Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021441 Camellia sinensis var. sinensis HOM05D003990 ORTHO05D004925 1.8e-188 662.5 359 100.0
CSS0010282 Camellia sinensis var. sinensis HOM05D003990 ORTHO05D004925 2.7e-184 648.7 361 98.3
Rhsim02G0251300 Rhododendron simsii HOM05D003990 ORTHO05D004925 1.8e-132 476.5 361 71.7
Peaxi162Scf00102g01878 Petunia axillaris HOM05D003990 ORTHO05D000951 4.2e-129 465.3 302 77.5
Dinv38683 Davidia involucrata HOM05D003990 ORTHO05D001284 7.2e-129 464.5 290 79.7
Hma1.2p1_0212F.1_g090230 Hydrangea macrophylla HOM05D003990 ORTHO05D004925 9.4e-129 464.2 299 79.3
Lsat_1_v5_gn_3_13681 Lactuca sativa HOM05D003990 ORTHO05D004925 1.2e-128 463.8 309 75.4
Sabra03G0105900 Salix brachista HOM05D003990 ORTHO05D004925 1.8e-127 459.9 293 78.5
Solyc08g008530.1 Solanum lycopersicum HOM05D003990 ORTHO05D004925 2.3e-127 459.5 364 68.1
Oeu022039.1 Olea europaea HOM05D003990 ORTHO05D004925 3.0e-127 459.1 361 67.6
Aqoxy7G00029 Aquilegia oxysepala HOM05D003990 ORTHO05D004925 6.7e-127 458.0 309 76.1
Potri.003G145700 Populus trichocarpa HOM05D003990 ORTHO05D004925 2.0e-126 456.4 298 77.5
Cfa011935 Carpinus fangiana HOM05D003990 ORTHO05D004925 2.6e-126 456.1 294 78.2
CiPaw.12G078400 Carya illinoinensis HOM05D003990 ORTHO05D004925 2.6e-126 456.1 366 66.1
PGSC0003DMG400005851 Solanum tuberosum HOM05D003990 ORTHO05D004925 5.7e-126 454.9 364 67.3
FAN13G1570 Fragaria x ananassa HOM05D003990 ORTHO05D004925 1.3e-125 453.8 313 74.4
Ciclev10020878m.g Citrus clementina HOM05D003990 ORTHO05D004925 1.7e-125 453.4 283 79.2
TAR629G1984 Trochodendron aralioides HOM05D003990 ORTHO05D004925 1.7e-125 453.4 310 75.8
Manes.11G125600 Manihot esculenta HOM05D003990 ORTHO05D004925 6.3e-125 451.4 291 77.7
Sopen08g004380 Solanum pennellii HOM05D003990 ORTHO05D004925 1.8e-124 449.9 302 75.8
ECA246G0738 Erigeron canadensis HOM05D003273 ORTHO05D004023 5.3e-124 448.4 297 74.4
Atru.chr9.1910 Acer truncatum HOM05D003990 ORTHO05D004925 9.1e-124 447.6 315 74.9
RcHm_v2.0_Chr7g0186781 Rosa chinensis HOM05D003990 ORTHO05D004925 4.5e-123 445.3 288 77.4
Sc01g0010590 Simmondsia chinensis HOM05D003990 ORTHO05D004925 7.7e-123 444.5 370 64.6
Prupe.5G128500 Prunus persica HOM05D003990 ORTHO05D004925 2.9e-122 442.6 286 78.3
TWI60G1311 Tripterygium wilfordii HOM05D003990 ORTHO05D004925 6.5e-122 441.4 316 73.4
Cc08_g16660 Coffea canephora HOM05D003990 ORTHO05D004925 1.5e-121 440.3 378 64.3
DCAR_009092 Daucus carota HOM05D003990 ORTHO05D004925 1.5e-121 440.3 304 72.7
