31LG1G5840 Aethionema arabicum HOM05D006361 ORTHO05D007824 1.7e-87 327.0 342 53.2
BcaC07g38489 Brassica carinata HOM05D006361 ORTHO05D007824 6.6e-87 325.1 337 54.3
C08p12590 Brassica napus HOM05D006361 ORTHO05D007824 6.6e-87 325.1 337 54.3
AUR62003478 Chenopodium quinoa HOM05D006361 ORTHO05D007824 1.1e-86 324.3 325 56.3
BolC8t48897H Brassica oleracea HOM05D006361 ORTHO05D007824 2.5e-86 323.2 339 55.2
A08p34700 Brassica napus HOM05D006361 ORTHO05D007824 7.3e-86 321.6 337 54.9
AL1G19780 Arabidopsis lyrata HOM05D006361 ORTHO05D007824 1.6e-85 320.5 339 53.4
Nitab4.5_0000944g0110 Nicotiana tabacum HOM05D006361 ORTHO05D007824 3.6e-85 319.3 343 55.7
HPP92_007296 Vanilla planifolia HOM05D006361 ORTHO05D007824 6.2e-85 318.5 326 54.0
AT1G09290 Arabidopsis thaliana HOM05D006361 ORTHO05D007824 1.4e-84 317.4 337 53.4
Lsat_1_v5_gn_8_33920 Lactuca sativa HOM05D006361 ORTHO05D007824 6.8e-84 315.1 325 56.9
vmacro08586 Vaccinium macrocarpon HOM05D006361 ORTHO05D007824 6.8e-84 315.1 446 46.6
MELO3C022554.2 Cucumis melo HOM05D006361 ORTHO05D007824 1.3e-82 310.8 340 53.2
PSO782G3204 Papaver somniferum HOM05D006361 ORTHO05D007824 1.4e-81 307.4 330 52.7
COL.COLO4_27543 Corchorus olitorius HOM05D006361 ORTHO05D007824 1.9e-81 307.0 274 60.2
EL10Ac6g15395 Beta vulgaris HOM05D006361 ORTHO05D007824 5.4e-81 305.4 331 54.7
Os02g0672400 Oryza sativa ssp. japonica HOM05D006361 ORTHO05D007824 1.6e-80 303.9 328 53.0
Psat6g231640 Pisum sativum HOM05D006361 ORTHO05D007824 1.0e-79 301.2 327 53.2
CDE04G0863 Ceratophyllum demersum HOM05D006361 ORTHO05D007824 1.9e-78 297.0 328 50.9
ATR0807G049 Amborella trichopoda HOM05D006361 ORTHO05D007824 2.1e-77 293.5 337 49.6
arahy.Tifrunner.gnm1.ann1.3EIQ25 Arachis hypogaea HOM05D006361 ORTHO05D007824 6.2e-77 292.0 371 50.7
TPR.G2489 Trifolium pratense HOM05D006361 ORTHO05D007824 1.1e-76 291.2 322 52.2
Medtr1g112360 Medicago truncatula HOM05D006361 ORTHO05D007824 9.9e-75 284.6 322 51.9
AUR62017787 Chenopodium quinoa HOM05D006361 ORTHO05D007824 3.2e-73 279.6 340 49.4
Phvul.007G020000 Phaseolus vulgaris HOM05D006361 ORTHO05D007824 5.1e-71 272.3 295 54.2
Ah.03g147180 Amaranthus hybridus HOM05D006361 ORTHO05D007824 2.8e-69 266.5 339 49.3
Ca_11202_v3 Cicer arietinum L. HOM05D006361 ORTHO05D007824 8.4e-66 255.0 335 46.9
CsaV3_5G012340 Cucumis sativus L. HOM05D006361 ORTHO05D007824 2.8e-61 240.0 268 52.2
Sc11g0003580 Simmondsia chinensis HOM05D006361 ORTHO05D007824 6.2e-61 238.8 235 57.9
SEGI_09761 Sequoiadendron giganteum HOM05D006361 ORTHO05D007824 3.1e-60 236.5 388 38.1
Haze_10736 Corylus avellana HOM05D006361 ORTHO05D007824 3.1e-52 209.9 182 59.9
Actinidia34045 Actinidia chinensis HOM05D006361 ORTHO05D007824 1.9e-46 190.7 136 72.8
Haze_10738 Corylus avellana HOM05D006361 ORTHO05D007824 5.3e-44 182.6 210 51.9
Mapoly0161s0009 Marchantia polymorpha HOM05D006361 ORTHO05D007824 1.1e-41 174.9 367 32.7
arahy.Tifrunner.gnm1.ann1.10LCJA Arachis hypogaea HOM05D006361 ORTHO05D007824 1.9e-41 174.1 307 40.4
Hund12782 Selenicereus undatus HOM05D006361 ORTHO05D007824 1.2e-40 171.4 137 63.5
AagrBONN_evm.TU.Sc2ySwM_228.545 Anthoceros agrestis HOM05D006361 ORTHO05D007824 1.6e-40 171.0 359 34.8
MBI06_g04759_MAGBIO Magnolia biondii HOM05D006361 ORTHO05D007824 6.3e-29 132.5 95 71.6
Actinidia34046 Actinidia chinensis HOM05D006361 ORTHO05D007824 3.2e-25 120.2 83 74.7
Glyma.10G280900 Glycine max HOM05D006361 ORTHO05D007824 2.1e-24 117.5 221 35.3
CBR_g51236 Chara braunii HOM05D006361 ORTHO05D007824 2.3e-23 114.0 459 25.7
Oeu038968.1 Olea europaea HOM05D006361 ORTHO05D007824 1.4e-20 104.8 178 41.0
VMungo0251G1708 Vigna mungo HOM05D006361 ORTHO05D007824 6.9e-20 102.4 123 50.4
Cc00_g30730 Coffea canephora HOM05D006361 ORTHO05D007824 1.2e-19 101.7 81 65.4
Zm00001eb250300 Zea mays HOM05D006361 ORTHO05D007824 3.4e-19 100.1 131 45.0
Pp3c10_230 Physcomitrium patens HOM05D006361 ORTHO05D007824 1.0e-18 98.6 251 30.3
Sabra19G0029800 Salix brachista HOM05D006361 ORTHO05D007824 3.2e-17 93.6 67 70.1
SMO115G0015 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 9.7e-14 82.0 268 28.4
Cc00_g15950 Coffea canephora HOM05D006361 ORTHO05D007824 1.1e-12 78.6 54 70.4
SMO166G0069 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 2.4e-12 77.4 200 30.5
Hma1.2p1_0068F.1_g037180 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 5.3e-12 76.3 57 70.2
Cc00_g35660 Coffea canephora HOM05D006361 ORTHO05D007824 7.0e-12 75.9 79 53.2
VMungo1215G0447 Vigna mungo HOM05D006361 ORTHO05D007824 5.0e-10 69.7 132 37.1
QL03p040408 Quercus lobata HOM05D006361 ORTHO05D007824 1.5e-09 68.2 57 57.9
VMungo0647G2130 Vigna mungo HOM05D004174 ORTHO05D004624 4.2e-09 66.6 127 35.4


User provided reference genes

Program Settings