HanXRQChr06g0166861 Helianthus annuus HOM05D003990 ORTHO05D004925 3.2e-121 439.1 309 70.2
Lalb_Chr17g0338551 Lupinus albus HOM05D003990 ORTHO05D004925 3.2e-121 439.1 301 75.1
Eucgr.D01688 Eucalyptus grandis HOM05D003990 ORTHO05D004925 4.2e-121 438.7 372 64.2
MD06G1117400 Malus domestica HOM05D003990 ORTHO05D004925 4.2e-121 438.7 288 76.4
Cpa.g.sc175.15 Carica papaya HOM05D003990 ORTHO05D004925 9.4e-121 437.6 285 76.5
Haze_14077 Corylus avellana HOM05D003990 ORTHO05D004925 9.4e-121 437.6 270 79.6
Nitab4.5_0001962g0040 Nicotiana tabacum HOM05D003990 ORTHO05D004925 1.0e-119 434.1 275 76.7
Nitab4.5_0000673g0130 Nicotiana tabacum HOM05D003990 ORTHO05D004925 1.4e-119 433.7 280 75.7
CAN.G792.28 Capsicum annuum HOM05D003990 ORTHO05D004925 1.8e-119 433.3 301 72.1
QL02p029212 Quercus lobata HOM05D003990 ORTHO05D004925 2.0e-118 429.9 292 73.6
MSTRG.13719 Avicennia marina HOM05D003990 ORTHO05D004925 9.1e-116 421.0 289 72.7
CANSAT21G0847 Cannabis sativa HOM05D003990 ORTHO05D004925 1.2e-115 420.6 297 71.7
MELO3C013779.2 Cucumis melo HOM05D003990 ORTHO05D004925 1.2e-115 420.6 312 68.3
Gohir.D03G086700 Gossypium hirsutum HOM05D003990 ORTHO05D004925 1.6e-115 420.2 309 68.9
PSO384G4439 Papaver somniferum HOM05D003990 ORTHO05D004925 1.6e-115 420.2 313 68.1
Gorai.003G075400 Gossypium raimondii HOM05D003990 ORTHO05D004925 2.0e-115 419.9 309 68.9
Lj8A201T86 Lonicera japonica HOM05D003990 ORTHO05D004925 2.0e-115 419.9 266 79.3
CsaV3_3G000920 Cucumis sativus L. HOM05D003990 ORTHO05D004925 3.5e-115 419.1 288 71.2
Carub.0006s2953 Capsella rubella HOM05D003990 ORTHO05D004925 1.0e-114 417.5 316 69.6
MBI12_g30966_MAGBIO Magnolia biondii HOM05D003990 ORTHO05D004925 1.3e-114 417.2 381 59.8
Gohir.A02G097800 Gossypium hirsutum HOM05D003990 ORTHO05D004925 2.2e-114 416.4 292 70.9
COL.COLO4_10785 Corchorus olitorius HOM05D003990 ORTHO05D004925 3.8e-114 415.6 301 68.8
Lj2g0026928 Lotus japonicus HOM05D003990 ORTHO05D004925 1.9e-113 413.3 320 67.2
PSO135G0880 Papaver somniferum HOM05D003990 ORTHO05D004925 2.5e-113 412.9 313 66.8
AT4G10750 Arabidopsis thaliana HOM05D003990 ORTHO05D004925 9.4e-113 411.0 314 68.8
Sed0016376 Sechium edule HOM05D003990 ORTHO05D004925 9.4e-113 411.0 301 68.8
Ah.12g053140 Amaranthus hybridus HOM05D003990 ORTHO05D004925 2.1e-112 409.8 300 70.3
Sp6g06750 Schrenkiella parvula HOM05D003990 ORTHO05D004925 2.1e-112 409.8 319 68.0
Thhalv10029450m.g Eutrema salsugineum HOM05D003990 ORTHO05D004925 2.7e-112 409.5 317 67.5
THA.LOC104813054 Tarenaya hassleriana HOM05D003990 ORTHO05D004925 2.7e-112 409.5 308 69.2
Duzib205G1059 Durio zibethinus HOM05D003990 ORTHO05D004925 3.6e-112 409.1 292 69.9
BcaB01g01511 Brassica carinata HOM05D003990 ORTHO05D004925 4.7e-112 408.7 317 67.2
A09p28480 Brassica napus HOM05D003990 ORTHO05D004925 4.7e-112 408.7 317 66.9
BraA09t38413Z Brassica rapa HOM05D003990 ORTHO05D004925 4.7e-112 408.7 317 67.2
Nn1g00366 Nelumbo nucifera HOM05D003990 ORTHO05D004925 1.0e-111 407.5 301 71.4
AL6G44800 Arabidopsis lyrata HOM05D003990 ORTHO05D004925 1.8e-111 406.8 314 68.5
BcaC04g21069 Brassica carinata HOM05D003990 ORTHO05D004925 2.3e-111 406.4 317 66.9
C09p36050 Brassica napus HOM05D003990 ORTHO05D004925 2.3e-111 406.4 317 66.9
BolC9t56444H Brassica oleracea HOM05D003990 ORTHO05D004925 2.3e-111 406.4 317 66.9
CARHR255860 Cardamine hirsuta HOM05D003990 ORTHO05D004925 3.0e-111 406.0 317 67.8
Thecc.03G222400 Theobroma cacao HOM05D003990 ORTHO05D004925 1.2e-110 404.1 311 65.9
TPR.G36963 Trifolium pratense HOM05D003990 ORTHO05D004925 3.4e-110 402.5 293 69.3
Aa31LG9G11320 Aethionema arabicum HOM05D003990 ORTHO05D004925 4.4e-110 402.1 302 69.5
CDE04G2232 Ceratophyllum demersum HOM05D003990 ORTHO05D004925 1.3e-109 400.6 278 69.1
Cfa011937 Carpinus fangiana HOM05D003990 ORTHO05D004925 1.7e-109 400.2 276 73.6
Medtr1g031790 Medicago truncatula HOM05D003990 ORTHO05D004925 6.3e-109 398.3 301 66.8
VMungo1215G2928 Vigna mungo HOM05D003990 ORTHO05D004925 2.3e-106 389.8 310 64.5
FvH4_5g11021 Fragaria vesca HOM05D003990 ORTHO05D004925 8.6e-106 387.9 294 69.7
Phvul.003G021600 Phaseolus vulgaris HOM05D003990 ORTHO05D004925 5.5e-105 385.2 313 62.6
Oeu022040.1 Olea europaea HOM05D003990 ORTHO05D004925 8.0e-104 381.3 260 71.2
Duzib084G0313 Durio zibethinus HOM05D003990 ORTHO05D004925 4.0e-103 379.0 250 70.0
QL02p029171 Quercus lobata HOM05D003990 ORTHO05D004925 7.5e-102 374.8 262 69.1
CiPaw.11G113600 Carya illinoinensis HOM05D003990 ORTHO05D004925 1.7e-101 373.6 265 71.3
HPP92_008886 Vanilla planifolia HOM05D003990 ORTHO05D004925 3.1e-100 369.4 316 62.3
vmacro11510 Vaccinium macrocarpon HOM05D003990 ORTHO05D004925 9.2e-100 367.9 358 60.9
ATR0620G013 Amborella trichopoda HOM05D003990 ORTHO05D004925 2.0e-99 366.7 291 64.6
COL.COLO4_10784 Corchorus olitorius HOM05D003990 ORTHO05D004925 2.7e-99 366.3 265 66.8
Os09g0529900 Oryza sativa ssp. japonica HOM05D003990 ORTHO05D004925 3.3e-97 359.4 314 58.9
QL02p029158 Quercus lobata HOM05D003990 ORTHO05D004925 1.4e-95 354.0 263 65.4
AUR62019907 Chenopodium quinoa HOM05D003990 ORTHO05D004925 3.1e-95 352.8 251 71.3
Ah.12g053130 Amaranthus hybridus HOM05D003990 ORTHO05D004925 2.0e-94 350.1 267 64.8
EL10Ac5g12452 Beta vulgaris HOM05D003990 ORTHO05D004925 5.8e-94 348.6 271 63.8
AUR62019906 Chenopodium quinoa HOM05D003990 ORTHO05D004925 7.5e-94 348.2 267 64.4
Zm00001eb103220 Zea mays HOM05D003990 ORTHO05D004925 9.8e-94 347.8 313 56.5
AUR62007043 Chenopodium quinoa HOM05D003990 ORTHO05D004925 1.3e-93 347.4 252 69.4
EL10Ac5g12450 Beta vulgaris HOM05D003990 ORTHO05D004925 1.7e-93 347.1 249 71.9
Sc01g0010580 Simmondsia chinensis HOM05D003990 ORTHO05D004925 1.7e-93 347.1 260 66.9
AUR62007042 Chenopodium quinoa HOM05D003990 ORTHO05D004925 2.9e-93 346.3 267 64.4
Ca_12579_v3 Cicer arietinum L. HOM05D003990 ORTHO05D004925 2.5e-89 333.2 247 68.0
Psat6g044760 Pisum sativum HOM05D003990 ORTHO05D004925 2.5e-89 333.2 252 66.7
SEGI_30656 Sequoiadendron giganteum HOM05D003990 ORTHO05D004925 8.0e-88 328.2 260 61.9
Migut.O00797 Erythranthe guttata HOM05D003990 ORTHO05D004925 1.4e-87 327.4 257 68.5
arahy.Tifrunner.gnm1.ann1.LQZ0GD Arachis hypogaea HOM05D003990 ORTHO05D004925 1.8e-87 327.0 260 58.8
arahy.Tifrunner.gnm1.ann1.ZCAA4H Arachis hypogaea HOM05D003990 ORTHO05D004925 1.8e-87 327.0 260 58.8
COL.COLO4_10783 Corchorus olitorius HOM05D003990 ORTHO05D004925 3.1e-87 326.2 225 69.3
A01p15340 Brassica napus HOM05D003990 ORTHO05D004925 2.9e-85 319.7 266 57.9
Thhalv10026820m.g Eutrema salsugineum HOM05D003990 ORTHO05D004925 2.9e-85 319.7 257 59.1
BolC1t01855H Brassica oleracea HOM05D003990 ORTHO05D004925 8.3e-85 318.2 266 57.5
THA.LOC104815209 Tarenaya hassleriana HOM05D003990 ORTHO05D004925 2.4e-84 316.6 272 57.7
C01p19290 Brassica napus HOM05D003990 ORTHO05D004925 6.0e-83 312.0 257 58.4
arahy.Tifrunner.gnm1.ann1.3SR05H Arachis hypogaea HOM05D003990 ORTHO05D004925 3.0e-82 309.7 268 55.2
arahy.Tifrunner.gnm1.ann1.UPJ447 Arachis hypogaea HOM05D003990 ORTHO05D004925 3.0e-82 309.7 268 55.2
arahy.Tifrunner.gnm1.ann1.IT3SMZ Arachis hypogaea HOM05D003990 ORTHO05D004925 5.1e-82 308.9 264 55.3
arahy.Tifrunner.gnm1.ann1.Y0R09G Arachis hypogaea HOM05D003990 ORTHO05D004925 5.1e-82 308.9 264 55.3
AL7G29210 Arabidopsis lyrata HOM05D003990 ORTHO05D004925 1.1e-81 307.8 257 57.6
BcaNung01112 Brassica carinata HOM05D003990 ORTHO05D004925 9.5e-81 304.7 265 55.1
BolC1t01856H Brassica oleracea HOM05D003990 ORTHO05D004925 1.6e-80 303.9 272 54.0
Aa31LG6G7280 Aethionema arabicum HOM05D003990 ORTHO05D004925 2.8e-80 303.1 273 55.3
BraA01t01479Z Brassica rapa HOM05D003990 ORTHO05D004925 2.8e-80 303.1 269 54.6
BcaC09g50914 Brassica carinata HOM05D003990 ORTHO05D004925 1.8e-79 300.4 269 54.3
Carub.0007s1702 Capsella rubella HOM05D003990 ORTHO05D004925 3.1e-79 299.7 255 57.6
C01p19300 Brassica napus HOM05D003990 ORTHO05D004925 5.2e-79 298.9 269 53.9
A01p15350 Brassica napus HOM05D003990 ORTHO05D004925 8.9e-79 298.1 269 54.3
Pp3c17_4700 Physcomitrium patens HOM05D003990 ORTHO05D004925 1.3e-77 294.3 267 54.7
BraA01t01478Z Brassica rapa HOM05D003990 ORTHO05D004925 4.9e-77 292.4 266 55.6
AagrBONN_evm.TU.Sc2ySwM_117.985 Anthoceros agrestis HOM05D003990 ORTHO05D004925 2.1e-75 287.0 250 58.0
BcaC09g50915 Brassica carinata HOM05D003990 ORTHO05D004925 7.8e-75 285.0 231 58.0
Mapoly0141s0022 Marchantia polymorpha HOM05D003990 ORTHO05D004925 1.0e-74 284.6 280 55.7
Haze_09152 Corylus avellana HOM05D003990 ORTHO05D004925 3.9e-74 282.7 193 73.1
Glyma.07G166800 Glycine max HOM05D003990 ORTHO05D004925 3.1e-71 273.1 176 75.0
CARHR006280 Cardamine hirsuta HOM05D003990 ORTHO05D004925 6.8e-71 271.9 230 55.7
Thhalv10027122m.g Eutrema salsugineum HOM05D003990 ORTHO05D004925 5.4e-68 262.3 258 51.6
Sc16g0011220 Simmondsia chinensis HOM05D003990 ORTHO05D004925 7.1e-68 261.9 241 55.2
arahy.Tifrunner.gnm1.ann1.UE00R2 Arachis hypogaea HOM05D003990 ORTHO05D004925 1.0e-66 258.1 249 53.4
Thecc.03G222500 Theobroma cacao HOM05D003990 ORTHO05D004925 1.3e-66 257.7 169 72.8
arahy.Tifrunner.gnm1.ann1.VJUY72 Arachis hypogaea HOM05D003990 ORTHO05D004925 3.9e-66 256.1 264 50.0
arahy.Tifrunner.gnm1.ann1.E0UK9T Arachis hypogaea HOM05D003990 ORTHO05D004925 5.1e-66 255.8 264 50.0
CARHR006270 Cardamine hirsuta HOM05D003990 ORTHO05D004925 1.5e-65 254.2 229 54.1
unitig_52.g17196 Utricularia gibba HOM05D003990 ORTHO05D004925 1.6e-64 250.8 194 64.4
QL02p029191 Quercus lobata HOM05D003990 ORTHO05D004925 1.9e-60 237.3 403 39.0
CDE07G1159 Ceratophyllum demersum HOM05D003990 ORTHO05D004925 3.2e-60 236.5 260 51.2
Zm00001eb207470 Zea mays HOM05D003990 ORTHO05D004925 4.3e-57 226.1 249 51.8
arahy.Tifrunner.gnm1.ann1.QV8INP Arachis hypogaea HOM05D003990 ORTHO05D004925 6.9e-55 218.8 252 47.6
CARHR231480 Cardamine hirsuta HOM05D003990 ORTHO05D004925 2.4e-52 210.3 179 56.4
Sp7g22040 Schrenkiella parvula HOM05D003990 ORTHO05D004925 2.4e-52 210.3 179 55.3
Potri.001G084900 Populus trichocarpa HOM05D003990 ORTHO05D004925 2.3e-50 203.8 121 80.2
FAN18G2679 Fragaria x ananassa HOM05D003990 ORTHO05D004925 1.9e-49 200.7 145 70.3
AT4G24080 Arabidopsis thaliana HOM05D003990 ORTHO05D004925 2.4e-47 193.7 166 55.4
Aa31LG6G7290 Aethionema arabicum HOM05D003990 ORTHO05D004925 2.9e-45 186.8 156 59.0
Zm00001eb366680 Zea mays HOM05D003990 ORTHO05D004925 1.0e-42 178.3 249 46.6
Hma1.2p1_0440F.1_g153760 Hydrangea macrophylla HOM05D003990 ORTHO05D004925 3.9e-42 176.4 199 53.3
PRCOL_00003301 Prasinoderma coloniale HOM05D003990 ORTHO05D004925 7.1e-36 155.6 233 38.6
CAN.G479.14 Capsicum annuum HOM05D003990 ORTHO05D004925 8.7e-34 148.7 121 62.8
AagrBONN_evm.TU.Sc2ySwM_228.2729 Anthoceros agrestis HOM05D003990 ORTHO05D004925 9.7e-33 145.2 224 42.4
Haze_16436 Corylus avellana HOM05D003990 ORTHO05D004925 1.3e-29 134.8 195 45.1
Zm00001eb314200 Zea mays HOM05D003990 ORTHO05D004925 4.2e-28 129.8 242 34.3
FAN18G2309 Fragaria x ananassa HOM05D003990 ORTHO05D004925 8.8e-26 122.1 82 78.0
arahy.Tifrunner.gnm1.ann1.R8SYM2 Arachis hypogaea HOM05D003990 ORTHO05D004925 1.7e-24 117.9 122 52.5
Thhalv10027505m.g Eutrema salsugineum HOM05D003990 ORTHO05D004925 9.1e-23 112.1 110 50.0
arahy.Tifrunner.gnm1.ann1.S5BUNY Arachis hypogaea HOM05D003990 ORTHO05D004925 3.2e-20 103.6 65 76.9
Cre01.g015550 Chlamydomonas reinhardtii HOM05D003990 ORTHO05D004925 3.2e-20 103.6 181 36.5
Duzib068G0872 Durio zibethinus HOM05D003990 ORTHO05D004925 3.2e-20 103.6 87 58.6
Migut.E00635 Erythranthe guttata HOM05D003990 ORTHO05D004925 3.2e-20 103.6 94 60.6
Cfa021766 Carpinus fangiana HOM05D003990 ORTHO05D004925 7.4e-17 92.4 225 29.3
Hma1.2p1_0212F.1_g090250 Hydrangea macrophylla HOM05D003990 ORTHO05D004925 7.4e-17 92.4 59 78.0
arahy.Tifrunner.gnm1.ann1.228U7D Arachis hypogaea HOM05D003990 ORTHO05D004925 1.7e-16 91.3 68 67.6
Prupe.2G052300 Prunus persica HOM05D003990 ORTHO05D004925 2.0e-14 84.3 66 59.1
EL10Ac6g14266 Beta vulgaris HOM05D003990 ORTHO05D004925 2.6e-14 84.0 71 60.6
unitig_52.g17197 Utricularia gibba HOM05D003990 ORTHO05D004925 1.3e-13 81.6 43 88.4
QL02p029165 Quercus lobata HOM05D003990 ORTHO05D010865 8.5e-13 79.0 58 69.0
AagrBONN_evm.TU.Sc2ySwM_344.3329 Anthoceros agrestis HOM05D003990 ORTHO05D071624 3.0e-10 70.5 269 27.1
QL02p029160 Quercus lobata HOM05D003990 ORTHO05D004925 2.6e-09 67.4 61 55.7
AT4G24070 Arabidopsis thaliana HOM05D003990 ORTHO05D004925 5.7e-09 66.2 63 54.0
VMungo0647G2082 Vigna mungo HOM05D003990 ORTHO05D004925 1.3e-08 65.1 54 55.6


User provided reference genes

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